BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004340
         (1961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cy...   419   e-114
ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cy...   415   e-113
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207...   370   e-100
ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|2...   362   2e-97
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi...   348   2e-93

>ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
            nuclear-like [Glycine max]
          Length = 425

 Score =  419 bits (1077), Expect = e-114
 Identities = 215/259 (83%), Positives = 229/259 (88%), Gaps = 1/259 (0%)
 Frame = -2

Query: 1822 MDPLKKRKLDENGFGGGEP-DHLKLSPSDARKMIERFTPDQLLDILQDAVSHHSDVLAAV 1646
            MDP KKRKLDENGF   +  D LKLSPS+ RK+IERFT DQLLDILQDAV+ H DVLAAV
Sbjct: 1    MDPTKKRKLDENGFNNNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAV 60

Query: 1645 RSVADPDVSQRKLFIRGLGWDTTTDGLRSLFSAYGELEEAVVILDKATGKSKGYGFVTFR 1466
            R+VADPDVSQRKLFIRGLGWDTTTDGLRSLFS +G+LEEAVVILDKATGKSKGYGFVTFR
Sbjct: 61   RAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFR 120

Query: 1465 HVDGALLALREPSKRIDGRVTVTQLXXXXXXXXXXXXADIALRKIYVANVPPDLPADKLL 1286
            HVDGALLALREPSKRIDGRVTVTQL            AD+ALRKIYVANVPPDLPADKLL
Sbjct: 121  HVDGALLALREPSKRIDGRVTVTQLAAAGNSASNVNPADVALRKIYVANVPPDLPADKLL 180

Query: 1285 AHFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQSALLDPVKTVEGRQLNCKLAIT 1106
            AHFS+YGEIEEGPLGFDKQTGKSKGFALFVYK+PEGAQ+AL+DPVKTVEGRQL+CKLAIT
Sbjct: 181  AHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKLAIT 240

Query: 1105 DGKQGKRGAGAGPDAVQGH 1049
            DGKQGKR    GPD+ Q H
Sbjct: 241  DGKQGKR---VGPDSAQAH 256



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 42/62 (67%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
 Frame = -2

Query: 670 LYRLPXXXXXXXXXG--YPESGHYSLSASSGYQNQHHHPPTGASPVPRVPPGSMYPNVPP 497
           +YRLP            YP+SGHY LSASSGYQNQHH PP+G SP+PRVPPGSMYPN+PP
Sbjct: 365 MYRLPGSGGMPAGGTGGYPDSGHYGLSASSGYQNQHH-PPSGTSPMPRVPPGSMYPNMPP 423

Query: 496 YY 491
           YY
Sbjct: 424 YY 425


>ref|XP_003541062.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
            nuclear-like [Glycine max]
          Length = 437

 Score =  415 bits (1067), Expect = e-113
 Identities = 212/259 (81%), Positives = 228/259 (88%), Gaps = 1/259 (0%)
 Frame = -2

Query: 1822 MDPLKKRKLDENGF-GGGEPDHLKLSPSDARKMIERFTPDQLLDILQDAVSHHSDVLAAV 1646
            MDP KKRKLDENGF      + LKLSPSDARK+IERFT DQLLDILQD V+ H DVLAAV
Sbjct: 1    MDPTKKRKLDENGFINNDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDVLAAV 60

Query: 1645 RSVADPDVSQRKLFIRGLGWDTTTDGLRSLFSAYGELEEAVVILDKATGKSKGYGFVTFR 1466
            R+V+DPDVSQRKLFIRGLGWDTTTDGLRSLFS YG+LEEAVVILDKATGKSKGYGFVTFR
Sbjct: 61   RAVSDPDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFR 120

Query: 1465 HVDGALLALREPSKRIDGRVTVTQLXXXXXXXXXXXXADIALRKIYVANVPPDLPADKLL 1286
            HVDGALLALREPSKRIDGRVTVTQL             D+ALRKIYVANVPPDLPADKLL
Sbjct: 121  HVDGALLALREPSKRIDGRVTVTQLAAAGNSALNANAVDVALRKIYVANVPPDLPADKLL 180

