BLASTX nr result

ID: Glycyrrhiza24_contig00004377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004377
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538973.1| PREDICTED: transcription elongation regulato...   476   e-132
ref|XP_003538971.1| PREDICTED: transcription elongation regulato...   476   e-132
ref|XP_003607202.1| Transcription elongation regulator [Medicago...   437   e-120
ref|XP_003607201.1| Transcription elongation regulator [Medicago...   437   e-120
ref|XP_003540642.1| PREDICTED: transcription elongation regulato...   417   e-114

>ref|XP_003538973.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 857

 Score =  476 bits (1226), Expect = e-132
 Identities = 245/331 (74%), Positives = 259/331 (78%), Gaps = 2/331 (0%)
 Frame = -1

Query: 989 DSAAQDVSKVTSASSTPHPVPAHISVSSRPPPSDPNYRPATSWMPNAPTFPVHPVMSGTP 810
           DS AQDV K++SASS PH VPAH S S  PPPSDPNYRPATSWMP A +FPV PVM  T 
Sbjct: 3   DSVAQDVGKLSSASSIPHSVPAHTSTSIMPPPSDPNYRPATSWMPTAMSFPVLPVMP-TQ 61

Query: 809 GNPGPPGLAKPAMISSNPAGPSPGTDSPAAAVLRQNMPTAALASDPTATQKGLXXXXXXX 630
           GNPGPPGLA  A+ISSNPA PS GTDS  AA+LR NMPT+A+ASDPTA QKGL       
Sbjct: 62  GNPGPPGLASSAIISSNPAAPSTGTDSSPAALLRPNMPTSAIASDPTAPQKGLPYPSVPA 121

Query: 629 XXXXPQGYWLQPPQMGGVLRPPFLQYXXXXXXXXXXXARGVTLPAVPVPDSQPPGVTPVX 450
               PQG WLQPPQM GVLRPP+LQY           ARGV LPAVP+PDSQPPGVTPV 
Sbjct: 122 MAAPPQGLWLQPPQMSGVLRPPYLQYPAPFPGPFPFPARGVALPAVPIPDSQPPGVTPVG 181

Query: 449 XXXXXXXXXXXGHQPRGTTGLQAEVISGHADDKK-LNAVVALNEDAAN-DQLDAWTAHKT 276
                       HQ RGTT LQ EVISG ADDKK LN+V  +NEDAAN DQLDAWTAHKT
Sbjct: 182 AAGGTSTPSSS-HQLRGTTALQTEVISGPADDKKKLNSVDTVNEDAANNDQLDAWTAHKT 240

Query: 275 ETGIVYYYNALTGESTYDKPAGFKGESHQVSVQPTPVSMVDLPGTDWLLVSTSDGKKYYY 96
           E GI+YYYNA+TGESTYDKPAGFKGESHQVS QP PVSM+DLPGTDW LVSTSDGKKYYY
Sbjct: 241 EAGIIYYYNAVTGESTYDKPAGFKGESHQVSAQPIPVSMMDLPGTDWRLVSTSDGKKYYY 300

Query: 95  NNRTKTSCWQIPNEVAELKKKQDGDVTKDHL 3
           NNRTKTSCWQIPNEVAELKKKQDGDVTKDHL
Sbjct: 301 NNRTKTSCWQIPNEVAELKKKQDGDVTKDHL 331


>ref|XP_003538971.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 1007

 Score =  476 bits (1226), Expect = e-132
 Identities = 245/331 (74%), Positives = 259/331 (78%), Gaps = 2/331 (0%)
 Frame = -1

Query: 989  DSAAQDVSKVTSASSTPHPVPAHISVSSRPPPSDPNYRPATSWMPNAPTFPVHPVMSGTP 810
            DS AQDV K++SASS PH VPAH S S  PPPSDPNYRPATSWMP A +FPV PVM  T 
Sbjct: 153  DSVAQDVGKLSSASSIPHSVPAHTSTSIMPPPSDPNYRPATSWMPTAMSFPVLPVMP-TQ 211

Query: 809  GNPGPPGLAKPAMISSNPAGPSPGTDSPAAAVLRQNMPTAALASDPTATQKGLXXXXXXX 630
            GNPGPPGLA  A+ISSNPA PS GTDS  AA+LR NMPT+A+ASDPTA QKGL       
Sbjct: 212  GNPGPPGLASSAIISSNPAAPSTGTDSSPAALLRPNMPTSAIASDPTAPQKGLPYPSVPA 271

Query: 629  XXXXPQGYWLQPPQMGGVLRPPFLQYXXXXXXXXXXXARGVTLPAVPVPDSQPPGVTPVX 450
                PQG WLQPPQM GVLRPP+LQY           ARGV LPAVP+PDSQPPGVTPV 
Sbjct: 272  MAAPPQGLWLQPPQMSGVLRPPYLQYPAPFPGPFPFPARGVALPAVPIPDSQPPGVTPVG 331

