BLASTX nr result

ID: Glycyrrhiza24_contig00004179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004179
         (1898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi...   418   e-114
ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi...   385   e-104
ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   380   e-103
ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   374   e-101
ref|XP_003547238.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   353   9e-95

>ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi|87241270|gb|ABD33128.1|
            Zinc finger, RING-type; Thioredoxin-related [Medicago
            truncatula] gi|355486438|gb|AES67641.1| RING finger
            protein [Medicago truncatula] gi|388498558|gb|AFK37345.1|
            unknown [Medicago truncatula]
          Length = 355

 Score =  418 bits (1075), Expect = e-114
 Identities = 221/335 (65%), Positives = 240/335 (71%), Gaps = 13/335 (3%)
 Frame = -3

Query: 1698 MNSDT--PPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPAVSLFADGLQ 1525
            MNS+T  P ST SFWCYSCTRF+H+L+ ++VVCPHCQ+GFVEEIHAGQSPAVSLFADG+Q
Sbjct: 1    MNSETETPSSTTSFWCYSCTRFIHILNQNNVVCPHCQNGFVEEIHAGQSPAVSLFADGIQ 60

Query: 1524 XXXXXXXXXXXXXXXXXS-PFNPVIVLRGPGEDGVAG----------DGEGSGFELYYDD 1378
                               PFNPVIVLRGP ED  AG          +G  S FELYY+D
Sbjct: 61   SSRRQTSRRRRRNAGGSRSPFNPVIVLRGPREDTTAGVGADAGGGDSEGNTSSFELYYED 120

Query: 1377 GDGTGLRPLPPTMSEFLLGSGFDRLLEQFSQIEINGFGRVENPPASKAAIESMXXXXXXX 1198
             +GT LRPLPP+MSE LLGSGFDRLLEQFSQIEINGFGR ENPPASKAAIES+       
Sbjct: 121  SNGTDLRPLPPSMSELLLGSGFDRLLEQFSQIEINGFGRSENPPASKAAIESIPTVEITD 180

Query: 1197 XXXXXXTHCAVCKEAFELGSEAREMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQNTP 1018
                   HCAVCKE FELGSEAR+MPC HLYHSDCILPWLSMRNSCPVCRHELPSDQN  
Sbjct: 181  SEMESEIHCAVCKEQFELGSEARKMPCNHLYHSDCILPWLSMRNSCPVCRHELPSDQNAS 240

Query: 1017 ETRIAGQIDEEAVGLTIWRLPXXXXXXXXXXXXXXXGESQLPVVYTEMDXXXXXXXXXXX 838
            E+RI+GQIDEEAVGLTIWRLP               GE QLP+VYTEMD           
Sbjct: 241  ESRISGQIDEEAVGLTIWRLPGGGFAVGRFAGGRRAGEIQLPIVYTEMD-----GNNSNE 295

Query: 837  XSRRITLAVGGNSNRVRESRGFRRIFRNFLSFFGS 733
             SRRI+L VG  SNRVRE RG RRIFRNFLSFFG+
Sbjct: 296  DSRRISLTVG--SNRVRERRGIRRIFRNFLSFFGN 328


>ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi|355507760|gb|AES88902.1|
            RING finger protein [Medicago truncatula]
          Length = 369

 Score =  385 bits (988), Expect = e-104
 Identities = 201/327 (61%), Positives = 227/327 (69%), Gaps = 6/327 (1%)
 Frame = -3

Query: 1698 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSP--AVSLFADGLQ 1525
            MNS++ P T S+WCYSCTRF++L DH  +VCPHC +GFVEEI AG+SP   +S F     
Sbjct: 1    MNSESSPETPSYWCYSCTRFINLSDHTLIVCPHCDNGFVEEIAAGESPHHRLSPFPADTV 60

Query: 1524 XXXXXXXXXXXXXXXXXSPFNPVIVLRGPGEDGVAGDGEGSG---FELYYDDGDGTGLRP 1354
                             SPFNPVIVLRG G+DGV  DG G+G   FEL+YDDGDG+GLRP
Sbjct: 61   SSRRQGFRRRRRDAGSRSPFNPVIVLRGAGDDGVGEDGAGAGGSAFELFYDDGDGSGLRP 120

