BLASTX nr result

ID: Glycyrrhiza24_contig00004361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004361
         (1609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614117.1| Ribosome maturation factor rimP [Medicago tr...   370   e-100
ref|XP_003518776.1| PREDICTED: uncharacterized protein LOC100806...   369   e-99 
gb|AFK43509.1| unknown [Medicago truncatula]                          364   4e-98
emb|CBI27304.3| unnamed protein product [Vitis vinifera]              296   1e-77
ref|XP_002273771.1| PREDICTED: uncharacterized protein LOC100259...   296   1e-77

>ref|XP_003614117.1| Ribosome maturation factor rimP [Medicago truncatula]
            gi|355515452|gb|AES97075.1| Ribosome maturation factor
            rimP [Medicago truncatula]
          Length = 282

 Score =  370 bits (950), Expect = e-100
 Identities = 196/283 (69%), Positives = 215/283 (75%), Gaps = 4/283 (1%)
 Frame = -2

Query: 1557 MAMA-RGVITRMRNVVGAAXXXXXXXXXXXXXF--QNPSHSPPTSHLLAFSTATPHTSFS 1387
            MAMA R +I + RN++G               F  QN   SPP SH+L FST  PHTSFS
Sbjct: 1    MAMAARCMIQKTRNIIGGVTLLLRSTSRSSHSFILQNRYLSPPNSHILPFST--PHTSFS 58

Query: 1386 RHFSVETC-ETSXXXXXXXXXXXXXXXXXXXXXGGNGGGVALQNVPWGQRAHSIAEEVLR 1210
            RHFS     ETS                     GGNGGGV LQNVPWGQRAHSIAEEVL 
Sbjct: 59   RHFSPSLSDETSDEGASTDGWEEEDETDPKIGDGGNGGGVVLQNVPWGQRAHSIAEEVLV 118

Query: 1209 QFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRLDEVGALGEIPD 1030
            QFSED+KL+AFKTSPRGYVYVRLDKLT +YGCPSMEEL+ YNQEFKKRLDEVGALGEIPD
Sbjct: 119  QFSEDLKLFAFKTSPRGYVYVRLDKLTTKYGCPSMEELDSYNQEFKKRLDEVGALGEIPD 178

Query: 1029 DLALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFLLDSIEIDSEIC 850
            DL LEVSSPG +RILKVPDDL+RFK+MPMRV Y EN ESNC E DGVFLLDSIEIDSE+C
Sbjct: 179  DLGLEVSSPGLDRILKVPDDLNRFKEMPMRVCYAENIESNCREVDGVFLLDSIEIDSEVC 238

Query: 849  VWKLANVKENRDPQRKGRPLSRKQKDWRLRLPFNMHRMVTLYL 721
            VWKLA+VKENRD   KG+PL+RKQKDWRLRLPFN+HRMVT+Y+
Sbjct: 239  VWKLADVKENRDATIKGKPLNRKQKDWRLRLPFNLHRMVTMYI 281


>ref|XP_003518776.1| PREDICTED: uncharacterized protein LOC100806065 [Glycine max]
          Length = 279

 Score =  369 bits (948), Expect = e-99
 Identities = 195/282 (69%), Positives = 214/282 (75%), Gaps = 3/282 (1%)
 Frame = -2

Query: 1557 MAMARGVITRMRNVVGAAXXXXXXXXXXXXXF---QNPSHSPPTSHLLAFSTATPHTSFS 1387
            MAMARG++ RMRN VGA                     S SP  SHL +FS+ T   SFS
Sbjct: 1    MAMARGIVRRMRNTVGAVLLLRSSTTTTHSHSFHFYKDSLSPLESHLCSFSS-TFLRSFS 59

Query: 1386 RHFSVETCETSXXXXXXXXXXXXXXXXXXXXXGGNGGGVALQNVPWGQRAHSIAEEVLRQ 1207
             HF  ET +                        G+GGGVALQNVPWGQRA SIAEEVL Q
Sbjct: 60   HHFPDETTDEGASTDGWEEEDEVEPKIGDG---GDGGGVALQNVPWGQRALSIAEEVLMQ 116

Query: 1206 FSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRLDEVGALGEIPDD 1027
            FSEDIKL+AFKT+PRGYVYVRLDKLT+EYGCPSMEELECYNQ++K RLDEVGALGEIPDD
Sbjct: 117  FSEDIKLFAFKTTPRGYVYVRLDKLTHEYGCPSMEELECYNQKYKTRLDEVGALGEIPDD 176

Query: 1026 LALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFLLDSIEIDSEICV 847
            LALEVSSPGAER+LKVPDD+SRFKD+PMRV YTEN ESNC E DGVFLLDSIE DSE+CV
Sbjct: 177  LALEVSSPGAERLLKVPDDISRFKDLPMRVCYTENIESNCPEKDGVFLLDSIENDSEMCV 236

Query: 846  WKLANVKENRDPQRKGRPLSRKQKDWRLRLPFNMHRMVTLYL 721
            WKLA+VKENRDP +KGRPLSRKQKDWRL+LPFN+HRMVTLYL
Sbjct: 237  WKLADVKENRDPLKKGRPLSRKQKDWRLQLPFNLHRMVTLYL 278


