BLASTX nr result

ID: Glycyrrhiza24_contig00004429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004429
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521512.1| PREDICTED: uncharacterized protein At3g58460...   298   3e-79
ref|XP_003553633.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   286   2e-75
ref|XP_003638088.1| hypothetical protein MTR_118s0012 [Medicago ...   268   6e-70
ref|XP_002531598.1| Rhomboid protein, putative [Ricinus communis...   241   6e-62
ref|XP_002309277.1| predicted protein [Populus trichocarpa] gi|2...   235   4e-60

>ref|XP_003521512.1| PREDICTED: uncharacterized protein At3g58460-like [Glycine max]
          Length = 414

 Score =  298 bits (764), Expect = 3e-79
 Identities = 147/170 (86%), Positives = 153/170 (90%)
 Frame = +2

Query: 2   LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIEGSSWLSSCVRRPKFI 181
           LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIE SSW SSCVRRPKFI
Sbjct: 188 LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIESSSWFSSCVRRPKFI 247

Query: 182 VCTGGNPSGYIPTHTSQNSTTGGILSGNIWRNLSSLMPQREASAQSVEDSRFPGRGRTLA 361
           VCTGGNPSGYIPTHTSQNSTT G+LSGN+WRNLSS MPQRE SAQS EDSRFPGRGRTL 
Sbjct: 248 VCTGGNPSGYIPTHTSQNSTTSGLLSGNVWRNLSSFMPQREVSAQSTEDSRFPGRGRTLG 307

Query: 362 SDQAQMASGLHSDSNLQARLLEDSSPSHPLESAILSTTQRSSEGRHSVDN 511
           + Q Q AS LHSDSNLQARLLEDSSP+ PL+S+  S  QR SEGRHSVDN
Sbjct: 308 AVQGQTASHLHSDSNLQARLLEDSSPNSPLDSSTPSNPQRLSEGRHSVDN 357


>ref|XP_003553633.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At3g58460-like [Glycine max]
          Length = 415

 Score =  286 bits (731), Expect = 2e-75
 Identities = 142/166 (85%), Positives = 149/166 (89%)
 Frame = +2

Query: 2   LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIEGSSWLSSCVRRPKFI 181
           LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIE SSWLSSCVRRPKFI
Sbjct: 188 LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIESSSWLSSCVRRPKFI 247

Query: 182 VCTGGNPSGYIPTHTSQNSTTGGILSGNIWRNLSSLMPQREASAQSVEDSRFPGRGRTLA 361
           VCTGGNPSGYIPT TSQNSTT G+LSGNIWRNLSS MPQRE SAQS ED RFPGRGRTL 
Sbjct: 248 VCTGGNPSGYIPTQTSQNSTTSGLLSGNIWRNLSSFMPQREVSAQSTEDIRFPGRGRTLG 307

Query: 362 SDQAQMASGLHSDSNLQARLLEDSSPSHPLESAILSTTQRSSEGRH 499
           + Q Q AS LHSDSNLQARLLEDSSP+ PL+S+  S TQ+ SEGR+
Sbjct: 308 AVQGQTASHLHSDSNLQARLLEDSSPNSPLDSSTPSNTQQLSEGRY 353


>ref|XP_003638088.1| hypothetical protein MTR_118s0012 [Medicago truncatula]
           gi|355504023|gb|AES85226.1| hypothetical protein
           MTR_118s0012 [Medicago truncatula]
          Length = 403

 Score =  268 bits (684), Expect = 6e-70
 Identities = 139/172 (80%), Positives = 146/172 (84%), Gaps = 2/172 (1%)
 Frame = +2

Query: 2   LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIEGSSWLSSCVRRPKFI 181
           LVVFQLLMQNVSLLGHL GI+SGFAYT+GLFNFLIPGTSFYSSIE SSWLSSCVRRPKFI
Sbjct: 182 LVVFQLLMQNVSLLGHLSGIVSGFAYTFGLFNFLIPGTSFYSSIEASSWLSSCVRRPKFI 241

