BLASTX nr result
ID: Glycyrrhiza24_contig00004391
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00004391
(1996 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr... 769 0.0
ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 728 0.0
ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik... 724 0.0
ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi... 523 e-146
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera] 523 e-146
>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
SMARCC2 [Medicago truncatula]
Length = 540
Score = 769 bits (1986), Expect = 0.0
Identities = 402/554 (72%), Positives = 439/554 (79%), Gaps = 3/554 (0%)
Frame = +1
Query: 100 MEASKDPNSNPGRIDESDSELELYTIPGSSRWFVWDEIHETEKTAFKEFFDGSSISRTPK 279
ME SKDP S DSELELYTIP SS+WF WDEIHETEKTAFKE+FDG+SI+RTPK
Sbjct: 1 MEGSKDPIS--------DSELELYTIPSSSKWFAWDEIHETEKTAFKEYFDGTSITRTPK 52
Query: 280 IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTLLRKVFLFLESWGLINYGATSGDDG 459
IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVT L KVFLFLE WGLINYGA S +
Sbjct: 53 IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLNKVFLFLECWGLINYGAPSAGND 112
Query: 460 GDAEREHEEERCKVRVEDGAPNGIRVVATPNSLKQLSLPRNTK--AGGYNXXXXXXXXXX 633
G+AE+EHE+ERCK++VE+GAPNGIRVVATPNSLK +SLPR+TK AGG +
Sbjct: 113 GEAEKEHEKERCKLKVEEGAPNGIRVVATPNSLKPISLPRDTKIAAGGGDESGAGVKIAP 172
Query: 634 XXXYSDVYGDLMSQKEELNCGLCGDKCGSGRYRSTQDDFIICTKCFKNGNYGEKRSMENF 813
YSDVYGDL+ +KE +NCG CGDKCGSG YRST+D+FIICTKCFKNGNYGEKRSME+F
Sbjct: 173 LASYSDVYGDLIRRKE-VNCGNCGDKCGSGHYRSTKDNFIICTKCFKNGNYGEKRSMEDF 231
Query: 814 ILDESSEFSGKHSAVWTEGETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFG 993
L+ESSE S HSAVWTEGETLLLLESVLKHGDDWELVAQSV+TKTKL+CISKLIELPFG
Sbjct: 232 KLNESSEISANHSAVWTEGETLLLLESVLKHGDDWELVAQSVRTKTKLECISKLIELPFG 291
Query: 994 ELMLGSAHRNGNSNSANGVMNNVKQVQSSSSDHQETSKTQDQSPELKNENEQNGDVVKES 1173
ELML S RN NSNS G++NN QVQ SSSDHQETS TQDQS E KNE EQNGD V E+
Sbjct: 292 ELMLASVRRNDNSNSVTGIVNNRNQVQVSSSDHQETSMTQDQSSEPKNEVEQNGDAVNEN 351
Query: 1174 PSKRQRVAALSDSSSSLMEQVGLLSSVVDPHXXXXXXXXXXXXLCDENMCPREIFDVEED 1353
PSKR+RV+ LSDSSSSLM+QVGLLS+VVDPH LCDEN PR+IFDVEED
Sbjct: 352 PSKRRRVSTLSDSSSSLMKQVGLLSTVVDPHVTAAAASAAITALCDENSLPRDIFDVEED 411
Query: 1354 YASARALEGEGLEM-EGSTQSEIDVRCPKDDIPXXXXXXXXXXXXXXXXXXXXXXXXDQE 1530
ASARALE EGLEM EGSTQSE+ KDDIP DQE
Sbjct: 412 NASARALEAEGLEMVEGSTQSEV-----KDDIPLTLRIRAAIGTALGATAARAKLLADQE 466
Query: 1531 DREIEQLVATIIEAQIEKLQHKAKHFDELELLMEKEHAGMEEVKDSILTERIDVLRRTFR 1710
DREIE LVATIIEAQ+EKLQ K KHFDELELLMEKEHA MEE+KDSILTERIDVLR+TF+
Sbjct: 467 DREIEHLVATIIEAQVEKLQQKVKHFDELELLMEKEHAEMEELKDSILTERIDVLRKTFK 526
Query: 1711 SGITRWKDYSYAKS 1752
SG+ RWK Y KS
Sbjct: 527 SGVARWKHYPSLKS 540
>ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
Length = 527
Score = 728 bits (1878), Expect = 0.0
Identities = 386/552 (69%), Positives = 418/552 (75%), Gaps = 1/552 (0%)
Frame = +1
