BLASTX nr result

ID: Glycyrrhiza24_contig00004422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004422
         (1995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   935   0.0  
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr...   927   0.0  
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   834   0.0  
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              834   0.0  
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   815   0.0  

>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Glycine max]
          Length = 1162

 Score =  935 bits (2417), Expect = 0.0
 Identities = 481/573 (83%), Positives = 511/573 (89%), Gaps = 6/573 (1%)
 Frame = -1

Query: 1995 FAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESGDTKFSSGKTLEEARKLVEQSFGNYV 1816
            FAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNES + K S+GKTLEEARKLVEQSFGNYV
Sbjct: 590  FAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESDNMKPSTGKTLEEARKLVEQSFGNYV 649

Query: 1815 SSNVMXXXXXXXXXXXXXXXXLMSEITDEAIDRKSRKALSQRQYKEIAELQEDLRAEKRV 1636
            SSNVM                LMSEITDEAIDRKSRKALS RQYKEIAEL EDLRAEKRV
Sbjct: 650  SSNVMLAAKEEINKIEKEIEFLMSEITDEAIDRKSRKALSPRQYKEIAELLEDLRAEKRV 709

Query: 1635 RTALRKQMEANRISALKPLLKETEDGHLPFLCLQYRDSEGVLHSIPAVFLGKVDTVNASK 1456
            R+ LRKQ EA RISALKPLL+E E GHLPFLCLQYRDSEGV HSIPAVFLGKVD++NASK
Sbjct: 710  RSELRKQKEAKRISALKPLLEEPESGHLPFLCLQYRDSEGVEHSIPAVFLGKVDSLNASK 769

Query: 1455 LKNVIASVDSFALNSTDAEPST------DDLGPSYNVALGSDNSWYLFTEKWIKTVYETG 1294
            LK++I+SVDSFALN  DAEPS       DDL PSY+VALGSDN+WYLFTEKWIKTVY TG
Sbjct: 770  LKDMISSVDSFALNLADAEPSVADSELKDDLKPSYHVALGSDNTWYLFTEKWIKTVYGTG 829

Query: 1293 FPDVPLVQGDARPREIMSDLLDKEDMKWDKLAHSEHGGLWVMEGSLETWSWSLNVPVLSS 1114
            FP+VPL +GDARPREIMS LLDKEDMKWDKL+HSEHGGLW MEGSL+TWSWSLNVPVLSS
Sbjct: 830  FPNVPLAEGDARPREIMSILLDKEDMKWDKLSHSEHGGLWFMEGSLDTWSWSLNVPVLSS 889

Query: 1113 FSENDELLPKSQAYRDATEKYKEQRNKVARLKKKIPRTEGYKEYSKIIDTVKFIEEKIKR 934
             SENDELL +SQ Y+DA E+YKEQRNKV+RLKKKI R+EGYKEY KIID VKF EEKIKR
Sbjct: 890  LSENDELLLQSQDYKDAIERYKEQRNKVSRLKKKIVRSEGYKEYFKIIDAVKFTEEKIKR 949

Query: 933  LKTRSKRLINRIEQIEPSGWKEFMQVSNVIHETRALDINTHLIFPLGETAAAIRGENELW 754
            LK RSKRLINRIEQIEPSGWKEFMQVSNVIHE RALDINTH+IFPLGETAAAIRGENELW
Sbjct: 950  LKNRSKRLINRIEQIEPSGWKEFMQVSNVIHEIRALDINTHIIFPLGETAAAIRGENELW 1009

Query: 753  LAMVLRSKILLELKPAQLAAVCASLVSEGIKVRPWKNNTYIYEPSATVVNVISLLDEQRS 574
            LAMVLR+KILLELKPAQLAAVCASLVS GIKVRP KNN+YIYEPSATV   I+LLDEQRS
Sbjct: 1010 LAMVLRNKILLELKPAQLAAVCASLVSAGIKVRPGKNNSYIYEPSATVTKFITLLDEQRS 1069

