BLASTX nr result

ID: Glycyrrhiza24_contig00004338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004338
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|35550...   260   3e-67
ref|XP_003617953.1| F-box protein [Medicago truncatula] gi|35551...   255   1e-65
ref|XP_003637797.1| F-box protein [Medicago truncatula] gi|35550...   254   3e-65
ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...   249   9e-64
ref|XP_003588457.1| F-box protein [Medicago truncatula] gi|35547...   235   1e-59

>ref|XP_003637832.1| F-box protein [Medicago truncatula] gi|355503767|gb|AES84970.1|
           F-box protein [Medicago truncatula]
          Length = 392

 Score =  260 bits (665), Expect = 3e-67
 Identities = 136/282 (48%), Positives = 178/282 (63%), Gaps = 3/282 (1%)
 Frame = -2

Query: 963 VNGTLCLYQ-EDVRIVLWNPTTEKFKVIXXXXXXXXXXXXXXXXXXXXLKLHGFGYDHVR 787
           +N   CLYQ  +  ++LWNP TE++KV+                      +HGFGYDHVR
Sbjct: 118 INDNFCLYQGREPVVILWNPGTEEYKVLPPSPTESPVIYEEVYYY-----VHGFGYDHVR 172

Query: 786 DDYKVIRHISYVQNLTDYXXXXXXXXXXXXXL--WEIYSLRSNSWRKLDVNMPEGWPSLI 613
           DDYKVIR++ Y+    D+                WEIY+LRSNSWRKLD+++P      +
Sbjct: 173 DDYKVIRYVEYLDVRDDFEDDMEGEPISLLRDDMWEIYNLRSNSWRKLDLDLPRAHRGWV 232

Query: 612 GAHVYLNGACHWWGERETHNDELHLVSFDLSNEAFLTTPIPSEMDGSLDFRFVMRHLVVL 433
           G +VY+NG CHW+ +   H    +LVSFDLSNE + TTP+P  M+   D  F++R+L+VL
Sbjct: 233 GVYVYMNGVCHWYQDEFEHKG--YLVSFDLSNEVYCTTPLPLYMNDGFDSVFLLRYLMVL 290

Query: 432 NGSISLILTGAKTSTSFHISVLGELGVKESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNK 253
           N  I+LI    + +T FHIS+LGELGVKESWTKLFI+GPLPCI  HPIG G  GD+FF++
Sbjct: 291 NDHIALISNYVEMTT-FHISILGELGVKESWTKLFIIGPLPCI-EHPIGEGKNGDLFFSR 348

Query: 252 NGDELAWFDLRTQRIEELGIKGESWRCNVVVYKESLLPIGGI 127
              EL  ++L TQ I+ELG+KGE   C +V Y ES LPIG I
Sbjct: 349 KDGELVRYNLSTQVIDELGLKGEFSCCQIVNYMESSLPIGQI 390


>ref|XP_003617953.1| F-box protein [Medicago truncatula] gi|355519288|gb|AET00912.1|
           F-box protein [Medicago truncatula]
          Length = 404

 Score =  255 bits (652), Expect = 1e-65
 Identities = 147/280 (52%), Positives = 183/280 (65%), Gaps = 2/280 (0%)
 Frame = -2

Query: 957 GTLCLYQEDVRIVLWNPTTEKFKVIXXXXXXXXXXXXXXXXXXXXLKLHGFGYDHVRDDY 778
           G LC+ +E  RI LWN TT +FK                        LHGFGYD V+DDY
Sbjct: 137 GILCI-EELQRIALWNTTTGEFKATPPSPFAFESPCWDPMIC-----LHGFGYDQVKDDY 190

Query: 777 KVIRHISYVQNLTDYXXXXXXXXXXXXXLWEIYSLRSNSWRKLDVNMP-EGWPSLIGAHV 601
           KVIR+IS+    TD              LWEIY L+SNSWRKLD+NMP + +  ++   V
Sbjct: 191 KVIRYISFYPK-TDEDSDETWKDGYHSSLWEIYCLKSNSWRKLDINMPTQAYGGMV--QV 247