Query: 100 MEASKDPNSNPGRIDESDSELELYTIPGSSRWFVWDEIHETEKTAFKEFFDGSSISRTPK 279
ME +KDPNS +SDSELELYTIP SSRWF W+EIHETE+ AFKE+FDGSSISR+PK
Sbjct: 1 MEVAKDPNSQA----DSDSELELYTIPSSSRWFAWEEIHETERAAFKEYFDGSSISRSPK 56
Query: 280 IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTLLRKVFLFLESWGLINYGATSGDDG 459
IYKEYRDFIINKYREEPSRRLTF+EVRKSLVGDVT L KVFLFLE W LINYG
Sbjct: 57 IYKEYRDFIINKYREEPSRRLTFSEVRKSLVGDVTFLHKVFLFLEHWALINYGTAE---- 112
Query: 460 GDAEREHEEERCKVRVEDGAPNGIRVVATPNSLKQLSLPRNTKAGGYNXXXXXXXXXXXX 639
+ EE+ CKVR E+GAP+GIRV ATPNSLK + LPRN K+ N
Sbjct: 113 -----DVEEDHCKVRFEEGAPSGIRVAATPNSLKPMLLPRNGKSAA-NATGASLKLPPLA 166
Query: 640 XYSDVYGDLMSQKEELNCGLCGDKCGSGRYRSTQDDFIICTKCFKNGNYGEKRSMENFIL 819
YSDVYGDL+ QKE NC LC +CGSG YR TQD+FIIC CFK+GNYGEKRS E+F+
Sbjct: 167 SYSDVYGDLIRQKEG-NCALCAHQCGSGHYRCTQDNFIICANCFKSGNYGEKRSAEDFVF 225
Query: 820 DESSEFSGKHSAVWTEGETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL 999
ESSE S KH VWTE ETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL
Sbjct: 226 SESSENSVKHDTVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL 285
Query: 1000 MLGSAHRNGNSNSANGVMNNVKQVQSSSSDHQETSKTQDQSPELKNENEQNGDVVKESPS 1179
MLG H+N N N ANG+MNN KQVQSSSSD+QE SKT+DQ+PEL NENEQNGD VKESPS
Sbjct: 286 MLGPTHKNVNINGANGIMNNAKQVQSSSSDNQEISKTKDQTPELTNENEQNGDAVKESPS 345
Query: 1180 KRQRVAALSDSSSSLMEQVGLLSSVVDPHXXXXXXXXXXXXLCDENMCPREIFDVEEDYA 1359
KRQRVAALSDSSS LM QVGL+S+VVDPH LCDE++CPREIFDVEEDY
Sbjct: 346 KRQRVAALSDSSSLLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIFDVEEDY- 404
Query: 1360 SARALEG-EGLEMEGSTQSEIDVRCPKDDIPXXXXXXXXXXXXXXXXXXXXXXXXDQEDR 1536
SARALEG EGLEME S+ SE IP DQEDR
Sbjct: 405 SARALEGEEGLEMERSSLSE---------IPLTLRVRAATATALGAAAARAKLLADQEDR 455
Query: 1537 EIEQLVATIIEAQIEKLQHKAKHFDELELLMEKEHAGMEEVKDSILTERIDVLRRTFRSG 1716
EIE LVATIIEAQIEK+ K KHFD LELLMEKEHA ME +KDSILTERIDVLRRTFRSG
Sbjct: 456 EIEHLVATIIEAQIEKMLRKVKHFDNLELLMEKEHAEMENLKDSILTERIDVLRRTFRSG 515
Query: 1717 ITRWKDYSYAKS 1752
+TRWKDYSYAKS
Sbjct: 516 VTRWKDYSYAKS 527
>ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
Length = 522
Score = 724 bits (1869), Expect = 0.0
Identities = 382/551 (69%), Positives = 413/551 (74%)
Frame = +1
Query: 100 MEASKDPNSNPGRIDESDSELELYTIPGSSRWFVWDEIHETEKTAFKEFFDGSSISRTPK 279
ME +KDPNS D ELELYTIP SSRWF W+EIHETE+TAFKE+FDG+SI+RTPK
Sbjct: 1 MEVTKDPNS--------DFELELYTIPSSSRWFAWEEIHETERTAFKEYFDGNSITRTPK 52
Query: 280 IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTLLRKVFLFLESWGLINYGATSGDDG 459
IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVT L K FL LE WGLINYG G
Sbjct: 53 IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLHKAFLLLEHWGLINYGTAQPSSG 112
Query: 460 GDAEREHEEERCKVRVEDGAPNGIRVVATPNSLKQLSLPRNTKAGGYNXXXXXXXXXXXX 639
DA E EE R KVR+E+GAP GIRV ATPNSLK + LPRN K+G N
Sbjct: 113 ADAAEEEEEHR-KVRLEEGAPGGIRVAATPNSLKPMLLPRNGKSG-VNASGASLKLPPLA 170
Query: 640 XYSDVYGDLMSQKEELNCGLCGDKCGSGRYRSTQDDFIICTKCFKNGNYGEKRSMENFIL 819