Query: 573  ALLAIQEKHGVTISCCLDTQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLA 394
            ALLA+Q+KH VTISCCLD+QFCGMVEAWASGLTWRE+MMDCAMDDGDLARLLRRTIDLL 
Sbjct: 1070 ALLAMQDKHEVTISCCLDSQFCGMVEAWASGLTWRELMMDCAMDDGDLARLLRRTIDLLV 1129

Query: 393  QIPKLSDIDPLLQRNARAASDVMDRPPISELAG 295
            QIPKL DIDPLL+ NA+AAS VMDRPPISEL G
Sbjct: 1130 QIPKLPDIDPLLKHNAKAASSVMDRPPISELVG 1162


>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
            gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
            DOB1 [Medicago truncatula]
          Length = 1201

 Score =  927 bits (2395), Expect = 0.0
 Identities = 473/568 (83%), Positives = 509/568 (89%), Gaps = 1/568 (0%)
 Frame = -1

Query: 1995 FAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESGDTKFSSGKTLEEARKLVEQSFGNYV 1816
            F+GLEPLVSQFTASYGMVLNLL G KA+ RSN S + K SSGKTL+EARKL+EQSFGNYV
Sbjct: 624  FSGLEPLVSQFTASYGMVLNLLGGGKALRRSNTSDEMKTSSGKTLDEARKLIEQSFGNYV 683

Query: 1815 SSNVMXXXXXXXXXXXXXXXXLMSEITDEAIDRKSRKALSQRQYKEIAELQEDLRAEKRV 1636
            SS+VM                LMSEITDEAIDRKSRKALSQRQYKEIAELQE+LRAEKR+
Sbjct: 684  SSSVMLAAKEELNRIEKEIQLLMSEITDEAIDRKSRKALSQRQYKEIAELQENLRAEKRI 743

Query: 1635 RTALRKQMEANRISALKPLLKETEDGHLPFLCLQYRDSEGVLHSIPAVFLGKVDTVNASK 1456
            R  LR+Q E  RISALKPLL+E+E+  LPFLCLQYRDS+GV HSIPAVFLGKVD++ A K
Sbjct: 744  RAELRRQKETKRISALKPLLEESEN--LPFLCLQYRDSDGVQHSIPAVFLGKVDSLGALK 801

Query: 1455 LKNVIASVDSFALNSTDAEPS-TDDLGPSYNVALGSDNSWYLFTEKWIKTVYETGFPDVP 1279
            LKN+I SVDSFALNS DA+    +D  PSY+VALGSDNSWYLFTEKWIKTVYETGFPDVP
Sbjct: 802  LKNMIGSVDSFALNSADADSELNEDPVPSYHVALGSDNSWYLFTEKWIKTVYETGFPDVP 861

Query: 1278 LVQGDARPREIMSDLLDKEDMKWDKLAHSEHGGLWVMEGSLETWSWSLNVPVLSSFSEND 1099
            LVQGD RPREIMSDLLDKEDMKWD LA+SEHGGLWV EGSLETWSWSLNVP LSSFSEN+
Sbjct: 862  LVQGDTRPREIMSDLLDKEDMKWDNLANSEHGGLWVTEGSLETWSWSLNVPGLSSFSENE 921

Query: 1098 ELLPKSQAYRDATEKYKEQRNKVARLKKKIPRTEGYKEYSKIIDTVKFIEEKIKRLKTRS 919
            E+L KSQAYRDA E+YK+QR+KVARLKKKI RTEG+KEY+KI+D VKFIEEKIKR+KTRS
Sbjct: 922  EVLLKSQAYRDAAEQYKDQRSKVARLKKKISRTEGHKEYNKILDAVKFIEEKIKRMKTRS 981

Query: 918  KRLINRIEQIEPSGWKEFMQVSNVIHETRALDINTHLIFPLGETAAAIRGENELWLAMVL 739
            KRL NRIEQIEPSGWKEFMQVSNVI ETRALDINTH+I+PLGETA+AIRGENELWLAMVL
Sbjct: 982  KRLTNRIEQIEPSGWKEFMQVSNVIRETRALDINTHVIYPLGETASAIRGENELWLAMVL 1041

