BLASTX nr result

ID: Glycyrrhiza24_contig00004318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004318
         (1909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   440   e-121
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   370   e-100
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   370   e-100
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   359   2e-96
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   352   2e-94

>ref|XP_003537459.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 393

 Score =  440 bits (1132), Expect = e-121
 Identities = 251/406 (61%), Positives = 258/406 (63%), Gaps = 17/406 (4%)
 Frame = -3

Query: 1796 YWCYRCSRFVRVGRRGDTVVCPDCDGGFIEEIEQTAAARSVHVDARRRR--FPAAAMYMI 1623
            YWCYRCSRFVRV     TVVCPDCDGGFIEEIE     RSVH+D RR R  FPAAAMYMI
Sbjct: 10   YWCYRCSRFVRVWPH-HTVVCPDCDGGFIEEIEHPP--RSVHLDPRRHRHRFPAAAMYMI 66

Query: 1622 GQRPSPDQSSRPAA-LRRTRRNGGDRSPFNPVIVLXXXXXXXXXXXXXXXXXGFELFYDD 1446
            GQRPS D   RPA+ LRRTRRNGGDRSPFNPVIVL                  FELFYDD
Sbjct: 67   GQRPSSDP--RPASSLRRTRRNGGDRSPFNPVIVLRGGAEDESRG--------FELFYDD 116

Query: 1445 GAGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTISIDE 1266
            G GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTI ID+
Sbjct: 117  GTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDD 176

Query: 1265 VHLEMESHCAVCKEPFELGTSVREMPCKHIYHPECILPWLALHNSCPVCRHELPS-XXXX 1089
             HL MESHCAVCKE FE  T+VREMPCKHIYHPECILPWLALHNSCPVCRHELP+     
Sbjct: 177  THLAMESHCAVCKEAFETSTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADTPNP 236

Query: 1088 XXXXXXXXXXXXXXXXXAGLNSLNEEENNVGLTIWRLPXXXXXXXXXXXXXXXAERELPV 909
                              GLN    EE NVGLTIWRLP               A+RELPV
Sbjct: 237  NPNPNSNSNSNQNPSQNVGLN----EEENVGLTIWRLPGGGFAVGRFSGGRRGADRELPV 292

Query: 908  VYTEMDGGFNNGGGEPRRIXXXXXXXXXXXXXXXXXXXXRLFRNLFGCFRGGVG------ 747
            VYTEMDGGFNNGGGEPRRI                    R FRNLFGCFRGG        
Sbjct: 293  VYTEMDGGFNNGGGEPRRI-----SWSRGNRGRESGGLNRFFRNLFGCFRGGSSNTSSSG 347

Query: 746  -------XXXXXXXXXXXXXXXXXXXXXXXXXRTWSMDVNSGMRSW 630
                                            RTWSMDVNSGMR+W
Sbjct: 348  GASATQRSASSRESMRASSSRSSTMDLSPRSRRTWSMDVNSGMRAW 393


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score =  370 bits (950), Expect = e-100
 Identities = 210/396 (53%), Positives = 242/396 (61%), Gaps = 7/396 (1%)
 Frame = -3

Query: 1796 YWCYRCSRFVRVGRRGDTVVCPDCDGGFIEEIEQTAAARSVHVDAR-RRRFPAAAMYMIG 1620
            YWC+RCS FVRV  + D+VVCPDC+ GF+E+IE  +  R V+V+A  RRRFPAAAMYMIG
Sbjct: 7    YWCHRCSHFVRVSNQ-DSVVCPDCNSGFVEQIEHPS--RLVNVEAAPRRRFPAAAMYMIG 63

Query: 1619 QRPSPDQSSRPAALRRTRRNGGDRSPFNPVIVLXXXXXXXXXXXXXXXXXGFELFYDDGA 1440
             R +  Q+   + LRR+RRNGGDRSPFNPVIVL                  FEL+YDDG 
Sbjct: 64   NRSNSGQNLG-SGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRR----FELYYDDGG 118

Query: 1439 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTISIDEVH 1260
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIE+NGIGR+E+PPASKAAI+S+PTI I E +
Sbjct: 119  GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICENY 178