Query: 600 YLNGACHWWGERETHNDELHLVSFDLSNEAFLTTPIPSEMDGSLDFRFVMRHLVVLNGSI 421
           Y++G CHWWGE ET +DE++LVSFDL +E F+ T IP  M+  +D R V RHL VLNGSI
Sbjct: 248 YMDGVCHWWGECET-SDEVYLVSFDLYSEVFVKTFIPLNMN-DIDSRQVFRHLNVLNGSI 305

Query: 420 SLILTGAKTSTSFHISVLGELGVKESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNKNGDE 241
            LIL   + ST+FHIS+LGE+GVKESW KLFIVGPL C V HPIG G  GDI+  K  ++
Sbjct: 306 GLILNYVE-STTFHISILGEVGVKESWIKLFIVGPLTC-VEHPIGVGKNGDIYLKKKDNK 363

Query: 240 LAWFDLRTQRIEELGIKGESWR-CNVVVYKESLLPIGGIN 124
           L  F+L TQ+IEELG+KGE+ + C ++VY+ESLLPI  IN
Sbjct: 364 LVCFNLITQKIEELGVKGETGQSCQIIVYEESLLPIERIN 403


>ref|XP_003637797.1| F-box protein [Medicago truncatula] gi|355503732|gb|AES84935.1|
           F-box protein [Medicago truncatula]
          Length = 426

 Score =  254 bits (648), Expect = 3e-65
 Identities = 135/281 (48%), Positives = 171/281 (60%), Gaps = 17/281 (6%)
 Frame = -2

Query: 963 VNGTLCLYQEDVRIVLWNPTTEKFKVIXXXXXXXXXXXXXXXXXXXXLKLHGFGYDHVRD 784
           +NG +CLYQ    +VLWNPT  +FKV+                     +LHGFGYD V D
Sbjct: 118 INGIVCLYQSGTNVVLWNPTNGEFKVLPESPTELEPSVRYEIELE---RLHGFGYDSVSD 174

Query: 783 DYKVIRHISYVQNLTDYXXXXXXXXXXXXXL-----------------WEIYSLRSNSWR 655
           DYKVIRH+ Y  NL+DY                               WEIYSLRSNSWR
Sbjct: 175 DYKVIRHVQYELNLSDYENDDSDFEGDALSDYESDAVSLPTSMSRDDVWEIYSLRSNSWR 234

Query: 654 KLDVNMPEGWPSLIGAHVYLNGACHWWGERETHNDELHLVSFDLSNEAFLTTPIPSEMDG 475
           KLD++MP G  + +G +VYLNGACHWW + +  +++ +LVSFDLS E    TP+PS    
Sbjct: 235 KLDLDMPCGMRTSVGVYVYLNGACHWWDDDDDDDNDAYLVSFDLSKEVVCITPMPSTKIV 294

Query: 474 SLDFRFVMRHLVVLNGSISLILTGAKTSTSFHISVLGELGVKESWTKLFIVGPLPCIVHH 295
           + D    MRHL VLN  I+LI +  + S +FHIS+LGE+GVKESWTKLFI+  LP I HH
Sbjct: 295 NFDSGLEMRHLTVLNDHIALI-SYFELSATFHISILGEVGVKESWTKLFIL-TLPGI-HH 351

Query: 294 PIGAGMKGDIFFNKNGDELAWFDLRTQRIEELGIKGESWRC 172
           PIG G  GD+FF ++ ++L WF+LRTQ +EELGIKG+   C
Sbjct: 352 PIGEGRNGDLFFRRDDNKLVWFNLRTQMMEELGIKGQMHCC 392


>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score =  249 bits (635), Expect = 9e-64
 Identities = 140/281 (49%), Positives = 173/281 (61%)
 Frame = -2

Query: 963 VNGTLCLYQEDVRIVLWNPTTEKFKVIXXXXXXXXXXXXXXXXXXXXLKLHGFGYDHVRD 784
           +NGTLCL++    IVLWNPT  +FKVI                      LHGFGYD VRD
Sbjct: 118 INGTLCLHRYHRTIVLWNPTIGEFKVIPPSPIDSQLHDPTSVT------LHGFGYDSVRD 171

