BLASTX nr result

ID: Glycyrrhiza24_contig00004420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004420
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycin...   308   1e-81
ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus ...   261   2e-67
ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-lik...   233   5e-59
ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61...   231   1e-58
ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|2...   221   1e-55

>ref|XP_003529811.1| PREDICTED: F-box only protein 6-like [Glycine max]
          Length = 369

 Score =  308 bits (789), Expect = 1e-81
 Identities = 158/284 (55%), Positives = 178/284 (62%), Gaps = 1/284 (0%)
 Frame = +3

Query: 54  LSMWSNIPFDVLASIFSFLSPDSLARARSTCKNWHTCSKPYPFXXXXXXXWFLALPIRNH 233
           +S+WSN+PFD+LA+IFSFLSPDSLARARS CKNWHTCSK Y         WFLALPIRNH
Sbjct: 1   MSIWSNLPFDILANIFSFLSPDSLARARSVCKNWHTCSKAYRIATTTTTSWFLALPIRNH 60

Query: 234 HHHHKKPCCYAHNPITSNWHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
             H     CYAHNP+   WH+                                       
Sbjct: 61  GPH-----CYAHNPVIDKWHQLSLPIPSIRPIAPIGSLLLSRVTNSTTLQLGL------- 108

Query: 414 XXCNPFTRQFKHLPRLHVPRTXXXXXXXXXXXXXXXXXXXX-PRFRIYVAGGMSEAARGG 590
             CNPFTR+F+HLPRLHV RT                     P FR+YVAGGMSEAA+GG
Sbjct: 109 --CNPFTREFRHLPRLHVARTNPAVGVVTISESSNPNHNVRFPSFRVYVAGGMSEAAQGG 166

Query: 591 GATYEPTIEMYDSMVDMWNVVGSMPVEFAIRLTVWTPNESVSIXXXXXXXLYWITSARAY 770
           GATYE  +EMYDS  D W +VGS PVEFA+RLTVWTPNE+V I       LYW+TSARAY
Sbjct: 167 GATYETKVEMYDSRFDTWRIVGSTPVEFAVRLTVWTPNENVCI----GETLYWVTSARAY 222

Query: 771 SVMGFEVGTSTWREVGVPCAEMIEFATLVKRNGALALVGGTCGG 902
           SVMGF+VG +TW E+GVP AE +EFATLV RNGAL LVGGTCGG
Sbjct: 223 SVMGFDVGRNTWSELGVPMAEKLEFATLVPRNGALGLVGGTCGG 266


>ref|XP_002517599.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543231|gb|EEF44763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 367

 Score =  261 bits (666), Expect = 2e-67
 Identities = 139/286 (48%), Positives = 169/286 (59%), Gaps = 5/286 (1%)
 Frame = +3

Query: 60  MWSNIPFDVLASIFSFLSPDSLARARSTCKNWHTCSKPYPFXXXXXXX-----WFLALPI 224
           MWS++PFD+LA+IFSFLSPDSLARARS C++WHTC   YP             WF+ALP 
Sbjct: 1   MWSSLPFDLLANIFSFLSPDSLARARSACRHWHTCVDAYPLSLAPSMLHHHPPWFVALPT 60

Query: 225 RNHHHHHKKPCCYAHNPITSNWHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 404
           RN     ++PCCY HNP+T  WH                                     
Sbjct: 61  RN-----REPCCYVHNPVTKRWH-------MLSLEFLSDPFRPITCISGLILLKATKSTI 108

Query: 405 XXXXXCNPFTRQFKHLPRLHVPRTXXXXXXXXXXXXXXXXXXXXPRFRIYVAGGMSEAAR 584
                CNPFTRQF+HLP L++ RT                      FR+YVAGGMSEA+R
Sbjct: 109 LSLAMCNPFTRQFRHLPLLNIARTNPAVGVVILNSSQ--------HFRVYVAGGMSEASR 160

Query: 585 GGGATYEPTIEMYDSMVDMWNVVGSMPVEFAIRLTVWTPNESVSIXXXXXXXLYWITSAR 764
           GG ATYEPT+EMYDS  + W + GSMPVEFA+RLTVW+PNESV         LYWITSAR
Sbjct: 161 GG-ATYEPTLEMYDSRHNTWKIAGSMPVEFAVRLTVWSPNESV----YSNGILYWITSAR 215

Query: 765 AYSVMGFEVGTSTWREVGVPCAEMIEFATLVKRNGALALVGGTCGG 902
           A+S+M FE+ ++ W+EV VP A+ +EFATLV+R+G L LVG T GG
Sbjct: 216 AFSMMAFEIESNKWQEVSVPMADRLEFATLVQRSGRLTLVGSTGGG 261


>ref|XP_004152210.1| PREDICTED: protein UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
           gi|449484183|ref|XP_004156809.1| PREDICTED: protein
           UNUSUAL FLORAL ORGANS-like [Cucumis sativus]
          Length = 372

 Score =  233 bits (594), Expect = 5e-59
 Identities = 129/285 (45%), Positives = 157/285 (55%), Gaps = 5/285 (1%)
 Frame = +3

Query: 60  MWSNIPFDVLASIFSFLSPDSLARARSTCKNWHTCS-----KPYPFXXXXXXXWFLALPI 224
           MWS++PFD+LA+IFSFLSPDSLARARS CK WH C         P        WF+ALP+
Sbjct: 1   MWSSLPFDLLANIFSFLSPDSLARARSACKQWHECIDTCPLNTEPILSQSHPSWFIALPL 60

Query: 225 RNHHHHHKKPCCYAHNPITSNWHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 404
           R H        C+AHNPI  NWH+                                    
Sbjct: 61  RAHK------LCFAHNPILDNWHKLSLEFLPDLVKPIATVGSLLFLRSTSSVVLQLIL-- 112

