BLASTX nr result

ID: Glycyrrhiza24_contig00004360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004360
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4...   431   e-118
ref|XP_003589079.1| U-box domain-containing protein [Medicago tr...   431   e-118
gb|AFK46109.1| unknown [Medicago truncatula]                          424   e-116
ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   411   e-112
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   391   e-106

>ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 352

 Score =  431 bits (1108), Expect = e-118
 Identities = 250/349 (71%), Positives = 262/349 (75%), Gaps = 5/349 (1%)
 Frame = -2

Query: 1295 AFSDCNSDRSGEFATASSQSRRLLIACASENSDELIRQXXXXXXXXXXXDQKQAAMEIRL 1116
            AFSDCNSDRSGEFATASSQ+RR LIACA+ENSD+LIRQ           DQKQAAMEIRL
Sbjct: 26   AFSDCNSDRSGEFATASSQTRRFLIACATENSDDLIRQLVADLHSSSIDDQKQAAMEIRL 85

Query: 1115 LAKNKPENRIRIAKAGAIKPLISLICSQDLQLQEYGVTAILNLSLCDENKELIASSGAIK 936
            LAKNKPENRI+IAKAGAIKPLISLI S DLQLQEYGVTAILNLSLCDENKE+IASSGAIK
Sbjct: 86   LAKNKPENRIKIAKAGAIKPLISLISSPDLQLQEYGVTAILNLSLCDENKEVIASSGAIK 145

Query: 935  PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLESGGIRGKKDAST 756
            PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLV+LLESGG R KKDAST
Sbjct: 146  PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVSLLESGGFRAKKDAST 205

Query: 755  ALYSLCTVRENKIRAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
            ALYSLCTV+ENKIRAVK                                           
Sbjct: 206  ALYSLCTVKENKIRAVK----------------------AGIMKVLVELMADFESNMVDK 243

Query: 575  XXXXVSVLVSVPEAKAALXXXXXXXXXXXXXXXGSQRQKEIAAVILLQLCEDSVAYRTMV 396
                VSVLV+VPEA+ AL               G+QRQKEIA VILLQ+CEDSV YRTMV
Sbjct: 244  SAYVVSVLVAVPEARVALVEEGGVPVLVEIVEVGTQRQKEIAVVILLQVCEDSVTYRTMV 303

Query: 395  AREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSGR-----TSEVVA 264
            AREGAIPPLVAL+QSGTNRAKQKAEKLIELLRQPRSG      TSEVVA
Sbjct: 304  AREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSGNGAARSTSEVVA 352


>ref|XP_003589079.1| U-box domain-containing protein [Medicago truncatula]
            gi|355478127|gb|AES59330.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 336

 Score =  431 bits (1107), Expect = e-118
 Identities = 246/341 (72%), Positives = 259/341 (75%)
 Frame = -2

Query: 1295 AFSDCNSDRSGEFATASSQSRRLLIACASENSDELIRQXXXXXXXXXXXDQKQAAMEIRL 1116
            AFSDCNSDRSGEFAT SS SRRL +ACASENSD+LIRQ           +QKQAAMEIRL
Sbjct: 18   AFSDCNSDRSGEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSDSIEEQKQAAMEIRL 77

Query: 1115 LAKNKPENRIRIAKAGAIKPLISLICSQDLQLQEYGVTAILNLSLCDENKELIASSGAIK 936
            LAKNKPENRI+IAKAGAIKPLISL+ SQDLQLQEYGVTAILNLSLCDENKELIASSGAIK
Sbjct: 78   LAKNKPENRIKIAKAGAIKPLISLVTSQDLQLQEYGVTAILNLSLCDENKELIASSGAIK 137

Query: 935  PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLESGGIRGKKDAST 756
            PLVRALNSGT+TAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLL SGGIRGKKDAST
Sbjct: 138  PLVRALNSGTSTAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLGSGGIRGKKDAST 197

Query: 755  ALYSLCTVRENKIRAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
            ALY+LC+V+ENK+RAVK                                           
Sbjct: 198  ALYTLCSVKENKMRAVK----------------------AGIMKVLVELMADFESNMVDK 235