Query: 738  RSKILLELKPAQLAAVCASLVSEGIKVRPWKNNTYIYEPSATVVNVISLLDEQRSALLAI 559
            RSKIL ELKPAQLAAVCA LVSEGIKVRPWKNN YIYEPSATVVN+I LLDEQR+ALL I
Sbjct: 1042 RSKILAELKPAQLAAVCAGLVSEGIKVRPWKNNNYIYEPSATVVNIIGLLDEQRNALLTI 1101

Query: 558  QEKHGVTISCCLDTQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKL 379
            QEKHGVTISCCLD+QFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIP L
Sbjct: 1102 QEKHGVTISCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPNL 1161

Query: 378  SDIDPLLQRNARAASDVMDRPPISELAG 295
             DIDPLLQ+NARAA DVMDRPPISELAG
Sbjct: 1162 PDIDPLLQKNARAACDVMDRPPISELAG 1189


>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  834 bits (2154), Expect = 0.0
 Identities = 428/574 (74%), Positives = 478/574 (83%), Gaps = 7/574 (1%)
 Frame = -1

Query: 1995 FAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESGDTK-FSSGKTLEEARKLVEQSFGNY 1819
            FAG+EPLVSQFTASYGMVLNLLAG K   R +ES D K   +G+TLEEARKLVEQSFGNY
Sbjct: 601  FAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNY 660

Query: 1818 VSSNVMXXXXXXXXXXXXXXXXLMSEITDEAIDRKSRKALSQRQYKEIAELQEDLRAEKR 1639
            V SNVM                L SE+TD+AIDRKSRK LS+  Y EIA LQE+LRAEKR
Sbjct: 661  VGSNVMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKR 720

Query: 1638 VRTALRKQMEANRISALKPLLKETEDGHLPFLCLQYRDSEGVLHSIPAVFLGKVDTVNAS 1459
            +RT LR++ME  R+SALK LLKE+E+GHLPF+CLQY+DSE V H +PAV+LGKVD+ + S
Sbjct: 721  LRTELRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGS 780

Query: 1458 KLKNVIASVDSFALNSTDAEPSTDDLG------PSYNVALGSDNSWYLFTEKWIKTVYET 1297
            K+KN++ + D FALN+   E + DD        PSY VALGSDNSWYLFTEKWIKTVY T
Sbjct: 781  KVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKTVYRT 840

Query: 1296 GFPDVPLVQGDARPREIMSDLLDKEDMKWDKLAHSEHGGLWVMEGSLETWSWSLNVPVLS 1117
            GFP+V L QGDA PREIM  LLDK D++W++LA SE GGLW +EGSLETWSWSLNVPVLS
Sbjct: 841  GFPNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLS 900

Query: 1116 SFSENDELLPKSQAYRDATEKYKEQRNKVARLKKKIPRTEGYKEYSKIIDTVKFIEEKIK 937
            S SE+DE+L  SQAY +A E YKEQRNKV+RLKKKI RTEG+KEY KIID  KF EEKIK
Sbjct: 901  SLSEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMSKFTEEKIK 960

Query: 936  RLKTRSKRLINRIEQIEPSGWKEFMQVSNVIHETRALDINTHLIFPLGETAAAIRGENEL 757
            RLK RS RL +RIEQIEPSGWKEF+QVSNVIHETRALDINTH+IFPLGETAAAIRGENEL
Sbjct: 961  RLKARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGENEL 1020

Query: 756  WLAMVLRSKILLELKPAQLAAVCASLVSEGIKVRPWKNNTYIYEPSATVVNVISLLDEQR 577
            WLAMVLRSK+LL LKPAQLAAVC SLVSEGIKVRPWKNN+YIYE S TV+NVISLLDEQR
Sbjct: 1021 WLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLDEQR 1080

Query: 576  SALLAIQEKHGVTISCCLDTQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLL 397
            ++LL +QEKH V I CCLD+QF GMVEAWASGLTWREIMMDCAMD+GDLARLLRRTID+L
Sbjct: 1081 NSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDIL 1140