Query: 1353 LPPTMSEFLLGSGFDRLLEQFSQIEINGFGRVENPPASKAAIESMXXXXXXXXXXXXXTH 1174
            LPPT+SEFLLGSGFDRLLEQFSQIE+NGFGR ENPPASKAAIESM              H
Sbjct: 121  LPPTVSEFLLGSGFDRLLEQFSQIEMNGFGRPENPPASKAAIESMPTVEICEEHVSCELH 180

Query: 1173 CAVCKEAFELGSEAREMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQNTP-ETRIAGQ 997
            CAVCKE FEL +EARE+PCKHLYHSDCILPWL++RNSCPVCRHELPSD N P ETR++GQ
Sbjct: 181  CAVCKEEFELHAEARELPCKHLYHSDCILPWLTVRNSCPVCRHELPSDLNNPLETRVSGQ 240

Query: 996  IDEEAVGLTIWRLPXXXXXXXXXXXXXXXGESQLPVVYTEMDXXXXXXXXXXXXSRRITL 817
            IDEEA+GLTIWRLP               GES  PVVYTEMD             RRI+ 
Sbjct: 241  IDEEAIGLTIWRLPGGGFAVGRFSGGRSAGESHFPVVYTEMD--GGLNAAQGSAPRRISR 298

Query: 816  AVGGNSNRVRESRGFRRIFRNFLSFFG 736
             V   ++RVRES G  R+FRNF SFFG
Sbjct: 299  TV--RAHRVRESHGIGRVFRNFFSFFG 323


>ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  380 bits (975), Expect = e-103
 Identities = 203/327 (62%), Positives = 222/327 (67%), Gaps = 6/327 (1%)
 Frame = -3

Query: 1698 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPA----VSLFADG 1531
            MN DT P T S+WCYSCTRFVHL     + CPHCQSGFVEEI AG   +    +S F D 
Sbjct: 1    MNLDTQPGTPSYWCYSCTRFVHLSVQATIACPHCQSGFVEEIRAGAEASPRHRLSPFPDD 60

Query: 1530 -LQXXXXXXXXXXXXXXXXXSPFNPVIVLRGPGEDGVAGDGEG-SGFELYYDDGDGTGLR 1357
             L                  SPFNPVIVLRGPG+D  A D +G S FEL+YDDGDGTGLR
Sbjct: 61   PLSFRRQGFRRRRREGAGNRSPFNPVIVLRGPGDDSAAADHDGASTFELFYDDGDGTGLR 120

Query: 1356 PLPPTMSEFLLGSGFDRLLEQFSQIEINGFGRVENPPASKAAIESMXXXXXXXXXXXXXT 1177
            PLPPTMSEFLLGSGFDRLLEQF+Q+E+NGFGR ENPP SKAAIESM              
Sbjct: 121  PLPPTMSEFLLGSGFDRLLEQFAQMEMNGFGRPENPPTSKAAIESMPTVEIGETHVETDA 180

Query: 1176 HCAVCKEAFELGSEAREMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQNTPETRIAGQ 997
            HCAVCKE FEL +EARE+PCKH+YHS+CILPWLSMRNSCPVCRHELPSD    ETR+  Q
Sbjct: 181  HCAVCKEVFELHAEARELPCKHIYHSECILPWLSMRNSCPVCRHELPSDL---ETRVPSQ 237

Query: 996  IDEEAVGLTIWRLPXXXXXXXXXXXXXXXGESQLPVVYTEMDXXXXXXXXXXXXSRRITL 817
            IDEEA+GLTIWRLP               GES LPVVYTEMD             RRI+ 
Sbjct: 238  IDEEAIGLTIWRLPGGGFAVGRFSGGRRTGESHLPVVYTEMD---GGLNTNGGAPRRISR 294

Query: 816  AVGGNSNRVRESRGFRRIFRNFLSFFG 736
            +V   SNRVRESRGF R+FRNF SFFG
Sbjct: 295  SV--RSNRVRESRGFGRVFRNFFSFFG 319


>ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  374 bits (961), Expect = e-101
 Identities = 201/329 (61%), Positives = 217/329 (65%), Gaps = 8/329 (2%)
 Frame = -3

Query: 1698 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPAVS-------LF 1540
            MN +T P TAS+WCYSCTRFVHL     + CPHCQSGFVEEI AG     S         
Sbjct: 1    MNLETQPGTASYWCYSCTRFVHLSVQSTIACPHCQSGFVEEIRAGAGAEASPRHRLSPFP 60