Query: 1259 LEMESHCAVCKEPFELGTSVREMPCKHIYHPECILPWLALHNSCPVCRHELPSXXXXXXX 1080
            L  ESHCAVCKE FELGT  REMPCKHIYH +CILPWL++ NSCPVCRHELPS       
Sbjct: 179  LATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPS------- 231

Query: 1079 XXXXXXXXXXXXXXAGLNSLNEEENNVGLTIWRLPXXXXXXXXXXXXXXXAERELPVVYT 900
                           G +  +  E NVGLTIWRLP                ERELPVVYT
Sbjct: 232  -DNQNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYT 290

Query: 899  EMDGGFNNGGGEPRRIXXXXXXXXXXXXXXXXXXXXRLFRNLFGCFRGGV------GXXX 738
            E+DGGF N GG PRR+                    ++ RN+F CF G +          
Sbjct: 291  EVDGGFTN-GGLPRRV-----SFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNST 344

Query: 737  XXXXXXXXXXXXXXXXXXXXXXRTWSMDVNSGMRSW 630
                                  RTWSM+VNSG  SW
Sbjct: 345  SDSGPSRSSRPLPHFNSEPRRRRTWSMEVNSGTISW 380


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score =  370 bits (950), Expect = e-100
 Identities = 210/396 (53%), Positives = 242/396 (61%), Gaps = 7/396 (1%)
 Frame = -3

Query: 1796 YWCYRCSRFVRVGRRGDTVVCPDCDGGFIEEIEQTAAARSVHVDAR-RRRFPAAAMYMIG 1620
            YWC+RCS FVRV  + D+VVCPDC+ GF+E+IE  +  R V+V+A  RRRFPAAAMYMIG
Sbjct: 10   YWCHRCSHFVRVSNQ-DSVVCPDCNSGFVEQIEHPS--RLVNVEAAPRRRFPAAAMYMIG 66

Query: 1619 QRPSPDQSSRPAALRRTRRNGGDRSPFNPVIVLXXXXXXXXXXXXXXXXXGFELFYDDGA 1440
             R +  Q+   + LRR+RRNGGDRSPFNPVIVL                  FEL+YDDG 
Sbjct: 67   NRSNSGQNLG-SGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRR----FELYYDDGG 121

Query: 1439 GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTISIDEVH 1260
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIE+NGIGR+E+PPASKAAI+S+PTI I E +
Sbjct: 122  GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICENY 181

Query: 1259 LEMESHCAVCKEPFELGTSVREMPCKHIYHPECILPWLALHNSCPVCRHELPSXXXXXXX 1080
            L  ESHCAVCKE FELGT  REMPCKHIYH +CILPWL++ NSCPVCRHELPS       
Sbjct: 182  LATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPS------- 234

Query: 1079 XXXXXXXXXXXXXXAGLNSLNEEENNVGLTIWRLPXXXXXXXXXXXXXXXAERELPVVYT 900
                           G +  +  E NVGLTIWRLP                ERELPVVYT
Sbjct: 235  -DNQNSLDAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYT 293

Query: 899  EMDGGFNNGGGEPRRIXXXXXXXXXXXXXXXXXXXXRLFRNLFGCFRGGV------GXXX 738
            E+DGGF N GG PRR+                    ++ RN+F CF G +          
Sbjct: 294  EVDGGFTN-GGLPRRV-----SFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNST 347

Query: 737  XXXXXXXXXXXXXXXXXXXXXXRTWSMDVNSGMRSW 630
                                  RTWSM+VNSG  SW
Sbjct: 348  SDSGPSRSSRPLPHFNSEPRRRRTWSMEVNSGTISW 383


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  359 bits (921), Expect = 2e-96
 Identities = 202/394 (51%), Positives = 230/394 (58%), Gaps = 5/394 (1%)
 Frame = -3

Query: 1796 YWCYRCSRFVRVGRRGDTVVCPDCDGGFIEEIEQTAAARSVHVDARRRRFPAAAMYMIGQ 1617
            YWCY C+RFVRV    D +VCPDCDGGF+EEIE+           R  RFPAAAMYMI  
Sbjct: 3    YWCYSCNRFVRVWSH-DAIVCPDCDGGFLEEIEEQPR--------RPHRFPAAAMYMIEN 53