YSDVYGDL+ QKE NCGLCG KCGSG YR TQD+FIIC CFK+GNYGEKRS E+F+L
Sbjct: 171 SYSDVYGDLIRQKEG-NCGLCGHKCGSGHYRCTQDNFIICINCFKSGNYGEKRSTEDFVL 229
Query: 820 DESSEFSGKHSAVWTEGETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL 999
ESSE SGKH VWTE ETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL
Sbjct: 230 SESSENSGKHDTVWTEAETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL 289
Query: 1000 MLGSAHRNGNSNSANGVMNNVKQVQSSSSDHQETSKTQDQSPELKNENEQNGDVVKESPS 1179
MLG AHRN N N ANG++NN KQVQSSSSD+QE SKT+DQSPE NENEQNGD VKESPS
Sbjct: 290 MLGPAHRNVNINDANGIVNNAKQVQSSSSDNQEISKTKDQSPEFTNENEQNGDAVKESPS 349
Query: 1180 KRQRVAALSDSSSSLMEQVGLLSSVVDPHXXXXXXXXXXXXLCDENMCPREIFDVEEDYA 1359
KRQRVA+LSDSSSSLM QVGL+S+VVDPH LCDE++CPREIFDV+ +
Sbjct: 350 KRQRVASLSDSSSSLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIFDVDGE-- 407
Query: 1360 SARALEGEGLEMEGSTQSEIDVRCPKDDIPXXXXXXXXXXXXXXXXXXXXXXXXDQEDRE 1539
EGLEME S+ SE IP DQEDRE
Sbjct: 408 -------EGLEMERSSLSE---------IPLTLRVRAATATALGAAAARAKLLADQEDRE 451
Query: 1540 IEQLVATIIEAQIEKLQHKAKHFDELELLMEKEHAGMEEVKDSILTERIDVLRRTFRSGI 1719
IE LVATIIEAQI+K+ K KHFD+LELLMEKEHA ME KDSILTERIDVLRRTFRSG+
Sbjct: 452 IEHLVATIIEAQIDKMLQKVKHFDDLELLMEKEHAEMENKKDSILTERIDVLRRTFRSGV 511
Query: 1720 TRWKDYSYAKS 1752
TRWKDYSY KS
Sbjct: 512 TRWKDYSYVKS 522
>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
gi|297734457|emb|CBI15704.3| unnamed protein product
[Vitis vinifera]
Length = 563
Score = 523 bits (1348), Expect = e-146
Identities = 297/566 (52%), Positives = 364/566 (64%), Gaps = 15/566 (2%)
Frame = +1
Query: 100 MEASKDPNSNPGRIDESDSELELYTIPGSSRWFVWDEIHETEKTAFKEFFDGSSISRTPK 279
ME++ DP+S R DE EL+LYTIP S WF WDEIHE EK + KEFFDGSSISRTPK
Sbjct: 1 MESTPDPSSKLTRHDEP--ELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPK 58
Query: 280 IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTLLRKVFLFLESWGLINYGATSGDDG 459
IYKEYRDFII+KYRE+PSRRLTF E+RKSLVGDV+LL KVFLFLE WGLIN+GA G+D
Sbjct: 59 IYKEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGED- 117
Query: 460 GDAEREHEEERCKVRVEDGAPNGIRVVATPNSLKQLSLPRNTKAGGYNXXXXXXXXXXXX 639
A ER +VR EDGAPNGIRVVA PNSLK +++P G
Sbjct: 118 -SAAVAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNG-EVDENGFRLPPLA 175
Query: 640 XYSDVYGDLMSQKEELNCGLCGDKCGSGRYRSTQDDFIICTKCFKNGNYGEKRSMENFIL 819
YSDV+ DL +K L CG CGD C SG Y + +IC KCFKNGNYGE RS+++F
Sbjct: 176 SYSDVFSDLTKEK-GLVCGNCGDNCDSGHYNCLKGSPVICVKCFKNGNYGENRSVDDFKF 234
Query: 820 DESSEFSGKHSAVWTEGETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL 999
++ +E G AVWTE ETLLLLESVLKHGDDWELV Q+VQTKTKLDCISKLIELPFGEL
Sbjct: 235 NDCNENRGNRGAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGEL 294
Query: 1000 MLGSAHRNGNSNSANGVMNNVKQVQSSSSDHQETSKTQDQSPELKNENEQNGDVVKESPS 1179
MLGS+ G S ++N +++K VQ +S + QE K Q E NE+EQNGD + P
Sbjct: 295 MLGSS--LGKSRASNDNTSSIKPVQ-TSLESQENIKNGGQGDEQINESEQNGDAENQGPP 351
Query: 1180 -KRQRVAALSDSSSSLMEQVGLLSSVVDPHXXXXXXXXXXXXLCDENMCPREIFDVEEDY 1356
