BLASTX nr result

ID: Glycyrrhiza24_contig00004188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004188
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   161   4e-38
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   159   2e-37
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   114   1e-23
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              114   1e-23
emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]   102   3e-20

>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  161 bits (408), Expect = 4e-38
 Identities = 88/120 (73%), Positives = 96/120 (80%)
 Frame = -1

Query: 361  LSVMLTKLSKDTSSSIPVFLQALFXXXXXXXXXXXXVISLISYFRDPAIQFGAVRFISTL 182
            LSVMLTKLSKDTSS+ PVFLQALF            V+SLISY +DPAIQFGAVRFIS L
Sbjct: 838  LSVMLTKLSKDTSSNFPVFLQALFSCTTKPVPVVTSVMSLISYSQDPAIQFGAVRFISML 897

Query: 181  FATADLVQPFSYETTCFAPDDQEIINLRHSVSYILQETSESNEDLFVATVNLLTSAAHYQ 2
            FA AD +QPFSY  TCF PD+ EI++LRHSV+YIL E SESNEDLFVATVNL TSAAHYQ
Sbjct: 898  FAIADCIQPFSYGITCFIPDN-EIMDLRHSVNYILLEQSESNEDLFVATVNLFTSAAHYQ 956


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score =  159 bits (403), Expect = 2e-37
 Identities = 89/123 (72%), Positives = 94/123 (76%), Gaps = 3/123 (2%)
 Frame = -1

Query: 361  LSVMLTKLSKDTSSSIPVFLQALFXXXXXXXXXXXXVISLISYFRDPAIQFGAVRFISTL 182
            LS M TKLSKDTSSSIPVFLQA+F             ISLISYF+DP IQ GAVRFISTL
Sbjct: 834  LSEMTTKLSKDTSSSIPVFLQAVFSCTTKPVSVVTSAISLISYFQDPVIQLGAVRFISTL 893

Query: 181  FATADLVQPFSYETTCFAPDDQE---IINLRHSVSYILQETSESNEDLFVATVNLLTSAA 11
            F T D VQ FS ETT FAPD+QE   IINLRHS+SYIL+E SE NEDL VATVNLLTSAA
Sbjct: 894  FTTTDCVQSFSCETTYFAPDNQEVWDIINLRHSMSYILKEKSELNEDLLVATVNLLTSAA 953

Query: 10   HYQ 2
            HYQ
Sbjct: 954  HYQ 956


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  114 bits (284), Expect = 1e-23
 Identities = 64/120 (53%), Positives = 78/120 (65%)
 Frame = -1

Query: 361  LSVMLTKLSKDTSSSIPVFLQALFXXXXXXXXXXXXVISLISYFRDPAIQFGAVRFISTL 182
            L  ML+KLSKD +SS+PVF QA+             VISLISYF +P IQ GA R +S L
Sbjct: 852  LFTMLSKLSKDITSSLPVFDQAVLSTTTKPISVIAAVISLISYFHNPRIQVGASRVLSML 911

Query: 181  FATADLVQPFSYETTCFAPDDQEIINLRHSVSYILQETSESNEDLFVATVNLLTSAAHYQ 2
            F  AD  QP+ +   CF  DD++I +LRHS+  IL + S  NEDLFVATV LLTSAA +Q
Sbjct: 912  FIIADSSQPYLFGNRCFGLDDKQITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQ 971


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  114 bits (284), Expect = 1e-23
 Identities = 64/120 (53%), Positives = 78/120 (65%)
 Frame = -1

Query: 361  LSVMLTKLSKDTSSSIPVFLQALFXXXXXXXXXXXXVISLISYFRDPAIQFGAVRFISTL 182
            L  ML+KLSKD +SS+PVF QA+             VISLISYF +P IQ GA R +S L
Sbjct: 875  LFTMLSKLSKDITSSLPVFDQAVLSTTTKPISVIAAVISLISYFHNPRIQVGASRVLSML 934

Query: 181  FATADLVQPFSYETTCFAPDDQEIINLRHSVSYILQETSESNEDLFVATVNLLTSAAHYQ 2
            F  AD  QP+ +   CF  DD++I +LRHS+  IL + S  NEDLFVATV LLTSAA +Q
Sbjct: 935  FIIADSSQPYLFGNRCFGLDDKQITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQ 994


>emb|CAN77165.1| hypothetical protein VITISV_029834 [Vitis vinifera]
          Length = 1391

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/110 (51%), Positives = 70/110 (63%)
 Frame = -1

Query: 331 DTSSSIPVFLQALFXXXXXXXXXXXXVISLISYFRDPAIQFGAVRFISTLFATADLVQPF 152
           D +SS+PVF QA+             VISLISYF +P IQ GA R +S LF  AD  QP+
Sbjct: 241 DITSSLPVFDQAVLSTTTKPISVIAAVISLISYFHNPRIQVGASRVLSMLFIIADSSQPY 300

Query: 151 SYETTCFAPDDQEIINLRHSVSYILQETSESNEDLFVATVNLLTSAAHYQ 2
            +   CF  DD++I +LRHS+  IL + S  NEDLFVATV LLTSAA +Q
Sbjct: 301 LFGNRCFGLDDKQITDLRHSIDKILSDQSSWNEDLFVATVKLLTSAALHQ 350


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