BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004438
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593528.1| Splicing factor U2af large subunit B [Medica...   191   2e-83
gb|ABN08613.1| RNA-binding region RNP-1 (RNA recognition motif) ...   191   2e-83
gb|AFK48456.1| unknown [Lotus japonicus]                              188   6e-78
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-41
ref|XP_002267854.2| PREDICTED: splicing factor U2af large subuni...   170   2e-41

>ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355482576|gb|AES63779.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 593

 Score =  191 bits (485), Expect(2) = 2e-83
 Identities = 97/112 (86%), Positives = 102/112 (91%)
 Frame = -1

Query: 336 GQVPSIAHMIQGTTQNLPPFGISQIGIGALSLMQVQPMTQQATRHARRVYVGGLPPLTNE 157
           GQ+P IAHMIQG TQN  P+GISQIG  ALSLMQVQPMTQQATRHARRVYVGGLPP  NE
Sbjct: 134 GQMPGIAHMIQGATQNFSPYGISQIG--ALSLMQVQPMTQQATRHARRVYVGGLPPFANE 191

Query: 156 QTIAAFFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAFVEMRTVEEASNAMA 1
           Q+IA+FFS VM AIGGNSAG+GDSVVNVYINHEKKFAFVEMRTVEEASNAMA
Sbjct: 192 QSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVEMRTVEEASNAMA 243



 Score =  145 bits (365), Expect(2) = 2e-83
 Identities = 77/134 (57%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
 Frame = -2

Query: 797 MSDIENHDSLRGGSSPDKPSSRGSAHESMRMRKRDGDRKTFHDRG--RRDYKYGGFRGRD 624
           MSDI+NH +  G SSPDKPSSRGS H+S RMR+RDGDRK+FHD     RD KY GF+GR 
Sbjct: 1   MSDIDNH-AYHGASSPDKPSSRGSGHDSTRMRRRDGDRKSFHDHRDRHRDDKYEGFKGRG 59

Query: 623 NYDGYNRHRGRDYDRHNFGGRDGDTRHKYGXXXXXXXXXXXXXXXXXXXXXXXXXRTSGF 444
            YD YNR RGRDYDRHN   RD DTR++YG                         RTSGF
Sbjct: 60  KYDSYNRQRGRDYDRHNDYDRDRDTRNRYGAHSKRSRRESRSRSRSRSPSQSEGKRTSGF 119

Query: 443 DMAPSAAGVTPAVS 402
           DMAP A GVTP VS
Sbjct: 120 DMAPPATGVTPTVS 133


>gb|ABN08613.1| RNA-binding region RNP-1 (RNA recognition motif) [Medicago
           truncatula]
          Length = 257

 Score =  191 bits (485), Expect(2) = 2e-83
 Identities = 97/112 (86%), Positives = 102/112 (91%)
 Frame = -1

Query: 336 GQVPSIAHMIQGTTQNLPPFGISQIGIGALSLMQVQPMTQQATRHARRVYVGGLPPLTNE 157
           GQ+P IAHMIQG TQN  P+GISQIG  ALSLMQVQPMTQQATRHARRVYVGGLPP  NE
Sbjct: 134 GQMPGIAHMIQGATQNFSPYGISQIG--ALSLMQVQPMTQQATRHARRVYVGGLPPFANE 191

Query: 156 QTIAAFFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAFVEMRTVEEASNAMA 1
           Q+IA+FFS VM AIGGNSAG+GDSVVNVYINHEKKFAFVEMRTVEEASNAMA
Sbjct: 192 QSIASFFSQVMIAIGGNSAGSGDSVVNVYINHEKKFAFVEMRTVEEASNAMA 243



 Score =  145 bits (365), Expect(2) = 2e-83
 Identities = 77/134 (57%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
 Frame = -2

Query: 797 MSDIENHDSLRGGSSPDKPSSRGSAHESMRMRKRDGDRKTFHDRG--RRDYKYGGFRGRD 624
           MSDI+NH +  G SSPDKPSSRGS H+S RMR+RDGDRK+FHD     RD KY GF+GR 
Sbjct: 1   MSDIDNH-AYHGASSPDKPSSRGSGHDSTRMRRRDGDRKSFHDHRDRHRDDKYEGFKGRG 59

Query: 623 NYDGYNRHRGRDYDRHNFGGRDGDTRHKYGXXXXXXXXXXXXXXXXXXXXXXXXXRTSGF 444
            YD YNR RGRDYDRHN   RD DTR++YG                         RTSGF
Sbjct: 60  KYDSYNRQRGRDYDRHNDYDRDRDTRNRYGAHSKRSRRESRSRSRSRSPSQSEGKRTSGF 119

Query: 443 DMAPSAAGVTPAVS 402
           DMAP A GVTP VS
Sbjct: 120 DMAPPATGVTPTVS 133


>gb|AFK48456.1| unknown [Lotus japonicus]
          Length = 527

 Score =  188 bits (477), Expect(2) = 6e-78
 Identities = 95/112 (84%), Positives = 100/112 (89%)
 Frame = -1