KR+ + +LSD+ SLM QV ++S++V PH LCDEN C ++IFD ED
Sbjct: 352 LKRKCITSLSDAGISLMRQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDN 411
Query: 1357 AS------------ARALEGEGLEM-EGSTQSEID-VRCPKDDIPXXXXXXXXXXXXXXX 1494
+ R+L E E+ E SEI K+ IP
Sbjct: 412 VTEELGSPIRNNKLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGA 471
Query: 1495 XXXXXXXXXDQEDREIEQLVATIIEAQIEKLQHKAKHFDELELLMEKEHAGMEEVKDSIL 1674
DQE REIE LVATIIE Q++KL K +HF++LEL+MEKE+ ++E+K+SI+
Sbjct: 472 AAANAKSLADQEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESII 531
Query: 1675 TERIDVLRRTFRSGITRWKDYSYAKS 1752
ERID+L+R F +GI+RW+D KS
Sbjct: 532 AERIDILQRVFNAGISRWRDPISVKS 557
>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
Length = 563
Score = 523 bits (1347), Expect = e-146
Identities = 297/566 (52%), Positives = 364/566 (64%), Gaps = 15/566 (2%)
Frame = +1
Query: 100 MEASKDPNSNPGRIDESDSELELYTIPGSSRWFVWDEIHETEKTAFKEFFDGSSISRTPK 279
ME++ DP+S R DE EL+LYTIP S WF WDEIHE EK + KEFFDGSSISRTPK
Sbjct: 1 MESTPDPSSKLTRHDEP--ELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPK 58
Query: 280 IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTLLRKVFLFLESWGLINYGATSGDDG 459
IYKEYRDFII+KYRE+PSRRLTF E+RKSLVGDV+LL KVFLFLE WGLIN+GA G+D
Sbjct: 59 IYKEYRDFIISKYREDPSRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINFGAPGGED- 117
Query: 460 GDAEREHEEERCKVRVEDGAPNGIRVVATPNSLKQLSLPRNTKAGGYNXXXXXXXXXXXX 639
A ER +VR EDGAPNGIRVVA PNSLK +++P G
Sbjct: 118 -SAAVAEGAERHRVRSEDGAPNGIRVVAMPNSLKPITMPLTLDVNG-EVDENGFRLPPLA 175
Query: 640 XYSDVYGDLMSQKEELNCGLCGDKCGSGRYRSTQDDFIICTKCFKNGNYGEKRSMENFIL 819
YSDV+ DL +K L CG CGD C SG Y + +IC KCFKNGNYGE RS+++F
Sbjct: 176 SYSDVFSDLTKEK-GLVCGNCGDNCDSGHYNCLKGSPVICVKCFKNGNYGENRSVDDFKF 234
Query: 820 DESSEFSGKHSAVWTEGETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGEL 999
++ +E G AVWTE ETLLLLESVLKHGDDWELV Q+VQTKTKLDCISKLIELPFGEL
Sbjct: 235 NDCNENRGNRGAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGEL 294
Query: 1000 MLGSAHRNGNSNSANGVMNNVKQVQSSSSDHQETSKTQDQSPELKNENEQNGDVVKESPS 1179
MLGS+ G S ++N +++K VQ +S + QE K Q E NE+EQNGD + P
Sbjct: 295 MLGSS--LGKSRASNDNTSSIKPVQ-TSLESQENIKNGGQGDEQINESEQNGDAENQGPP 351
Query: 1180 -KRQRVAALSDSSSSLMEQVGLLSSVVDPHXXXXXXXXXXXXLCDENMCPREIFDVEEDY 1356
KR+ + +LSD+ SLM QV ++S++V PH LCDEN C ++IFD ED
Sbjct: 352 LKRKCITSLSDAGISLMXQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDN 411
Query: 1357 AS------------ARALEGEGLEM-EGSTQSEID-VRCPKDDIPXXXXXXXXXXXXXXX 1494
+ R+L E E+ E SEI K+ IP
Sbjct: 412 VTEELGSPIRNNXLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGA 471
Query: 1495 XXXXXXXXXDQEDREIEQLVATIIEAQIEKLQHKAKHFDELELLMEKEHAGMEEVKDSIL 1674
DQE REIE LVATIIE Q++KL K +HF++LEL+MEKE+ ++E+K+SI+
Sbjct: 472 AAANAKSLADQEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESII 531
Query: 1675 TERIDVLRRTFRSGITRWKDYSYAKS 1752
ERID+L+R F +GI+RW+D KS
Sbjct: 532 AERIDILQRVFNAGISRWRDPISVKS 557