BLASTX nr result

ID: Glycyrrhiza24_contig00004242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004242
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
gb|ABK95200.1| unknown [Populus trichocarpa]                          107   1e-21
ref|NP_001238306.1| uncharacterized protein LOC100306403 [Glycin...   105   5e-21
ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein...   105   7e-21
emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]   104   9e-21

>ref|XP_002320236.1| predicted protein [Populus trichocarpa] gi|222861009|gb|EEE98551.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/86 (68%), Positives = 66/86 (76%)
 Frame = -1

Query: 259 VDGKASRQSPASSPQCVXXXXXXXXLVQSHQNRALKTTSAHCRKIARSVIAMATGEAPAE 80
           +D KASRQS A+SPQCV         VQ  QNR  K T A+CRKIAR+V+ MATGEAPAE
Sbjct: 18  IDAKASRQSAAASPQCVSLPTLPPPPVQP-QNRPWKAT-AYCRKIARNVMTMATGEAPAE 75

Query: 79  VATTETPEFVKTIQEAWDKVEDKYAV 2
           VA+TE PE VKT+QEAWDKVEDKYAV
Sbjct: 76  VASTELPEIVKTVQEAWDKVEDKYAV 101


>gb|ABK95200.1| unknown [Populus trichocarpa]
          Length = 172

 Score =  107 bits (267), Expect = 1e-21
 Identities = 58/86 (67%), Positives = 65/86 (75%)
 Frame = -1

Query: 259 VDGKASRQSPASSPQCVXXXXXXXXLVQSHQNRALKTTSAHCRKIARSVIAMATGEAPAE 80
           +D KASRQS A+SPQCV         VQ  QN   K T A+CRKIAR+V+ MATGEAPAE
Sbjct: 18  IDAKASRQSAAASPQCVSLPTLPPPPVQP-QNGPWKAT-AYCRKIARNVMTMATGEAPAE 75

Query: 79  VATTETPEFVKTIQEAWDKVEDKYAV 2
           VA+TE PE VKT+QEAWDKVEDKYAV
Sbjct: 76  VASTELPEIVKTVQEAWDKVEDKYAV 101


>ref|NP_001238306.1| uncharacterized protein LOC100306403 [Glycine max]
           gi|255628427|gb|ACU14558.1| unknown [Glycine max]
          Length = 114

 Score =  105 bits (262), Expect = 5e-21
 Identities = 55/86 (63%), Positives = 63/86 (73%)
 Frame = -1

Query: 259 VDGKASRQSPASSPQCVXXXXXXXXLVQSHQNRALKTTSAHCRKIARSVIAMATGEAPAE 80
           +DGKA RQSPA+SPQCV             QNR+ KTT A+CRK+AR V+AMATGEAPAE
Sbjct: 17  LDGKAPRQSPAASPQCVSLPPPPLHS----QNRSWKTT-AYCRKVARKVMAMATGEAPAE 71

Query: 79  VATTETPEFVKTIQEAWDKVEDKYAV 2
              TE PE VKT+QE WDKV+DKYAV
Sbjct: 72  ATPTEVPEIVKTLQETWDKVDDKYAV 97


>ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
           [Vitis vinifera] gi|296089017|emb|CBI38720.3| unnamed
           protein product [Vitis vinifera]
          Length = 171

 Score =  105 bits (261), Expect = 7e-21
 Identities = 55/86 (63%), Positives = 61/86 (70%)
 Frame = -1

Query: 259 VDGKASRQSPASSPQCVXXXXXXXXLVQSHQNRALKTTSAHCRKIARSVIAMATGEAPAE 80
           +DGKA RQS A+S QCV         V S       TT  +CRKIAR+VIAMATGEAPAE
Sbjct: 17  IDGKAPRQSAAASSQCVTLPTLPPPPVPSQHRPGKGTT--YCRKIARNVIAMATGEAPAE 74

Query: 79  VATTETPEFVKTIQEAWDKVEDKYAV 2
           V TTE PE +KT+QEAWDKVEDKYAV
Sbjct: 75  VGTTEVPEIIKTVQEAWDKVEDKYAV 100


>emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]
          Length = 171

 Score =  104 bits (260), Expect = 9e-21
 Identities = 55/86 (63%), Positives = 61/86 (70%)
 Frame = -1

Query: 259 VDGKASRQSPASSPQCVXXXXXXXXLVQSHQNRALKTTSAHCRKIARSVIAMATGEAPAE 80
           +DGKA RQS A+S QCV         V S       TT  +CRKIAR+VIAMATGEAPAE
Sbjct: 17  IDGKAPRQSAAASSQCVTLPTLPPPPVPSQXRPGKGTT--YCRKIARNVIAMATGEAPAE 74

Query: 79  VATTETPEFVKTIQEAWDKVEDKYAV 2
           V TTE PE +KT+QEAWDKVEDKYAV
Sbjct: 75  VGTTEVPEIIKTVQEAWDKVEDKYAV 100


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