Query: 336 GQVPSIAHMIQGTTQNLPPFGISQIGIGALSLMQVQPMTQQATRHARRVYVGGLPPLTNE 157
           GQ   I H+ QGT QN   FGISQ  IGALSLMQVQPMTQQATRHARRVY+GGLPPLTNE
Sbjct: 133 GQTLGINHLNQGTAQNFSLFGISQPQIGALSLMQVQPMTQQATRHARRVYIGGLPPLTNE 192

Query: 156 QTIAAFFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAFVEMRTVEEASNAMA 1
           Q+IA FFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAF+EMRTVEEASNAM+
Sbjct: 193 QSIATFFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAFLEMRTVEEASNAMS 244



 Score =  130 bits (326), Expect(2) = 6e-78
 Identities = 71/134 (52%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
 Frame = -2

Query: 797 MSDIENHDSLRGGS--SPDKPSSRGSAHESMRMRKRDGDRKTFHDRGRRDYKYGGFRGRD 624
           MSD+ENH   RG S  SPDK +S GS  ES RMRK+DG+R+ FHDR  RDYK GGF GRD
Sbjct: 1   MSDVENHTFHRGSSKSSPDKSNSHGSGRESTRMRKQDGERRDFHDRHHRDYKDGGFNGRD 60

Query: 623 NYDGYNRHRGRDYDRHNFGGRDGDTRHKYGXXXXXXXXXXXXXXXXXXXXXXXXXRTSGF 444
            Y+ YNRHR RDYDRHN   +DG+ RHKY                          R SGF
Sbjct: 61  RYNSYNRHRSRDYDRHNDRVKDGERRHKY--EAHSKRSRGESRSPSRSPSRSESKRVSGF 118

Query: 443 DMAPSAAGVTPAVS 402
           DMAP +A  T AVS
Sbjct: 119 DMAPPSADGTSAVS 132


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  152 bits (383), Expect(2) = 2e-41
 Identities = 79/112 (70%), Positives = 87/112 (77%)
 Frame = -1

Query: 336 GQVPSIAHMIQGTTQNLPPFGISQIGIGALSLMQVQPMTQQATRHARRVYVGGLPPLTNE 157
           GQ+      I G   N+ P G SQ   GAL +M VQ MTQQATRHARRVYVGGLPP  NE
Sbjct: 158 GQIAGTTPPIPGMFPNMFPLGTSQ-QFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 216

Query: 156 QTIAAFFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAFVEMRTVEEASNAMA 1
           Q++A FFS VM AIGGN+AG GD+VVNVYINHEKKFAFVEMR+VEEASNAMA
Sbjct: 217 QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA 268



 Score = 44.3 bits (103), Expect(2) = 2e-41
 Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
 Frame = -2

Query: 749 DKPSSRGSAHESMRMRKRDGDRKTFHDRGR---RDYKYGGFRGRDNYDGYNRHRGRDYDR 579
           D+   R    E  R R R+ DR    DR R   RD      RGRD  D  + +R RDYDR
Sbjct: 36  DRKRDRDKDREKSRGRDRERDRDKDSDRHRDRHRDCSERRDRGRDRDDD-DYYRSRDYDR 94

Query: 578 HNFGGRDGDTRHKYGXXXXXXXXXXXXXXXXXXXXXXXXXRTSGFDMAPSAAGVTP 411
                RD + RH+                           R SGFDMAP ++ + P
Sbjct: 95  RRDYDRDSEDRHR----------RLSRSRSKGRSEHRSSKRMSGFDMAPPSSAILP 140


>ref|XP_002267854.2| PREDICTED: splicing factor U2af large subunit B-like, partial
           [Vitis vinifera]
          Length = 410

 Score =  170 bits (431), Expect(2) = 2e-41
 Identities = 86/112 (76%), Positives = 95/112 (84%)
 Frame = -1

Query: 336 GQVPSIAHMIQGTTQNLPPFGISQIGIGALSLMQVQPMTQQATRHARRVYVGGLPPLTNE 157
           G++P +  M+ G  QN+ PFG +Q+G  AL LM VQ MTQQATRHARRVYVGGLPPL NE
Sbjct: 63  GELPGVPQMVPGMIQNMFPFGATQLG--ALPLMPVQAMTQQATRHARRVYVGGLPPLANE 120

Query: 156 QTIAAFFSHVMTAIGGNSAGAGDSVVNVYINHEKKFAFVEMRTVEEASNAMA 1
           QTIA FFS VMTAIGGNSAG GD+VVNVYINHEKKFAFVEMR+VEEASNAMA
Sbjct: 121 QTIATFFSQVMTAIGGNSAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMA 172



 Score = 25.4 bits (54), Expect(2) = 2e-41
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 455 TSGFDMAPSAAGVTPAVS 402
           TSGFDMAP  A + P  +
Sbjct: 43  TSGFDMAPPVAALLPGAA 60