Query: 396  AQIPKLSDIDPLLQRNARAASDVMDRPPISELAG 295
            AQIPKL DIDPLLQ NA  AS+VMDRPPISELAG
Sbjct: 1141 AQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1174


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  834 bits (2154), Expect = 0.0
 Identities = 428/574 (74%), Positives = 478/574 (83%), Gaps = 7/574 (1%)
 Frame = -1

Query: 1995 FAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESGDTK-FSSGKTLEEARKLVEQSFGNY 1819
            FAG+EPLVSQFTASYGMVLNLLAG K   R +ES D K   +G+TLEEARKLVEQSFGNY
Sbjct: 491  FAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNY 550

Query: 1818 VSSNVMXXXXXXXXXXXXXXXXLMSEITDEAIDRKSRKALSQRQYKEIAELQEDLRAEKR 1639
            V SNVM                L SE+TD+AIDRKSRK LS+  Y EIA LQE+LRAEKR
Sbjct: 551  VGSNVMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKR 610

Query: 1638 VRTALRKQMEANRISALKPLLKETEDGHLPFLCLQYRDSEGVLHSIPAVFLGKVDTVNAS 1459
            +RT LR++ME  R+SALK LLKE+E+GHLPF+CLQY+DSE V H +PAV+LGKVD+ + S
Sbjct: 611  LRTELRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGS 670

Query: 1458 KLKNVIASVDSFALNSTDAEPSTDDLG------PSYNVALGSDNSWYLFTEKWIKTVYET 1297
            K+KN++ + D FALN+   E + DD        PSY VALGSDNSWYLFTEKWIKTVY T
Sbjct: 671  KVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKTVYRT 730

Query: 1296 GFPDVPLVQGDARPREIMSDLLDKEDMKWDKLAHSEHGGLWVMEGSLETWSWSLNVPVLS 1117
            GFP+V L QGDA PREIM  LLDK D++W++LA SE GGLW +EGSLETWSWSLNVPVLS
Sbjct: 731  GFPNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLS 790

Query: 1116 SFSENDELLPKSQAYRDATEKYKEQRNKVARLKKKIPRTEGYKEYSKIIDTVKFIEEKIK 937
            S SE+DE+L  SQAY +A E YKEQRNKV+RLKKKI RTEG+KEY KIID  KF EEKIK
Sbjct: 791  SLSEDDEVLKMSQAYYEAVECYKEQRNKVSRLKKKIARTEGFKEYKKIIDMSKFTEEKIK 850

Query: 936  RLKTRSKRLINRIEQIEPSGWKEFMQVSNVIHETRALDINTHLIFPLGETAAAIRGENEL 757
            RLK RS RL +RIEQIEPSGWKEF+QVSNVIHETRALDINTH+IFPLGETAAAIRGENEL
Sbjct: 851  RLKARSNRLSSRIEQIEPSGWKEFLQVSNVIHETRALDINTHIIFPLGETAAAIRGENEL 910

Query: 756  WLAMVLRSKILLELKPAQLAAVCASLVSEGIKVRPWKNNTYIYEPSATVVNVISLLDEQR 577
            WLAMVLRSK+LL LKPAQLAAVC SLVSEGIKVRPWKNN+YIYE S TV+NVISLLDEQR
Sbjct: 911  WLAMVLRSKVLLGLKPAQLAAVCGSLVSEGIKVRPWKNNSYIYEASTTVINVISLLDEQR 970

Query: 576  SALLAIQEKHGVTISCCLDTQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLL 397
            ++LL +QEKH V I CCLD+QF GMVEAWASGLTWREIMMDCAMD+GDLARLLRRTID+L
Sbjct: 971  NSLLQLQEKHDVQIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDIL 1030

Query: 396  AQIPKLSDIDPLLQRNARAASDVMDRPPISELAG 295
            AQIPKL DIDPLLQ NA  AS+VMDRPPISELAG
Sbjct: 1031 AQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1064


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  815 bits (2106), Expect = 0.0
 Identities = 410/573 (71%), Positives = 476/573 (83%), Gaps = 6/573 (1%)
 Frame = -1