Query: 1616 RPSPDQSSRPAALRRTRRNGGDRSPFNPVIVLXXXXXXXXXXXXXXXXXGFELFYDDGAG 1437
            RP+  Q+S  +A+RR RR  GDRSPFNPVIV+                  F+L+YDDG G
Sbjct: 54   RPNSAQNSH-SAVRRIRRGRGDRSPFNPVIVMRGTADEGGGEGGDRGA--FDLYYDDGGG 110

Query: 1436 SGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTISIDEVHL 1257
            SGLRPLP S+SEFLLGSGFDRLLEQLSQ+EINGIGRYE PPASKAAI+++PTI I + H+
Sbjct: 111  SGLRPLPASVSEFLLGSGFDRLLEQLSQMEINGIGRYEQPPASKAAIEAMPTIEIADAHV 170

Query: 1256 EMESHCAVCKEPFELGTSVREMPCKHIYHPECILPWLALHNSCPVCRHELPSXXXXXXXX 1077
              E HCAVCKEPFELG   REMPCKHIYH +CILPWL+L NSCPVCRHELPS        
Sbjct: 171  NTEHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEERNSPE- 229

Query: 1076 XXXXXXXXXXXXXAGLNSLNEEENNVGLTIWRLPXXXXXXXXXXXXXXXAERELPVVYTE 897
                            ++    E  VGLTIWRLP                ERELPVVYTE
Sbjct: 230  ----------------SNEQTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTE 273

Query: 896  MDGGFNNGGGEPRRIXXXXXXXXXXXXXXXXXXXXRLFRNLFGCFRGGVGXXXXXXXXXX 717
            MDGGFNNGG  PRRI                    R+FRNL  CF GG G          
Sbjct: 274  MDGGFNNGGA-PRRI----SWTSRTNRNQERGGLGRMFRNLLACF-GGHGSSSSSSSSES 327

Query: 716  XXXXXXXXXXXXXXXRT-----WSMDVNSGMRSW 630
                            +     W+++VNSG+R W
Sbjct: 328  GSRRRSSSSLLTLGSSSRNRRAWALEVNSGIRRW 361


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  352 bits (903), Expect = 2e-94
 Identities = 181/315 (57%), Positives = 206/315 (65%)
 Frame = -3

Query: 1796 YWCYRCSRFVRVGRRGDTVVCPDCDGGFIEEIEQTAAARSVHVDARRRRFPAAAMYMIGQ 1617
            YWC+RC+RFVRV  + D++VCP C+ GF+EEIE T  + + H     RRFPA AMYM+G 
Sbjct: 9    YWCHRCTRFVRVWAQ-DSIVCPYCESGFLEEIEATPRSENHH-----RRFPATAMYMLGN 62

Query: 1616 RPSPDQSSRPAALRRTRRNGGDRSPFNPVIVLXXXXXXXXXXXXXXXXXGFELFYDDGAG 1437
                 + S    LRR+RRN GDRSPFNPVIVL                  FEL+YDDGAG
Sbjct: 63   NRPDSEQSANLGLRRSRRNAGDRSPFNPVIVLRGPADGGGGEGGVVERSSFELYYDDGAG 122

Query: 1436 SGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTISIDEVHL 1257
            SGLRPLP +MSEFL+GSGFDRLLEQLSQIEING GR EHPPASKAA++S+PTI I   H+
Sbjct: 123  SGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHI 182

Query: 1256 EMESHCAVCKEPFELGTSVREMPCKHIYHPECILPWLALHNSCPVCRHELPSXXXXXXXX 1077
              E HCAVCKE F+LG+  REMPCKHIYH +CILPWL+L NSCPVCRHELP+        
Sbjct: 183  VTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPT-------- 234

Query: 1076 XXXXXXXXXXXXXAGLNSLNEEENNVGLTIWRLPXXXXXXXXXXXXXXXAERELPVVYTE 897
                           L+    EE  VGLTIWRLP                ERELPVVYTE
Sbjct: 235  DVPGTRNSPVSGNEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTE 294

Query: 896  MDGGFNNGGGEPRRI 852
            MDGGFNN G  PRRI
Sbjct: 295  MDGGFNNSGA-PRRI 308


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