Query: 1285 AHFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQSALLDPVKTVEGRQLNCKLAIT 1106
            AHFS+YGEIEEGPLGFDKQTGKSKGFALFVYK+PEGA++AL+DP+KTVEGRQL+CKLAIT
Sbjct: 181  AHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAKAALIDPMKTVEGRQLSCKLAIT 240

Query: 1105 DGKQGKRGAGAGPDAVQGH 1049
            DGKQGKR   +GPD+ Q H
Sbjct: 241  DGKQGKR---SGPDSGQAH 256



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 44/61 (72%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
 Frame = -2

Query: 670 LYRLPXXXXXXXXXG-YPESGHYSLSASSGYQNQHHHPPTGASPVPRVPPGSMYPNVPPY 494
           +YRLP         G YP+SGHY LSASSGYQNQ HHPP+GASPVPRVPP  MYPNVPPY
Sbjct: 380 MYRLPGSGGMPAGGGGYPDSGHYGLSASSGYQNQ-HHPPSGASPVPRVPP--MYPNVPPY 436

Query: 493 Y 491
           Y
Sbjct: 437 Y 437


>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
            gi|449483196|ref|XP_004156519.1| PREDICTED:
            uncharacterized protein LOC101231665 [Cucumis sativus]
          Length = 434

 Score =  370 bits (951), Expect = e-100
 Identities = 187/259 (72%), Positives = 215/259 (83%)
 Frame = -2

Query: 1822 MDPLKKRKLDENGFGGGEPDHLKLSPSDARKMIERFTPDQLLDILQDAVSHHSDVLAAVR 1643
            MD  KKR++DENG    E    +++P DARK+I+RFTPDQL+DILQDAVS H DVL AVR
Sbjct: 1    MDVTKKRRMDENGVDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVR 60

Query: 1642 SVADPDVSQRKLFIRGLGWDTTTDGLRSLFSAYGELEEAVVILDKATGKSKGYGFVTFRH 1463
            S+AD DVSQRKLFIRGL  DT+T+GLRSLFS+YGELEEAVVI+DKATGKSKGYGFVTF+H
Sbjct: 61   SIADRDVSQRKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKH 120

Query: 1462 VDGALLALREPSKRIDGRVTVTQLXXXXXXXXXXXXADIALRKIYVANVPPDLPADKLLA 1283
            VDGALLAL+EPSK IDGRVTVTQL            AD++LRKIYVANVP D+PADKLLA
Sbjct: 121  VDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKLLA 180

Query: 1282 HFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQSALLDPVKTVEGRQLNCKLAITD 1103
            HFSLYGEIEEGPLGFDKQTGK +G+ALFVYK PEGAQ+AL+DP+KT++GRQL+CK A  D
Sbjct: 181  HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFA-ND 239

Query: 1102 GKQGKRGAGAGPDAVQGHG 1046
            GK+GK G G   +  QG G
Sbjct: 240  GKKGKPGGGPDGNQTQGAG 258



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 39/60 (65%), Positives = 44/60 (73%)
 Frame = -2

Query: 670 LYRLPXXXXXXXXXGYPESGHYSLSASSGYQNQHHHPPTGASPVPRVPPGSMYPNVPPYY 491
           LYRLP         GYP+SGHYS+S++SG+ NQHH P  G SP PRVPPG MYPNVPPYY
Sbjct: 376 LYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQP-AGTSPAPRVPPGGMYPNVPPYY 434


>ref|XP_002300424.1| predicted protein [Populus trichocarpa] gi|222847682|gb|EEE85229.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  362 bits (929), Expect = 2e-97
 Identities = 189/273 (69%), Positives = 216/273 (79%), Gaps = 14/273 (5%)
 Frame = -2

