BLASTX nr result

ID: Glycyrrhiza24_contig00004151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004151
         (2167 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   770   0.0  
ref|XP_003637181.1| DEAD-box ATP-dependent RNA helicase [Medicag...   749   0.0  
ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   732   0.0  
ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|2...   729   0.0  
ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   728   0.0  

>ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine max]
          Length = 636

 Score =  770 bits (1989), Expect = 0.0
 Identities = 431/611 (70%), Positives = 462/611 (75%), Gaps = 2/611 (0%)
 Frame = -2

Query: 1932 KRFPFSNPTTVLPPRLFRPLCSSXXXXXXXXXXXXXXXXXXEVIKHSMLLERLRVRHLKK 1753
            KR P   P  +   R FRPLCS                      KHS+LLERLR RHL+ 
Sbjct: 48   KRVPLPKPLPLF--RRFRPLCSVSAAAPEAADA-----------KHSILLERLRSRHLR- 93

Query: 1752 DNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFEELGIGGEVMGAVREMG 1573
                A K  P                               SFEELG+  EVMGAVREMG
Sbjct: 94   ---DAAKAAPEPRKKEKVAAAAAAAAAAAEAKEKKKAVA--SFEELGLSEEVMGAVREMG 148

Query: 1572 IEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQSNGILLKPRRPR 1393
            IEVPTEIQ IG+PAVL+ KSVVLGSHTGSGKTLAYLLPL QLLRRDEQ NGILLKPRRPR
Sbjct: 149  IEVPTEIQSIGIPAVLEEKSVVLGSHTGSGKTLAYLLPLAQLLRRDEQLNGILLKPRRPR 208

Query: 1392 AVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRIL 1213
            AVVLCPTREL+EQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPID+VVGTPGR+L
Sbjct: 209  AVVLCPTRELSEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDVVVGTPGRVL 268

Query: 1212 QHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRRASKPDGLGFQTILVTAT 1033
            QHIEEGN+VYGDIKYLVLDEADTMFDRGFGPDIRKF+GPLK RASKPDGLGFQTILVTAT
Sbjct: 269  QHIEEGNMVYGDIKYLVLDEADTMFDRGFGPDIRKFIGPLKNRASKPDGLGFQTILVTAT 328

Query: 1032 MTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSENKLEALLQVLEPSLAKGN 853
            MTK VQ L+DEEF GI HLRTSTLHKKISSARHDFIKL+GSENKLEALLQVLEPSLAKGN
Sbjct: 329  MTKAVQNLIDEEFLGIVHLRTSTLHKKISSARHDFIKLAGSENKLEALLQVLEPSLAKGN 388

Query: 852  RVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLRKFKSDDEDCPTLVCTDL 673
            RVMVFCNTL SSRAVDHFLGENQIS VNYHGEVPAEQRVENLRKFKSD +DCPTLVCTDL
Sbjct: 389  RVMVFCNTLDSSRAVDHFLGENQISAVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDL 448

Query: 672  AARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKRDLNLATKIEEAMR 493
            AARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAK+DL+LA+KIE+A+R
Sbjct: 449  AARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLDLASKIEDALR 508

Query: 492  KNESLEAITKESVRSDI--TRNQITEQRRKNKNLVTIXXXXXXXXXXXXXXXXXXXXXXX 319
            KNESLEAITKESVR DI  T+NQ TE + K+K LV +                       
Sbjct: 509  KNESLEAITKESVRRDIARTQNQSTE-KGKSKRLVKVSKVMGKSGSRFGSGNNGSGMKSG 567

Query: 318  KQSPPVKPTTRKGITXXXXXXXXXXXXXXXXXXSENKQTGKRGSVTTKSTNSKLSVVGFR 139
            K S PVK + +KGI                   +E +Q+ K  S  TKSTNSKL+VVGFR
Sbjct: 568  KGS-PVK-SMKKGI-QVSKSGKSSSANSLRKASTEKRQSSKMVS-ATKSTNSKLNVVGFR 623

Query: 138  GRNSPPNKKQS 106
            G+NS  N K+S
Sbjct: 624  GKNSSSNNKES 634


>ref|XP_003637181.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355503116|gb|AES84319.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 684

