BLASTX nr result

ID: Glycyrrhiza24_contig00004400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004400
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593114.1| Auxin-induced protein 5NG4 [Medicago truncat...    65   1e-20
ref|XP_003531568.1| PREDICTED: auxin-induced protein 5NG4-like [...    61   5e-17
ref|XP_003547067.1| PREDICTED: auxin-induced protein 5NG4-like [...    61   5e-17
ref|XP_003533139.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induce...    58   1e-13
ref|XP_003593115.1| Auxin-induced protein 5NG4 [Medicago truncat...    51   6e-13

>ref|XP_003593114.1| Auxin-induced protein 5NG4 [Medicago truncatula]
           gi|355482162|gb|AES63365.1| Auxin-induced protein 5NG4
           [Medicago truncatula]
          Length = 394

 Score = 65.5 bits (158), Expect(3) = 1e-20
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 6/46 (13%)
 Frame = +1

Query: 73  FLVCVEM------LGWNIKLLAVAYSGIVTSGLVIIVVSWCIKMRG 192
           F +CVE       LGWNI+LLAVAYSG+V SGLV+IV SWCIKMRG
Sbjct: 241 FGLCVERDWSQWKLGWNIRLLAVAYSGVVASGLVVIVTSWCIKMRG 286



 Score = 56.2 bits (134), Expect(3) = 1e-20
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +3

Query: 3   SKEYPSHYSSTALMSTMGAVQAAVFGLC 86
           SKEYPSHYSSTALMSTMGA+QA  FGLC
Sbjct: 217 SKEYPSHYSSTALMSTMGAIQATAFGLC 244



 Score = 22.7 bits (47), Expect(3) = 1e-20
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 257 WCIKMRGENLALIS*CLLIM 316
           WCIKMRG   A +   L+++
Sbjct: 280 WCIKMRGPLFASVFNPLMLL 299


>ref|XP_003531568.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 405

 Score = 60.8 bits (146), Expect(3) = 5e-17
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +1

Query: 94  LGWNIKLLAVAYSGIVTSGLVIIVVSWCIKMRG 192
           LGWNI+LLAVAYSGIV SG+V+I+ +WCI+MRG
Sbjct: 257 LGWNIRLLAVAYSGIVASGIVVIITAWCIQMRG 289



 Score = 50.4 bits (119), Expect(3) = 5e-17
 Identities = 22/28 (78%), Positives = 23/28 (82%)
 Frame = +3

Query: 3   SKEYPSHYSSTALMSTMGAVQAAVFGLC 86
           SKEYP HYSSTALMST GA+QA  FG C
Sbjct: 220 SKEYPCHYSSTALMSTAGAIQATAFGFC 247



 Score = 20.8 bits (42), Expect(3) = 5e-17
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 257 WCIKMRGENLALI 295
           WCI+MRG   A +
Sbjct: 283 WCIQMRGPLFASV 295


>ref|XP_003547067.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 401

 Score = 60.8 bits (146), Expect(3) = 5e-17
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = +1

Query: 94  LGWNIKLLAVAYSGIVTSGLVIIVVSWCIKMRG 192
           LGWNI+LLAVAYSGIV SG+V+I+ +WCI+MRG
Sbjct: 254 LGWNIRLLAVAYSGIVASGIVVIITAWCIQMRG 286



 Score = 50.4 bits (119), Expect(3) = 5e-17
 Identities = 22/28 (78%), Positives = 23/28 (82%)
 Frame = +3

Query: 3   SKEYPSHYSSTALMSTMGAVQAAVFGLC 86
           SKEYP HYSSTALMST GA+QA  FG C
Sbjct: 217 SKEYPCHYSSTALMSTAGAIQATAFGFC 244



 Score = 20.8 bits (42), Expect(3) = 5e-17
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 257 WCIKMRGENLALI 295
           WCI+MRG   A +
Sbjct: 280 WCIQMRGPLFASV 292


>ref|XP_003533139.1| PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein 5NG4-like,
           partial [Glycine max]
          Length = 168

 Score = 57.8 bits (138), Expect(3) = 1e-13
 Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 6/47 (12%)
 Frame = +1

Query: 70  LFLVCVEM------LGWNIKLLAVAYSGIVTSGLVIIVVSWCIKMRG 192
           +F +C+E       LGWNI+LL  A+SGIV SGLV+IV +WC+++RG
Sbjct: 30  IFALCIEKDWSQWKLGWNIRLLTSAFSGIVVSGLVLIVTAWCVRLRG 76



 Score = 41.2 bits (95), Expect(3) = 1e-13
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +3

Query: 3  SKEYPSHYSSTALMSTMGAVQAAVFGLC 86
          SKEYP  +S T LM++MGA+QA +F LC
Sbjct: 7  SKEYPRPHSCTTLMTSMGAIQATIFALC 34



 Score = 21.6 bits (44), Expect(3) = 1e-13
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 257 WCIKMRGENLALI 295
           WC+++RG   AL+
Sbjct: 70  WCVRLRGPLYALV 82


>ref|XP_003593115.1| Auxin-induced protein 5NG4 [Medicago truncatula]
           gi|355482163|gb|AES63366.1| Auxin-induced protein 5NG4
           [Medicago truncatula]
          Length = 395

 Score = 51.2 bits (121), Expect(2) = 6e-13
 Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 6/47 (12%)
 Frame = +1

Query: 70  LFLVCVEM------LGWNIKLLAVAYSGIVTSGLVIIVVSWCIKMRG 192
           LF +CVE       LG +I+LL  AYSGIV SG+++IV++WC+ +RG
Sbjct: 234 LFALCVEKDLSQWRLGLSIRLLTSAYSGIVASGIMVIVIAWCVGIRG 280



 Score = 47.4 bits (111), Expect(2) = 6e-13
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 3   SKEYPSHYSSTALMSTMGAVQAAVFGLC 86
           SKEY  HYSSTALMS MGA+QA +F LC
Sbjct: 211 SKEYQGHYSSTALMSLMGAIQATLFALC 238


Top