Query: 1822 MDPLKKRKLDENGFGGGEPD---HLKLSPSDARKMIERFTPDQLLDILQDAVSHHSDVLA 1652
            MDP KKRKL+ENG      D     KL+P DARKM+ERFTPDQLLDILQ+AV  H D+L 
Sbjct: 1    MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILE 60

Query: 1651 AVRSVADPDVSQRKLFIRGLGWDTTTDGLRSLFSAYGELEEAVVILDKATGKSKGYGFVT 1472
            AVRS+ADPD +QRKLFIRGLGW+TTT+ LR+LFS YGELEEAVVILDK TGKSKGYGFV 
Sbjct: 61   AVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVI 120

Query: 1471 FRHVDGALLALREPSKRIDGRVTVTQL--------XXXXXXXXXXXXADIALRKIYVANV 1316
            ++HVDGALLAL+EPSK+IDGRVTVTQL                     D+A+RKIYVANV
Sbjct: 121  YKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANV 180

Query: 1315 PPDLPADKLLAHFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQSALLDPVKTVEG 1136
            P ++P+DKLL HF+ YGEIEEGPLGFDKQTGKSKGFALFVYKT EGAQ+ALL+PVK +EG
Sbjct: 181  PYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEG 240

Query: 1135 RQLNCKLAITDGKQGKR---GAGAGPDAVQGHG 1046
            RQLNCKLAI DGK+G++   G G G D +QG G
Sbjct: 241  RQLNCKLAI-DGKRGRQPGGGQGPGQDGLQGQG 272


>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|42572443|ref|NP_974317.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
            gi|8777484|dbj|BAA97064.1| unnamed protein product
            [Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
            putative RNA-binding protein [Arabidopsis thaliana]
            gi|20259621|gb|AAM14167.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
            AT3G15010 [Arabidopsis thaliana]
            gi|332642081|gb|AEE75602.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
            gi|332642082|gb|AEE75603.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 404

 Score =  348 bits (894), Expect = 2e-93
 Identities = 179/265 (67%), Positives = 206/265 (77%), Gaps = 5/265 (1%)
 Frame = -2

Query: 1822 MDPLKKRKLDENGFG-----GGEPDHLKLSPSDARKMIERFTPDQLLDILQDAVSHHSDV 1658
            MD +KKRKLDENG G     GG     +LSP DARK+IERFT DQLLD+LQ+A+  H DV
Sbjct: 1    MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 1657 LAAVRSVADPDVSQRKLFIRGLGWDTTTDGLRSLFSAYGELEEAVVILDKATGKSKGYGF 1478
            L +VR  AD D+SQRKLFIRGL  DTTT+GLRSLFS+YG+LEEA+VILDK TGKSKGYGF
Sbjct: 61   LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 1477 VTFRHVDGALLALREPSKRIDGRVTVTQLXXXXXXXXXXXXADIALRKIYVANVPPDLPA 1298
            VTF HVDGALLAL+EPSK+IDGRVTVTQL            ADI++RKIYVANVP D+PA
Sbjct: 121  VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 1297 DKLLAHFSLYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQSALLDPVKTVEGRQLNCK 1118
            D+LL HF  YG++EEGPLGFDK TGKS+GFALFVYKT EGAQ+AL DPVK ++G+ LNCK
Sbjct: 181  DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

Query: 1117 LAITDGKQGKRGAGAGPDAVQGHGN 1043
            LA+   K GK G     D   GHG+
Sbjct: 241  LAVDGKKGGKPGMPQAQDGGSGHGH 265



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 31/45 (68%), Positives = 33/45 (73%)
 Frame = -2

Query: 625 YPESGHYSLSASSGYQNQHHHPPTGASPVPRVPPGSMYPNVPPYY 491
           YPESGHY LS+S+GY  QHH    G SPVPRVP G MYPN PP Y
Sbjct: 361 YPESGHYGLSSSAGYPGQHHQA-VGTSPVPRVPHGGMYPNGPPNY 404