Query: 405 XXXXXCNPFTRQFKHLPRLHVPRTXXXXXXXXXXXXXXXXXXXXPRFRIYVAGGMSEAAR 584
                CNPFT QF++LPR ++ RT                    P F++YVAGGMS A +
Sbjct: 113 -----CNPFTTQFRYLPRPNISRTNPAVGVVIQNTRQDSQI---PDFKVYVAGGMSVAPQ 164

Query: 585 GGGATYEPTIEMYDSMVDMWNVVGSMPVEFAIRLTVWTPNESVSIXXXXXXXLYWITSAR 764
           GG  TYE  +EMYDS  D W +VGS+PVEFA+RLTVWT NESV         LYWITSAR
Sbjct: 165 GG-TTYESKLEMYDSRNDSWEIVGSLPVEFAVRLTVWTHNESV----YSNGILYWITSAR 219

Query: 765 AYSVMGFEVGTSTWREVGVPCAEMIEFATLVKRNGALALVGGTCG 899
           A+SVMGF++ ++  RE+ VP A+ +EFA L  RNG L +VGG CG
Sbjct: 220 AFSVMGFDIDSNNCRELQVPMADRLEFAALTSRNGRLTIVGGVCG 264


>ref|XP_003632755.1| PREDICTED: F-box/kelch-repeat protein At3g61590-like [Vitis
           vinifera]
          Length = 369

 Score =  231 bits (590), Expect = 1e-58
 Identities = 128/281 (45%), Positives = 155/281 (55%), Gaps = 2/281 (0%)
 Frame = +3

Query: 60  MWSNIPFDVLASIFSFLSPDSLARARSTCKNWHTCSKPYPFXXXXXXX--WFLALPIRNH 233
           MWSN+PFD+LA+IFSFL  DSLA A S CK+WHTC   YP          WF+ALP+RN 
Sbjct: 1   MWSNLPFDLLANIFSFLPADSLALASSVCKHWHTCVTAYPATAAGARNPPWFVALPVRNR 60

Query: 234 HHHHKKPCCYAHNPITSNWHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
            H      CY HNPI   WH                                        
Sbjct: 61  GH-----TCYTHNPIIDTWH-------GLFLGFLPHAIRPVASIGGLVLLRSTTSTTLQL 108

Query: 414 XXCNPFTRQFKHLPRLHVPRTXXXXXXXXXXXXXXXXXXXXPRFRIYVAGGMSEAARGGG 593
             CN FT+++  LP L++ RT                      FR+YVAGGMSEA   GG
Sbjct: 109 AICNLFTKRYWSLPMLNIARTNPAVGVVFGLDESPDVRFSS--FRVYVAGGMSEAP-SGG 165

Query: 594 ATYEPTIEMYDSMVDMWNVVGSMPVEFAIRLTVWTPNESVSIXXXXXXXLYWITSARAYS 773
           A YEPT+EMYDS  D W+++G MPVEFA+RLTVW+PNESV         LYW+TSARAYS
Sbjct: 166 AAYEPTLEMYDSWQDRWDIMGRMPVEFAVRLTVWSPNESV----YSGGVLYWMTSARAYS 221

Query: 774 VMGFEVGTSTWREVGVPCAEMIEFATLVKRNGALALVGGTC 896
           VMG ++ +++WRE+ VP AE +EFA LV+ NG   LVGGTC
Sbjct: 222 VMGLDIESNSWRELSVPMAERLEFAALVRWNGRPTLVGGTC 262


>ref|XP_002304150.1| predicted protein [Populus trichocarpa] gi|222841582|gb|EEE79129.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  221 bits (564), Expect = 1e-55
 Identities = 124/286 (43%), Positives = 155/286 (54%), Gaps = 5/286 (1%)
 Frame = +3

Query: 60  MWSNIPFDVLASIFSFLSPDSLARARSTCKNWHTCSKPYPFXXXXXXX-----WFLALPI 224
           MW+ +P ++LA+IFSFLSPDSLARA++ C+ W TC+  YP             WF+ALP 
Sbjct: 1   MWNRLPSELLANIFSFLSPDSLARAKTACRYWRTCANSYPLSTAASMVRHHQAWFVALPT 60

Query: 225 RNHHHHHKKPCCYAHNPITSNWHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 404
           R+     +  CCY HNP    WH                                     
Sbjct: 61  RS-----RGLCCYLHNPNIDKWH-------VLSLDFQPHPTRPIASIGSLILSRPTDSTT 108

Query: 405 XXXXXCNPFTRQFKHLPRLHVPRTXXXXXXXXXXXXXXXXXXXXPRFRIYVAGGMSEAAR 584
                 NPFT++F+  P L + RT                      FR+YVAGGMSEA R
Sbjct: 109 LQLAISNPFTKEFRCFPMLKIARTNPAVGVVILGPAQHGPSL---HFRVYVAGGMSEAPR 165

Query: 585 GGGATYEPTIEMYDSMVDMWNVVGSMPVEFAIRLTVWTPNESVSIXXXXXXXLYWITSAR 764
           G  ATYEPT+E+YDS  D W +VGS+PVEFA+RLTVWTPNESV         LYW+TSAR
Sbjct: 166 GA-ATYEPTMEVYDSEDDAWRIVGSVPVEFAVRLTVWTPNESV----YSKGVLYWMTSAR 220

Query: 765 AYSVMGFEVGTSTWREVGVPCAEMIEFATLVKRNGALALVGGTCGG 902
           AYS+MGFE  ++ W+E+ V  A+ +EFATL + NG L LVGGT GG
Sbjct: 221 AYSIMGFEFRSNKWQELSVHMADKLEFATLAQLNGRLTLVGGTSGG 266


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