 Score =  749 bits (1933), Expect = 0.0
 Identities = 379/469 (80%), Positives = 414/469 (88%)
 Frame = -2

Query: 1800 KHSMLLERLRVRHLKKDNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFE 1621
            KHS LLE+LR+RHLK  + +  +                                 GSFE
Sbjct: 63   KHSFLLEKLRIRHLKGGSRNDERVV----------RKVEGVKKKKEGVDEEDGGGVGSFE 112

Query: 1620 ELGIGGEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLR 1441
             LG+G EVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLR
Sbjct: 113  GLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLR 172

Query: 1440 RDEQSNGILLKPRRPRAVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDS 1261
            RDEQ NG++LKP+RPRAVVLCPTREL+EQVFRVAK+ISHHARFRCTMVSGGGRLRPQE+S
Sbjct: 173  RDEQMNGLVLKPKRPRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEES 232

Query: 1260 LNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRRA 1081
            L+NPIDMVVGTPGRILQHIEEGN+VYGDI+Y+VLDEADTMFDRGFGPDI+KFL PLK RA
Sbjct: 233  LSNPIDMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHRA 292

Query: 1080 SKPDGLGFQTILVTATMTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSENK 901
            SKPD LGFQT+LVTATMTK VQ LVDEEFQGI HLRTS+LHKKIS+ARHDFIKLSG+ENK
Sbjct: 293  SKPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDFIKLSGTENK 352

Query: 900  LEALLQVLEPSLAKGNRVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLRK 721
            L++LLQVLEPSLAKGNRVMVFCNTL SSRAVDHFL ENQISTVNYHGEVPA QRVENL K
Sbjct: 353  LDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNK 412

Query: 720  FKSDDEDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLV 541
            FKS+++DCPTLVCTDLAARGLDLDVDHV+MFDFPLNSIDYLHRTGRTARMGAKGK+TSLV
Sbjct: 413  FKSNNDDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLV 472

Query: 540  AKRDLNLATKIEEAMRKNESLEAITKESVRSDITRNQITEQRRKNKNLV 394
             K+D +LATKIEEA++KNE+LEAITKESVR D+TRNQITEQRRKNKN+V
Sbjct: 473  TKKDYSLATKIEEAIKKNENLEAITKESVRMDVTRNQITEQRRKNKNVV 521


>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
          Length = 635

 Score =  732 bits (1890), Expect = 0.0
 Identities = 391/570 (68%), Positives = 431/570 (75%), Gaps = 11/570 (1%)
 Frame = -2

Query: 1803 IKHSMLLERLRVRHLKKDNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSF 1624
            ++HS+LLE+LR RHLK    S    +P                               SF
Sbjct: 69   MRHSILLEKLRFRHLKDSAKSPQTRSPPLSTGGKEGEPGSMKSQKKPKMVS-------SF 121

Query: 1623 EELGIGGEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLL 1444
            EELG+  EVM AVRE GI VPTEIQCIGVPAVL+G+SVVLGSHTGSGKTLAY+LPLVQLL
Sbjct: 122  EELGLSEEVMAAVRETGISVPTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLL 181

Query: 1443 RRDEQSNGILLKPRRPRAVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQED 1264
            RRDE  +G+L+KPRRPRAVVLCPTREL+EQVFRVAKSISHHARFR TMVSGGGRLRPQED
Sbjct: 182  RRDEALSGVLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQED 241

Query: 1263 SLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRR 1084
            SLN PIDMVVGTPGR+LQHIEEGN+VYG+IKYLVLDEADTMFDRGFGPDIRKFL PLK R
Sbjct: 242  SLNIPIDMVVGTPGRVLQHIEEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNR 301

Query: 1083 ASKPDGLGFQTILVTATMTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSEN 904
            ASK D  GFQT+LVTATMTK VQKL+DEEFQGI HLRTSTLHKKI+SARHDFIKLSGSEN
Sbjct: 302  ASKSDDQGFQTVLVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSEN 361