Query: 1995 FAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESGDTKFS-SGKTLEEARKLVEQSFGNY 1819
            F+GL+PLVSQFTASYGMVLNLLAG K   RS+E  + K S +G+TLEEARKL+EQSFGNY
Sbjct: 587  FSGLQPLVSQFTASYGMVLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQSFGNY 646

Query: 1818 VSSNVMXXXXXXXXXXXXXXXXLMSEITDEAIDRKSRKALSQRQYKEIAELQEDLRAEKR 1639
            V SNVM                L SEI++EAIDRKS+K L+Q  Y+EIAELQE+LRAEKR
Sbjct: 647  VGSNVMLAAKEELARIEKEIETLTSEISEEAIDRKSQKLLAQTAYQEIAELQEELRAEKR 706

Query: 1638 VRTALRKQMEANRISALKPLLKETEDGHLPFLCLQYRDSEGVLHSIPAVFLGKVDTVNAS 1459
            +RT LR++ME  R+ +LKPLLKE EDGHLPF+ L Y DS+GV H + AV+LGKVDT+N  
Sbjct: 707  LRTELRRKMELERVFSLKPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVDTLNIE 766

Query: 1458 KLKNVIASVDSFALNSTDAEPSTDDLG-----PSYNVALGSDNSWYLFTEKWIKTVYETG 1294
            KLK+++   D+FAL +        D+G     PSY+VALGSDNSWYLFTEKWI+ VY TG
Sbjct: 767  KLKSMVRDYDAFALKTVVENFEVGDIGGEDVKPSYHVALGSDNSWYLFTEKWIRMVYRTG 826

Query: 1293 FPDVPLVQGDARPREIMSDLLDKEDMKWDKLAHSEHGGLWVMEGSLETWSWSLNVPVLSS 1114
            FP+V L  GDA PREIM++LLDK +M+W KLA SE GGLW +EGSLETWSWSLNVPVLSS
Sbjct: 827  FPNVALALGDALPREIMTELLDKAEMQWQKLAVSELGGLWCLEGSLETWSWSLNVPVLSS 886

Query: 1113 FSENDELLPKSQAYRDATEKYKEQRNKVARLKKKIPRTEGYKEYSKIIDTVKFIEEKIKR 934
             SE DE+L  SQAY DA E YK QRNKV+RLKK+I RTEG+KEY KIID+ KF +EKI+R
Sbjct: 887  LSEEDEVLQLSQAYNDAVECYKNQRNKVSRLKKRIARTEGFKEYKKIIDSAKFTQEKIRR 946

Query: 933  LKTRSKRLINRIEQIEPSGWKEFMQVSNVIHETRALDINTHLIFPLGETAAAIRGENELW 754
            LK RSKRLI RIEQIEP+GWKEF+QVSNVIHE+RALDINTH+IFPLGETAAAIRGENELW
Sbjct: 947  LKVRSKRLIGRIEQIEPTGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGENELW 1006

Query: 753  LAMVLRSKILLELKPAQLAAVCASLVSEGIKVRPWKNNTYIYEPSATVVNVISLLDEQRS 574
            LAMVLR+K+LL+LKPAQLAAVC SLVSEGI++RPWKNN+++YEPS TV+NVI LL+E +S
Sbjct: 1007 LAMVLRNKLLLDLKPAQLAAVCGSLVSEGIRLRPWKNNSFVYEPSTTVLNVIDLLEETKS 1066

Query: 573  ALLAIQEKHGVTISCCLDTQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLA 394
            ++L +QEKHGV I CCLD+QF GMVEAWASGLTW+EIMMDCAMD+GDLARLLRRTIDLLA
Sbjct: 1067 SILELQEKHGVQIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRTIDLLA 1126

Query: 393  QIPKLSDIDPLLQRNARAASDVMDRPPISELAG 295
            QIPKL DIDPLLQ NA+ AS VMDRPPISELAG
Sbjct: 1127 QIPKLPDIDPLLQSNAKGASSVMDRPPISELAG 1159


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