Query: 783 DYKVIRHISYVQNLTDYXXXXXXXXXXXXXLWEIYSLRSNSWRKLDVNMPEGWPSLIGAH 604
           DYKVIRH  + Q    +             +WE+YSLRS SWRKL+V+M        GA 
Sbjct: 172 DYKVIRHAEFHQR-NAFAGSLIVVPLERRQVWEMYSLRSESWRKLNVDMLPCNRRNAGAE 230

Query: 603 VYLNGACHWWGERETHNDELHLVSFDLSNEAFLTTPIPSEMDGSLDFRFVMRHLVVLNGS 424
           VY++G CHWWG      D   LVSF+LS+E  LTTPIP +MD S  F ++ RHL VLN S
Sbjct: 231 VYMDGVCHWWGYAY---DGPCLVSFNLSSEVILTTPIPLDMDES--FEWMERHLAVLNMS 285

Query: 423 ISLILTGAKTSTSFHISVLGELGVKESWTKLFIVGPLPCIVHHPIGAGMKGDIFFNKNGD 244
           I++I   A  +  FHISVLGELGVKESW KLF+VGPLPC VH P+G G KGDIFF K   
Sbjct: 286 IAIISHHANKNY-FHISVLGELGVKESWIKLFVVGPLPC-VHRPVGVGKKGDIFFIKEDS 343

Query: 243 ELAWFDLRTQRIEELGIKGESWRCNVVVYKESLLPIGGINN 121
           E+   +L    I+E+G+K + +RC +V+YK + LPIG +NN
Sbjct: 344 EVICLNLSNGMIKEIGVKEDLFRCQIVIYKPNFLPIGRLNN 384


>ref|XP_003588457.1| F-box protein [Medicago truncatula] gi|355477505|gb|AES58708.1|
           F-box protein [Medicago truncatula]
          Length = 423

 Score =  235 bits (600), Expect = 1e-59
 Identities = 130/273 (47%), Positives = 169/273 (61%), Gaps = 7/273 (2%)
 Frame = -2

Query: 963 VNGTLCLYQEDV--RIVLWNPTTEKFKVIXXXXXXXXXXXXXXXXXXXXLKLHGFGYDHV 790
           VNG +CLY + +  + V+WNP  E+ KVI                     +L+GFGYD+V
Sbjct: 117 VNGNICLYIDGISSKAVVWNPIIEELKVIPSEPSVPVPPYVRFAD-----QLYGFGYDYV 171

Query: 789 RDDYKVIRHISY---VQNLTDYXXXXXXXXXXXXXLWEIYSLRSNSWRKLDVNMPEGWPS 619
           RDDYK+IRH+ +   V NL D               WEIYS ++NSWRKLD+ M   + +
Sbjct: 172 RDDYKIIRHVGFHLDVYNLNDPRVILSLSDALYNPFWEIYSHKNNSWRKLDLAMTTFYHN 231

Query: 618 L--IGAHVYLNGACHWWGERETHNDELHLVSFDLSNEAFLTTPIPSEMDGSLDFRFVMRH 445
           L  +   V+ NG CHW G+ ET    ++LVSFDL NE F  TPIPS    +++F +V  H
Sbjct: 232 LLCVPKQVHTNGVCHWLGKTETDMHNIYLVSFDLGNEEFFLTPIPSTRKNNINFVWVNTH 291

Query: 444 LVVLNGSISLILTGAKTSTSFHISVLGELGVKESWTKLFIVGPLPCIVHHPIGAGMKGDI 265
           L VLN SI+LI + A+T T+FHIS+LGE+GVKESW KLFIVGPLP  V +PIG GM G+I
Sbjct: 292 LTVLNESIALISSEART-TTFHISILGEIGVKESWIKLFIVGPLP-FVGYPIGVGMNGEI 349

Query: 264 FFNKNGDELAWFDLRTQRIEELGIKGESWRCNV 166
           F +K  +ELA  D+ T  I++LGIKG S  C V
Sbjct: 350 FISKEDNELARCDISTHTIQDLGIKGVSCACQV 382


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