BLASTX nr result

ID: Glycyrrhiza24_contig00004329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004329
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36854.1| unknown [Medicago truncatula]                           71   1e-10
ref|XP_003628085.1| 80 kDa MCM3-associated protein [Medicago tru...    71   1e-10
ref|XP_003628079.1| hypothetical protein MTR_8g042200 [Medicago ...    67   2e-09
gb|AFK36673.1| unknown [Medicago truncatula]                           65   6e-09
ref|XP_003542788.1| PREDICTED: 80 kDa MCM3-associated protein-li...    57   2e-06

>gb|AFK36854.1| unknown [Medicago truncatula]
          Length = 403

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
 Frame = -3

Query: 256 MEGGNGNPRSSFSQPWRPRRHRFPSNAT----HQPKVSTFAQRVXXXXXXXXXXXXXXSD 89
           ME G+GNPRSSFSQ    RR +FP NA+    H+ KVSTF+QRV              SD
Sbjct: 1   MESGSGNPRSSFSQ---SRRQKFPLNASTATHHRSKVSTFSQRVTPPPTTGNNSNASTSD 57

Query: 88  FNNNQEDAQQGGSSNFGHLVGTCPYMCPE 2
           FN++         S+FG L+GTC YMCPE
Sbjct: 58  FNDD--------DSSFGVLLGTCSYMCPE 78


>ref|XP_003628085.1| 80 kDa MCM3-associated protein [Medicago truncatula]
           gi|355522107|gb|AET02561.1| 80 kDa MCM3-associated
           protein [Medicago truncatula]
          Length = 403

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/89 (48%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
 Frame = -3

Query: 256 MEGGNGNPRSSFSQPWRPRRHRFPSNAT----HQPKVSTFAQRVXXXXXXXXXXXXXXSD 89
           ME G+GNPRSSFSQ    RR +FP NA+    H+ KVSTF+QRV              SD
Sbjct: 1   MESGSGNPRSSFSQ---SRRQKFPLNASTATHHRSKVSTFSQRVTPPPTTGNNSNASTSD 57

Query: 88  FNNNQEDAQQGGSSNFGHLVGTCPYMCPE 2
           FN++         S+FG L+GTC YMCPE
Sbjct: 58  FNDD--------DSSFGVLLGTCSYMCPE 78


>ref|XP_003628079.1| hypothetical protein MTR_8g042200 [Medicago truncatula]
           gi|355522101|gb|AET02555.1| hypothetical protein
           MTR_8g042200 [Medicago truncatula]
          Length = 132

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/88 (46%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = -3

Query: 256 MEGGNGNPRSSFSQPWRPRRHRFPSNAT----HQPKVSTFAQRVXXXXXXXXXXXXXXSD 89
           ME G+GNPRSSF Q    RR +FP NA+    H+ KVSTF+QRV              SD
Sbjct: 1   MESGSGNPRSSFFQ---SRRQKFPLNASTATHHRSKVSTFSQRVTPPPTTGSNNNASTSD 57

Query: 88  FNNNQEDAQQGGSSNFGHLVGTCPYMCP 5
           FN++         S+FG L+GTC YMCP
Sbjct: 58  FNDD--------DSSFGVLLGTCSYMCP 77


>gb|AFK36673.1| unknown [Medicago truncatula]
          Length = 132

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
 Frame = -3

Query: 256 MEGGNGNPRSSFSQPWRPRRHRFPSNAT----HQPKVSTFAQRVXXXXXXXXXXXXXXSD 89
           ME G+GNPRSSF Q    RR +FP NA+    H+ KVSTF+QR               SD
Sbjct: 1   MESGSGNPRSSFFQ---SRRQKFPLNASTATHHRSKVSTFSQRATPPPTTGSNNNASTSD 57

Query: 88  FNNNQEDAQQGGSSNFGHLVGTCPYMCP 5
           FN++         S+FG L+GTC YMCP
Sbjct: 58  FNDD--------DSSFGVLLGTCSYMCP 77


>ref|XP_003542788.1| PREDICTED: 80 kDa MCM3-associated protein-like [Glycine max]
          Length = 405

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 43/89 (48%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = -3

Query: 256 MEGGNGNPRSSFSQP----WRPRRHRFPSNATHQPKVSTFAQRVXXXXXXXXXXXXXXSD 89
           MEGG GN  SSFSQ      R R  RFPSN   Q KVS+FA+R                 
Sbjct: 1   MEGGYGNRGSSFSQSRRGRGRGRGQRFPSN---QSKVSSFAERGTPSSSSANRASASVIS 57

Query: 88  FNNNQEDAQQGGSSNFGHLVGTCPYMCPE 2
            N  ++DAQ   SSNF   VGTCPYMCPE
Sbjct: 58  -NTLEDDAQP--SSNF---VGTCPYMCPE 80


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