Query: 449  XXXXXXXXXXXGHQPRGTTGLQAEVISGHADDKK-LNAVVALNEDAAN-DQLDAWTAHKT 276
                        HQ RGTT LQ EVISG ADDKK LN+V  +NEDAAN DQLDAWTAHKT
Sbjct: 332  AAGGTSTPSSS-HQLRGTTALQTEVISGPADDKKKLNSVDTVNEDAANNDQLDAWTAHKT 390

Query: 275  ETGIVYYYNALTGESTYDKPAGFKGESHQVSVQPTPVSMVDLPGTDWLLVSTSDGKKYYY 96
            E GI+YYYNA+TGESTYDKPAGFKGESHQVS QP PVSM+DLPGTDW LVSTSDGKKYYY
Sbjct: 391  EAGIIYYYNAVTGESTYDKPAGFKGESHQVSAQPIPVSMMDLPGTDWRLVSTSDGKKYYY 450

Query: 95   NNRTKTSCWQIPNEVAELKKKQDGDVTKDHL 3
            NNRTKTSCWQIPNEVAELKKKQDGDVTKDHL
Sbjct: 451  NNRTKTSCWQIPNEVAELKKKQDGDVTKDHL 481


>ref|XP_003607202.1| Transcription elongation regulator [Medicago truncatula]
            gi|355508257|gb|AES89399.1| Transcription elongation
            regulator [Medicago truncatula]
          Length = 745

 Score =  437 bits (1124), Expect = e-120
 Identities = 235/357 (65%), Positives = 245/357 (68%), Gaps = 29/357 (8%)
 Frame = -1

Query: 989  DSAAQDVSKVTSASSTPHPVPAHISVSSRPPPSDPNYRPATSWMPNAPTFPVHPVMSGTP 810
            DS  QD SKV SAS   H  PA  S+S+  P SDPNYRP T WMP APTFP+HPVM GTP
Sbjct: 115  DSVTQDFSKVPSASINLHSAPAPTSISAMAPRSDPNYRPTTLWMPTAPTFPIHPVMPGTP 174

Query: 809  GNPGPPGLAKPAMISSNPAGPSPGTDSPAAAVLRQNMPTAALASDPTATQKG-LXXXXXX 633
            G PGPPGL KP MI SNPA PS  T  P+AAV RQNMPTA   SDP A+ +G L      
Sbjct: 175  GTPGPPGLTKPVMIPSNPAAPST-TGFPSAAVPRQNMPTA---SDPNASHRGGLPYPPIP 230

Query: 632  XXXXXPQGYWLQPPQMGGVLRPPFLQYXXXXXXXXXXXARGVTLPAVPVPDSQPPGVTPV 453
                 PQGYWLQPPQM GVLRPPF QY           ARG  LPAVPVPDSQPPGVTPV
Sbjct: 231  SMVAPPQGYWLQPPQMSGVLRPPFHQYPAAFPGPFPFPARGGALPAVPVPDSQPPGVTPV 290

Query: 452  XXXXXXXXXXXXGHQPRGTTGLQAEVISGHADDK-KLNAVVALNEDAANDQLDAWTAHKT 276
                         H  RGT+G+Q EVIS H DDK KLNA V  NEDAANDQLDAWTAHKT
Sbjct: 291  GAASISAPSSSN-HLLRGTSGVQTEVISAHTDDKHKLNATVTQNEDAANDQLDAWTAHKT 349

Query: 275  ETGIVYYYNALTGESTYDKPAGFKGESHQVSVQPTPVSMVDLPGTDWLLVSTSDGKKYYY 96
            E GIVYYYNALTG+STYDKPAGFKGE+HQVSVQPTPVSMVDLPGTDW LVSTSDGKKYYY
Sbjct: 350  EAGIVYYYNALTGQSTYDKPAGFKGEAHQVSVQPTPVSMVDLPGTDWQLVSTSDGKKYYY 409

Query: 95   NNRTK---------------------------TSCWQIPNEVAELKKKQDGDVTKDH 6
            NNRTK                           TSCWQIPNEVAELKKKQD DVTKDH
Sbjct: 410  NNRTKRNKTGAENSWTIQQAAEYNHNQKQHINTSCWQIPNEVAELKKKQDSDVTKDH 466


>ref|XP_003607201.1| Transcription elongation regulator [Medicago truncatula]
            gi|355508256|gb|AES89398.1| Transcription elongation
            regulator [Medicago truncatula]
          Length = 1013

 Score =  437 bits (1124), Expect = e-120
 Identities = 235/357 (65%), Positives = 245/357 (68%), Gaps = 29/357 (8%)
 Frame = -1

Query: 989  DSAAQDVSKVTSASSTPHPVPAHISVSSRPPPSDPNYRPATSWMPNAPTFPVHPVMSGTP 810
            DS  QD SKV SAS   H  PA  S+S+  P SDPNYRP T WMP APTFP+HPVM GTP
Sbjct: 115  DSVTQDFSKVPSASINLHSAPAPTSISAMAPRSDPNYRPTTLWMPTAPTFPIHPVMPGTP 174