Query: 182 VCTGGNPSGYIPTHTSQNSTTGGILSGNIWRNLSSLMPQREASA--QSVEDSRFPGRGRT 355
           VCTGGNPSGYIPT+TS  STT GI SGNIWRNLSSLMPQRE S   QSVEDSRFPGRGRT
Sbjct: 242 VCTGGNPSGYIPTNTSSYSTTSGIFSGNIWRNLSSLMPQREVSTQPQSVEDSRFPGRGRT 301

Query: 356 LASDQAQMASGLHSDSNLQARLLEDSSPSHPLESAILSTTQRSSEGRHSVDN 511
           LA+ Q Q ASG H DSNLQARLLED+SP+H  + AILST       RH VDN
Sbjct: 302 LAAAQGQNASGFHPDSNLQARLLEDNSPNHLSDPAILST-------RHPVDN 346


>ref|XP_002531598.1| Rhomboid protein, putative [Ricinus communis]
           gi|223528794|gb|EEF30801.1| Rhomboid protein, putative
           [Ricinus communis]
          Length = 397

 Score =  241 bits (615), Expect = 6e-62
 Identities = 118/164 (71%), Positives = 136/164 (82%)
 Frame = +2

Query: 2   LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIEGSSWLSSCVRRPKFI 181
           LVVFQLLM NVSLLGHLCGILSGFAYTYGLFNFL+PG+SFYSSIE SSWLSSCVRRPKFI
Sbjct: 182 LVVFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGSSFYSSIEASSWLSSCVRRPKFI 241

Query: 182 VCTGGNPSGYIPTHTSQNSTTGGILSGNIWRNLSSLMPQREASAQSVEDSRFPGRGRTLA 361
           +CTGGNP+ YIPT++SQN  TGG+ SGNIWRNLSS MPQRE S+QS ED+RFPGRGRTL+
Sbjct: 242 MCTGGNPTAYIPTYSSQNMNTGGLFSGNIWRNLSSWMPQRETSSQSTEDNRFPGRGRTLS 301

Query: 362 SDQAQMASGLHSDSNLQARLLEDSSPSHPLESAILSTTQRSSEG 493
           S  +Q    + SDSNLQARLL++S+ +     A   T  R ++G
Sbjct: 302 STGSQTIPAVSSDSNLQARLLDNSNSNLSSNLAATGTPGRLTDG 345


>ref|XP_002309277.1| predicted protein [Populus trichocarpa] gi|222855253|gb|EEE92800.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  235 bits (599), Expect = 4e-60
 Identities = 112/168 (66%), Positives = 136/168 (80%)
 Frame = +2

Query: 2   LVVFQLLMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTSFYSSIEGSSWLSSCVRRPKFI 181
           LV FQLLM NVSLLGHLCGILSGFAYTYGLFNFL+PG S +S+IE SSWLSSCVRRPKFI
Sbjct: 182 LVAFQLLMTNVSLLGHLCGILSGFAYTYGLFNFLMPGASSFSAIEASSWLSSCVRRPKFI 241

Query: 182 VCTGGNPSGYIPTHTSQNSTTGGILSGNIWRNLSSLMPQREASAQSVEDSRFPGRGRTLA 361
           +CTGG+P+ YIPTH+ QN+T+ G+LSGNIWRNLSS MPQRE SAQ+ +D RFPG GR L 
Sbjct: 242 LCTGGSPTSYIPTHSGQNTTSSGLLSGNIWRNLSSWMPQRETSAQAGQDYRFPGSGRALG 301

Query: 362 SDQAQMASGLHSDSNLQARLLEDSSPSHPLESAILSTTQRSSEGRHSV 505
           S Q++    ++SDSNLQARLL++S+P+      + +T +   +GR SV
Sbjct: 302 SGQSETVPAVNSDSNLQARLLDNSNPNRSSHLGVTATREPPLDGRRSV 349


Top