Query: 575  XXXXVSVLVSVPEAKAALXXXXXXXXXXXXXXXGSQRQKEIAAVILLQLCEDSVAYRTMV 396
                +SVLVSVPEAK AL               GSQRQKEIAAVILLQ+CEDSVA R+MV
Sbjct: 236  SAYVLSVLVSVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDSVAVRSMV 295

Query: 395  AREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSGRTSE 273
            AREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRS R SE
Sbjct: 296  AREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSTRISE 336


>gb|AFK46109.1| unknown [Medicago truncatula]
          Length = 344

 Score =  424 bits (1089), Expect = e-116
 Identities = 243/341 (71%), Positives = 256/341 (75%)
 Frame = -2

Query: 1295 AFSDCNSDRSGEFATASSQSRRLLIACASENSDELIRQXXXXXXXXXXXDQKQAAMEIRL 1116
            AFSDCNSDRSGEFAT SS SRRL +ACASENSD+LIRQ           +QKQAAMEIRL
Sbjct: 26   AFSDCNSDRSGEFATTSSTSRRLFLACASENSDDLIRQLVSDLHSDSIEEQKQAAMEIRL 85

Query: 1115 LAKNKPENRIRIAKAGAIKPLISLICSQDLQLQEYGVTAILNLSLCDENKELIASSGAIK 936
            LAKNKPENRI+IAKA AIKPLISL+ SQDLQLQEYGVTAILNLSLCDENKELIASSGAIK
Sbjct: 86   LAKNKPENRIKIAKADAIKPLISLVTSQDLQLQEYGVTAILNLSLCDENKELIASSGAIK 145

Query: 935  PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLESGGIRGKKDAST 756
            PLVRALNSGT+TAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLL SGGIRGKKDAST
Sbjct: 146  PLVRALNSGTSTAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLGSGGIRGKKDAST 205

Query: 755  ALYSLCTVRENKIRAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
            ALY+LC+V+ENK+RAVK                                           
Sbjct: 206  ALYTLCSVKENKMRAVK----------------------AGIMKVLVELMADFESNMVDK 243

Query: 575  XXXXVSVLVSVPEAKAALXXXXXXXXXXXXXXXGSQRQKEIAAVILLQLCEDSVAYRTMV 396
                +SVLVSVPEAK AL               GSQRQKEIAAVILLQ+CEDSVA R+MV
Sbjct: 244  SAYVLSVLVSVPEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDSVAVRSMV 303

Query: 395  AREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSGRTSE 273
            AREGAIPPLV LTQSGTNRAKQKAEKLIE LRQPRS R SE
Sbjct: 304  AREGAIPPLVVLTQSGTNRAKQKAEKLIEPLRQPRSTRISE 344


>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
            gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
            domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  411 bits (1057), Expect = e-112
 Identities = 234/337 (69%), Positives = 252/337 (74%)
 Frame = -2

Query: 1295 AFSDCNSDRSGEFATASSQSRRLLIACASENSDELIRQXXXXXXXXXXXDQKQAAMEIRL 1116
            AFSDCNSDRSGEF TASSQSRRLLIACAS+NSDELIR            +QKQAAMEIRL
Sbjct: 27   AFSDCNSDRSGEFPTASSQSRRLLIACASDNSDELIRHLVLDLESCSIEEQKQAAMEIRL 86

Query: 1115 LAKNKPENRIRIAKAGAIKPLISLICSQDLQLQEYGVTAILNLSLCDENKELIASSGAIK 936
            LAKNKPENR++IAKAGA++PLISLI   D QLQEYGVTAILNLSLCDENKELIA+SGAIK
Sbjct: 87   LAKNKPENRLKIAKAGAVRPLISLISCTDPQLQEYGVTAILNLSLCDENKELIAASGAIK 146

Query: 935  PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLESGGIRGKKDAST 756
            PLVRAL SGT TAKENAACALLRLSQ+EENK AIGRSGAIPLLVNLLE+GG RGKKDAST
Sbjct: 147  PLVRALMSGTPTAKENAACALLRLSQMEENKIAIGRSGAIPLLVNLLENGGFRGKKDAST 206

Query: 755  ALYSLCTVRENKIRAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
            ALYSLC+V+ENKIRAVK                                           
Sbjct: 207  ALYSLCSVKENKIRAVK----------------------AGIMRPLVELMADFGSNMVDK 244