Query: 809  GNPGPPGLAKPAMISSNPAGPSPGTDSPAAAVLRQNMPTAALASDPTATQKG-LXXXXXX 633
            G PGPPGL KP MI SNPA PS  T  P+AAV RQNMPTA   SDP A+ +G L      
Sbjct: 175  GTPGPPGLTKPVMIPSNPAAPST-TGFPSAAVPRQNMPTA---SDPNASHRGGLPYPPIP 230

Query: 632  XXXXXPQGYWLQPPQMGGVLRPPFLQYXXXXXXXXXXXARGVTLPAVPVPDSQPPGVTPV 453
                 PQGYWLQPPQM GVLRPPF QY           ARG  LPAVPVPDSQPPGVTPV
Sbjct: 231  SMVAPPQGYWLQPPQMSGVLRPPFHQYPAAFPGPFPFPARGGALPAVPVPDSQPPGVTPV 290

Query: 452  XXXXXXXXXXXXGHQPRGTTGLQAEVISGHADDK-KLNAVVALNEDAANDQLDAWTAHKT 276
                         H  RGT+G+Q EVIS H DDK KLNA V  NEDAANDQLDAWTAHKT
Sbjct: 291  GAASISAPSSSN-HLLRGTSGVQTEVISAHTDDKHKLNATVTQNEDAANDQLDAWTAHKT 349

Query: 275  ETGIVYYYNALTGESTYDKPAGFKGESHQVSVQPTPVSMVDLPGTDWLLVSTSDGKKYYY 96
            E GIVYYYNALTG+STYDKPAGFKGE+HQVSVQPTPVSMVDLPGTDW LVSTSDGKKYYY
Sbjct: 350  EAGIVYYYNALTGQSTYDKPAGFKGEAHQVSVQPTPVSMVDLPGTDWQLVSTSDGKKYYY 409

Query: 95   NNRTK---------------------------TSCWQIPNEVAELKKKQDGDVTKDH 6
            NNRTK                           TSCWQIPNEVAELKKKQD DVTKDH
Sbjct: 410  NNRTKRNKTGAENSWTIQQAAEYNHNQKQHINTSCWQIPNEVAELKKKQDSDVTKDH 466


>ref|XP_003540642.1| PREDICTED: transcription elongation regulator 1-like [Glycine max]
          Length = 930

 Score =  417 bits (1072), Expect = e-114
 Identities = 220/329 (66%), Positives = 235/329 (71%), Gaps = 2/329 (0%)
 Frame = -1

Query: 983 AAQDVSKVTSASSTPHPVPAHISVSSRPPPSDPNYRPATSWMPNAPTFPVHPVMSGTPGN 804
           ++ DVSK++SASS PH VPAH S S  PPPSDPNY PATSWMP A +FPVHPVM  T GN
Sbjct: 112 SSTDVSKLSSASSIPHSVPAHTSTSLMPPPSDPNYCPATSWMPTALSFPVHPVMP-TQGN 170

Query: 803 PGPPGLAKPAMISSNPAGPSPGTDSPAAAVLRQNMPTAALASDPTATQKGLXXXXXXXXX 624
           PGPPGLA  A+ISSNPA PS                  ALA+ P                
Sbjct: 171 PGPPGLASSAIISSNPAAPS----------------IPALAAPP---------------- 198

Query: 623 XXPQGYWLQPPQMGGVLRPPFLQYXXXXXXXXXXXARGVTLPAVPVPDSQPPGVTPVXXX 444
              QG WLQPPQM GVLRPP+LQY           ARGV LPAVP+PDSQPPGVTPV   
Sbjct: 199 ---QGLWLQPPQMSGVLRPPYLQYPAPFPGPFPFPARGVALPAVPIPDSQPPGVTPVGAA 255

Query: 443 XXXXXXXXXGHQPRGTTGLQAEVISGHADDKK-LNAVVALNEDAAN-DQLDAWTAHKTET 270
                     +Q RGTT LQ EVISG ADDKK LN+V  LNEDAAN DQLDAWTAHKTE 
Sbjct: 256 GGTPTPSASSYQLRGTTALQTEVISGSADDKKKLNSVDTLNEDAANNDQLDAWTAHKTEA 315

Query: 269 GIVYYYNALTGESTYDKPAGFKGESHQVSVQPTPVSMVDLPGTDWLLVSTSDGKKYYYNN 90
           GI+YYYNA+TGESTY KP+GFKGESHQVS QPTPVSM+DLPGTDW LVSTSDGKKYYYNN
Sbjct: 316 GIIYYYNAVTGESTYHKPSGFKGESHQVSAQPTPVSMIDLPGTDWRLVSTSDGKKYYYNN 375

Query: 89  RTKTSCWQIPNEVAELKKKQDGDVTKDHL 3
            TKTSCWQIPNEVAELKKKQDGDVTKDHL
Sbjct: 376 LTKTSCWQIPNEVAELKKKQDGDVTKDHL 404


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