Query: 1539 ADGLQXXXXXXXXXXXXXXXXXSPFNPVIVLRGPGEDGVAGDGEG-SGFELYYDDGDGTG 1363
             D L                  SPFNPVIVLRGPG+D  A D +G S FEL+YDDGDGTG
Sbjct: 61   DDPLLLRRQGFRRRRREASGNRSPFNPVIVLRGPGDDSAAADHDGVSTFELFYDDGDGTG 120

Query: 1362 LRPLPPTMSEFLLGSGFDRLLEQFSQIEINGFGRVENPPASKAAIESMXXXXXXXXXXXX 1183
            LRPLPPTMSE LLGSGFDRLLEQF+QIE+NGFGR ENPPASKAAIESM            
Sbjct: 121  LRPLPPTMSELLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGETHVET 180

Query: 1182 XTHCAVCKEAFELGSEAREMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQNTPETRIA 1003
              HCAVCKEAFEL +EARE+PCKH+YHSDCILPWLSMRNSCPVCRHELPSD    ETR+ 
Sbjct: 181  EAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHELPSDL---ETRVP 237

Query: 1002 GQIDEEAVGLTIWRLPXXXXXXXXXXXXXXXGESQLPVVYTEMDXXXXXXXXXXXXSRRI 823
             QIDEE +GLTIWRLP               GES  PVVYTEMD             RRI
Sbjct: 238  SQIDEETIGLTIWRLPGGGFAVGRFSGGRRTGESHFPVVYTEMD---GGLNTNGGAPRRI 294

Query: 822  TLAVGGNSNRVRESRGFRRIFRNFLSFFG 736
            + +V   SNRVRESRGF R+  NF SFFG
Sbjct: 295  SRSV--RSNRVRESRGFGRVISNFFSFFG 321


>ref|XP_003547238.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 314

 Score =  353 bits (906), Expect = 9e-95
 Identities = 202/323 (62%), Positives = 213/323 (65%), Gaps = 1/323 (0%)
 Frame = -3

Query: 1698 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPAVSLFADGLQXX 1519
            MNSDT     S+WCYSCTRFVH+ D +DVVCP C  GFVE++ AGQS             
Sbjct: 1    MNSDT----TSYWCYSCTRFVHIHDQNDVVCPRCHGGFVEKVTAGQSARQGF-------- 48

Query: 1518 XXXXXXXXXXXXXXXSPFNPVIVLRGPGEDGVAGDGEGSGFELYYDDGDGTGLRPLPPTM 1339
                           SPFNPVIVLRGPGED      E S FELYYD  DG GLRPLP TM
Sbjct: 49   -----RRRRRNAGSHSPFNPVIVLRGPGED------EESSFELYYDGFDGEGLRPLPSTM 97

Query: 1338 SEFLLGSGFDRLLEQFSQIEINGFGRVENPPASKAAIESMXXXXXXXXXXXXXTHCAVCK 1159
            SEFLLGSGFDRLLEQ SQIEING GR ENPPASKAAIESM             T CAVCK
Sbjct: 98   SEFLLGSGFDRLLEQVSQIEINGLGRPENPPASKAAIESMPTLEITESHVASETTCAVCK 157

Query: 1158 EAFELGSEAREMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQNTPETRIAGQIDEEAV 979
            EAFELG  AREMPCKHLYHSDCILPWLSMRNSCPVCRHELPS+Q  PETR+AGQI+EEAV
Sbjct: 158  EAFELGELAREMPCKHLYHSDCILPWLSMRNSCPVCRHELPSEQAAPETRVAGQIEEEAV 217

Query: 978  GLTIWRLPXXXXXXXXXXXXXXXGESQLPVVYTEMDXXXXXXXXXXXXSRRITLAVGGNS 799
            GLTIWRLP               GES LPVVYTEM+            SRRI+LAVGG  
Sbjct: 218  GLTIWRLP-----GGGFAVGRFAGESPLPVVYTEME----SGGNSNEGSRRISLAVGG-- 266

Query: 798  NRVRESR-GFRRIFRNFLSFFGS 733
             RVRESR GF RIFRN     G+
Sbjct: 267  GRVRESRGGFGRIFRNLFGRIGA 289


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