Query: 575  XXXXVSVLVSVPEAKAALXXXXXXXXXXXXXXXGSQRQKEIAAVILLQLCEDSVAYRTMV 396
                +SVLVS+ EA++AL               G+QRQKEIAAVILLQ+CEDSV YRTMV
Sbjct: 245  SAFVLSVLVSMSEARSALVEEGGIPVLVELVEDGTQRQKEIAAVILLQICEDSVLYRTMV 304

Query: 395  AREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSG 285
            AREGAIPPLVAL+QSGTNRAKQKAEKLIELLRQPRSG
Sbjct: 305  AREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSG 341



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
 Frame = -2

Query: 1145 QKQAAMEIRLLAKNKPENRIRIAKAGAIKPLISLICSQDLQLQEYGVTAILNLSLCDENK 966
            +K A+  +  L   K EN+IR  KAG ++PL+ L+      + +     +  L    E +
Sbjct: 201  KKDASTALYSLCSVK-ENKIRAVKAGIMRPLVELMADFGSNMVDKSAFVLSVLVSMSEAR 259

Query: 965  ELIASSGAIKPLVRALNSGTATAKENAACALLRLSQVEE-NKAAIGRSGAIPLLVNLLES 789
              +   G I  LV  +  GT   KE AA  LL++ +     +  + R GAIP LV L +S
Sbjct: 260  SALVEEGGIPVLVELVEDGTQRQKEIAAVILLQICEDSVLYRTMVAREGAIPPLVALSQS 319

Query: 788  GGIRGKKDASTALYSLCTVRENKIRA 711
            G  R K+ A   +  L   R     A
Sbjct: 320  GTNRAKQKAEKLIELLRQPRSGNYAA 345


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 352

 Score =  391 bits (1005), Expect = e-106
 Identities = 219/340 (64%), Positives = 246/340 (72%)
 Frame = -2

Query: 1295 AFSDCNSDRSGEFATASSQSRRLLIACASENSDELIRQXXXXXXXXXXXDQKQAAMEIRL 1116
            AFSDCNSDRSGEF TASS+SRRLLIACA+ENSD+ IRQ           +QKQAAMEIRL
Sbjct: 27   AFSDCNSDRSGEFPTASSESRRLLIACAAENSDDFIRQLVLDLESCSIDEQKQAAMEIRL 86

Query: 1115 LAKNKPENRIRIAKAGAIKPLISLICSQDLQLQEYGVTAILNLSLCDENKELIASSGAIK 936
            LAKNKPENR++I KAGA+KPLISLI   D QLQEYGVTAILNLSLCDENKE+IASSGAIK
Sbjct: 87   LAKNKPENRLKIVKAGALKPLISLISCSDSQLQEYGVTAILNLSLCDENKEVIASSGAIK 146

Query: 935  PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVNLLESGGIRGKKDAST 756
            PLVRAL +GT+TAKENAACALLRLSQVEENK AIGRSG+IPLLVNLLE+GG RGKKDA+T
Sbjct: 147  PLVRALKTGTSTAKENAACALLRLSQVEENKVAIGRSGSIPLLVNLLETGGFRGKKDAAT 206

Query: 755  ALYSLCTVRENKIRAVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
            ALYSLC+V+ENK+RAV+                                           
Sbjct: 207  ALYSLCSVKENKMRAVQ----------------------AGIMKPLVELMADFESNMVDK 244

Query: 575  XXXXVSVLVSVPEAKAALXXXXXXXXXXXXXXXGSQRQKEIAAVILLQLCEDSVAYRTMV 396
                +S+LVSV EA+ AL               GSQRQKEIA  ILLQ+CED++  R MV
Sbjct: 245  SAFVLSLLVSVTEARTALVEEGGIPVLVEIIEVGSQRQKEIAVAILLQICEDNLMRRAMV 304

Query: 395  AREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSGRTS 276
             REGAIPPL+AL+QSGTNRAKQKAE LI+LLRQPRSG  +
Sbjct: 305  VREGAIPPLIALSQSGTNRAKQKAETLIDLLRQPRSGNAA 344


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