>gb|AFK43509.1| unknown [Medicago truncatula]
          Length = 282

 Score =  364 bits (934), Expect = 4e-98
 Identities = 194/281 (69%), Positives = 212/281 (75%), Gaps = 4/281 (1%)
 Frame = -2

Query: 1557 MAMA-RGVITRMRNVVGAAXXXXXXXXXXXXXF--QNPSHSPPTSHLLAFSTATPHTSFS 1387
            MAMA R +I + RN++G               F  QN   SPP SH+L FST  PHTSFS
Sbjct: 1    MAMAARCMIQKTRNIIGGVTLLLRSTSRSSHSFILQNRYLSPPNSHILPFST--PHTSFS 58

Query: 1386 RHFSVETC-ETSXXXXXXXXXXXXXXXXXXXXXGGNGGGVALQNVPWGQRAHSIAEEVLR 1210
            RHFS     ETS                     GGNGGGV LQNVPWGQRAHSIAEEVL 
Sbjct: 59   RHFSPSLSDETSDEGASTDGWEEEDETDPKIGDGGNGGGVVLQNVPWGQRAHSIAEEVLV 118

Query: 1209 QFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPSMEELECYNQEFKKRLDEVGALGEIPD 1030
            QFSED+KL+AFKTSPRGYVYVRLDKLT +YGCPSMEEL+ YNQEFKKRLDEVGALGEIPD
Sbjct: 119  QFSEDLKLFAFKTSPRGYVYVRLDKLTTKYGCPSMEELDSYNQEFKKRLDEVGALGEIPD 178

Query: 1029 DLALEVSSPGAERILKVPDDLSRFKDMPMRVFYTENTESNCSEGDGVFLLDSIEIDSEIC 850
            DL LEVSSPG +RILKVPDDL+RFK+MPMRV Y EN ESNC E  GVFLLDSIEIDSE+C
Sbjct: 179  DLGLEVSSPGLDRILKVPDDLNRFKEMPMRVCYAENIESNCREVGGVFLLDSIEIDSEVC 238

Query: 849  VWKLANVKENRDPQRKGRPLSRKQKDWRLRLPFNMHRMVTL 727
            VWKLA+VKENRD   KG+PL+RKQKDWRLRLPFN+HRMVT+
Sbjct: 239  VWKLADVKENRDATIKGKPLNRKQKDWRLRLPFNLHRMVTM 279


>emb|CBI27304.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  296 bits (758), Expect = 1e-77
 Identities = 139/191 (72%), Positives = 164/191 (85%)
 Frame = -2

Query: 1287 GNGGGVALQNVPWGQRAHSIAEEVLRQFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPS 1108
            G+GGG+ LQNVPWG+R  SIA EVL QF  D++L++FKT+PRGY+YVRLDKL+N+YGCPS
Sbjct: 120  GDGGGIVLQNVPWGERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPS 179

Query: 1107 MEELECYNQEFKKRLDEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVFYT 928
            MEE+E YN E+KK+LDE+GALGEIP +LA+EVSSPGAER+LKVPDDL RFKDMPMRV Y 
Sbjct: 180  MEEIERYNLEYKKKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYV 239

Query: 927  ENTESNCSEGDGVFLLDSIEIDSEICVWKLANVKENRDPQRKGRPLSRKQKDWRLRLPFN 748
            E+ E+ C E DGVF+L+SI+ +S  CVWKLANV+ENRDP  KGRPLSRKQKDWRL LPF 
Sbjct: 240  EDVETQCLEKDGVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRKQKDWRLNLPFE 299

Query: 747  MHRMVTLYLGY 715
            M R VTLYL Y
Sbjct: 300  MFRRVTLYLEY 310


>ref|XP_002273771.1| PREDICTED: uncharacterized protein LOC100259261 [Vitis vinifera]
          Length = 223

 Score =  296 bits (758), Expect = 1e-77
 Identities = 139/191 (72%), Positives = 164/191 (85%)
 Frame = -2

Query: 1287 GNGGGVALQNVPWGQRAHSIAEEVLRQFSEDIKLYAFKTSPRGYVYVRLDKLTNEYGCPS 1108
            G+GGG+ LQNVPWG+R  SIA EVL QF  D++L++FKT+PRGY+YVRLDKL+N+YGCPS
Sbjct: 33   GDGGGIVLQNVPWGERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPS 92

Query: 1107 MEELECYNQEFKKRLDEVGALGEIPDDLALEVSSPGAERILKVPDDLSRFKDMPMRVFYT 928
            MEE+E YN E+KK+LDE+GALGEIP +LA+EVSSPGAER+LKVPDDL RFKDMPMRV Y 
Sbjct: 93   MEEIERYNLEYKKKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYV 152

Query: 927  ENTESNCSEGDGVFLLDSIEIDSEICVWKLANVKENRDPQRKGRPLSRKQKDWRLRLPFN 748
            E+ E+ C E DGVF+L+SI+ +S  CVWKLANV+ENRDP  KGRPLSRKQKDWRL LPF 
Sbjct: 153  EDVETQCLEKDGVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRKQKDWRLNLPFE 212

Query: 747  MHRMVTLYLGY 715
            M R VTLYL Y
Sbjct: 213  MFRRVTLYLEY 223