Query: 903  KLEALLQVLEPSLAKGNRVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLR 724
            KLEALLQVLEPSLAKGN+VMVFCNTL SSRAVDHFLGENQI TVNYHGEVPAEQRVENL+
Sbjct: 362  KLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLK 421

Query: 723  KFKSDDEDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 544
            KFK++D DCPTLVCTDLAARGLDLDVDHV+MFDFPLNSIDYLHRTGRTARMGAKGKVTSL
Sbjct: 422  KFKTEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 481

Query: 543  VAKRDLNLATKIEEAMRKNESLEAITKESVRSDITRNQITEQRRKNKNLVTIXXXXXXXX 364
            VAK+DL LAT+IEEA+RKNESLEA+T +++R D+ R +I+EQ+ KN NLV +        
Sbjct: 482  VAKKDLLLATRIEEAIRKNESLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKTK 541

Query: 363  XXXXXXXXXXXXXXXKQ-----------SPPVKPTTRKGITXXXXXXXXXXXXXXXXXXS 217
                                        SPP K      I                    
Sbjct: 542  VESMKSSSKAASTQTSGRKTLGGKSGKVSPPTKSKKTVKILKPSKSSSAGGGSKRALSGV 601

Query: 216  ENKQTGKRGSVTTKSTNSKLSVVGFRGRNS 127
              +   KR S + KS+ SKLSVVGFRGR+S
Sbjct: 602  MKRADSKRSS-SVKSSTSKLSVVGFRGRSS 630


>ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|222856972|gb|EEE94519.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  729 bits (1881), Expect = 0.0
 Identities = 377/506 (74%), Positives = 410/506 (81%)
 Frame = -2

Query: 1911 PTTVLPPRLFRPLCSSXXXXXXXXXXXXXXXXXXEVIKHSMLLERLRVRHLKKDNNSATK 1732
            P+ VL    FRPLC+                     +KHS+LLERLR+RHLK        
Sbjct: 32   PSRVLLGFNFRPLCTLSSTTAATERDE---------VKHSILLERLRLRHLKGSKKPQLT 82

Query: 1731 TTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSFEELGIGGEVMGAVREMGIEVPTEI 1552
             T                               GSFEELG+  EVMGAV+EMGIEVPTEI
Sbjct: 83   DTQTQTALKPVVLIEGEEEEDGFKKSKKGKKIAGSFEELGLSEEVMGAVKEMGIEVPTEI 142

Query: 1551 QCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQSNGILLKPRRPRAVVLCPT 1372
            QCIG+PA+LD ++VVLGSHTGSGKTLAY+LPLVQLLRRDE   G L+KPRRPRAVVLCPT
Sbjct: 143  QCIGIPAILDSRTVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGRLMKPRRPRAVVLCPT 202

Query: 1371 RELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRILQHIEEGN 1192
            REL+EQVFRVAKSI HHARFR TMVSGGGR+RPQEDSLNNPIDMVVGTPGR+LQHI++GN
Sbjct: 203  RELSEQVFRVAKSIGHHARFRSTMVSGGGRMRPQEDSLNNPIDMVVGTPGRVLQHIQDGN 262

Query: 1191 LVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRRASKPDGLGFQTILVTATMTKPVQK 1012
            +VYGDIKYLVLDEADTMFDRGFGPDI KFLGPLK R SK DG GFQTILVTATMTK VQK
Sbjct: 263  MVYGDIKYLVLDEADTMFDRGFGPDIHKFLGPLKNRTSKSDGQGFQTILVTATMTKAVQK 322

Query: 1011 LVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCN 832
            L+DEEFQGIEHLRTSTLHKKI+SARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCN
Sbjct: 323  LIDEEFQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCN 382

Query: 831  TLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLRKFKSDDEDCPTLVCTDLAARGLDL 652
            TL SSRA DHFL ENQISTVNYHGEVPAEQRVENL KFKSDD DCPTLVCTDLAARGLDL
Sbjct: 383  TLNSSRAADHFLAENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDL 442

Query: 651  DVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKRDLNLATKIEEAMRKNESLEA 472
            DVDHV+MFDFPLNSIDYLHRTGRTARMGAKGKVTSLVA++D  LA +IEEAMRKNESLE+
Sbjct: 443  DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVARKDQQLAARIEEAMRKNESLES 502

Query: 471  ITKESVRSDITRNQITEQRRKNKNLV 394
            +T ++VR DI R +ITEQ+ K+  L+
Sbjct: 503  LTVDNVRRDIARARITEQQGKSAKLI 528


>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
            sativus]
          Length = 634

 Score =  728 bits (1879), Expect = 0.0
 Identities = 392/573 (68%), Positives = 433/573 (75%), Gaps = 6/573 (1%)
 Frame = -2

Query: 1803 IKHSMLLERLRVRHLKKDNNSATKTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSF 1624
            +KHS LLERLR RHLK+   SA KT P                               SF
Sbjct: 69   LKHSQLLERLRTRHLKE---SAPKTKPTRNTLSQSVGSAEDEMKKSEKKKKKLDE---SF 122

Query: 1623 EELGIGGEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLL 1444
            EELG+  EVMGAVREMGI+VP+EIQCIG+PAVL+GKSV+LGSHTGSGKTLAYLLPLVQLL
Sbjct: 123  EELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLEGKSVILGSHTGSGKTLAYLLPLVQLL 182

Query: 1443 RRDEQSNGILLKPRRPRAVVLCPTRELAEQVFRVAKSISHHARFRCTMVSGGGRLRPQED 1264
            RRDE+  G L+KPRRPRAVVLCPTREL+EQVFRV+KSISHHARFR TMVSGGGRLRPQED
Sbjct: 183  RRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRVSKSISHHARFRSTMVSGGGRLRPQED 242

Query: 1263 SLNNPIDMVVGTPGRILQHIEEGNLVYGDIKYLVLDEADTMFDRGFGPDIRKFLGPLKRR 1084
            SL+NPIDMVVGTPGR+LQHIE GN+VYGDIKYLVLDEADTMFD GFGPDIRKF+GPLK R
Sbjct: 243  SLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLVLDEADTMFDHGFGPDIRKFIGPLKHR 302

Query: 1083 ASKPDGLGFQTILVTATMTKPVQKLVDEEFQGIEHLRTSTLHKKISSARHDFIKLSGSEN 904
            AS  D  GFQTILVTATMTK VQKL+DEEFQGI HLRTSTLHKKI+SARHDFIKLSGSEN
Sbjct: 303  ASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSEN 362

Query: 903  KLEALLQVLEPSLAKGNRVMVFCNTLGSSRAVDHFLGENQISTVNYHGEVPAEQRVENLR 724
            KLEALLQVLEPSLAKGNRVMVFCNTL SSRAVDHFLGENQISTVNYHGEVPA++RVENL+
Sbjct: 363  KLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQISTVNYHGEVPAQKRVENLK 422

Query: 723  KFKSDDEDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSL 544
            KFKSDD DCPTLVCTDLAARGLDLDVDHV+MFDFP NSIDYLHRTGRTARMGAKGKVTSL
Sbjct: 423  KFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSL 482

Query: 543  VAKRDLNLATKIEEAMRKNESLEAITKESVRSDITRNQITEQRRKNKNLVTIXXXXXXXX 364
            V K+D  LAT+IEEA+RKNESLE++T +SV  D+ RN+ITE + KN  L+          
Sbjct: 483  VGKKDNILATRIEEAIRKNESLESLTADSVWRDVARNRITEHKTKNAKLI---KASTGRS 539

Query: 363  XXXXXXXXXXXXXXXKQSPPVKPT----TRKGITXXXXXXXXXXXXXXXXXXSENKQTG- 199
                            +  P K +    TRK                        KQ   
Sbjct: 540  GAKSATSAPKSSSVHSKGEPGKASYSERTRKPGVSVSKPVKSSRNIPRKPSSETKKQVAS 599

Query: 198  -KRGSVTTKSTNSKLSVVGFRGRNSPPNKKQSL 103
             KR     KS+  KL+VVGFRGR++    ++S+
Sbjct: 600  RKRPGSAIKSSGQKLNVVGFRGRSNQSGNRRSV 632


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