BLASTX nr result
ID: Glycyrrhiza24_contig00004150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00004150
(2002 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homol... 494 e-137
ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homol... 493 e-137
ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257... 414 e-113
emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera] 413 e-113
ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C,... 389 e-105
>ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 494 bits (1271), Expect = e-137
Identities = 274/452 (60%), Positives = 277/452 (61%), Gaps = 7/452 (1%)
Frame = +2
Query: 212 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 391
MDSDQGKLFIGGISWDT EDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADP+IL
Sbjct: 1 MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL 60
Query: 392 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 571
DRVLEDKHVIDGRTVDAK+AFSREDQQISVTSR GN NS MNS NGGNIRTKKIFVGGLP
Sbjct: 61 DRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSENGGNIRTKKIFVGGLP 120
Query: 572 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 751
PTLTEEKFR YFESYGHVTDVVVMYDQNTGRPRGFGFISFDTE+AVDRVLHKSFHDLNGK
Sbjct: 121 PTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGK 180
Query: 752 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRMDSSRYMQPQ 931
QVEVKRALPKDANP DGRMDSSRYMQPQ
Sbjct: 181 QVEVKRALPKDANPGASGRMMGGAGGGGAGIGGYQGYGASGGSQNAYDGRMDSSRYMQPQ 240
Query: 932 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1111
SAAGGFPPYGSSAYSAP
Sbjct: 241 SAAGGFPPYGSSAYSAPGYGYGPANNGIGYGAYGSYGSATAGYGGPAGATYGNPNVPNAA 300
Query: 1112 XXXXXXXXXRSSWPAQAPSGYGSMGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1291
RSSWPAQAPSGYGSMGY
Sbjct: 301 YAGGPPGGPRSSWPAQAPSGYGSMGYGNTAAWGAPSGGAGSGGGGPGSATAGQSPGGAAG 360
Query: 1292 XXXXXXXXXXXXXXXXSD-----PSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXX 1456
SD S YG VGGRTGS PNSNA
Sbjct: 361 YGNQGYGYGGYAGYGGSDSSYGNSSAYGTVGGRTGSGPNSNASAPGGTELTSSGGSGNYM 420
Query: 1457 XXXXXDANGNSGYGNAAWRSEQ--ASGNYGTP 1546
DANGNSGYGNAAWRSEQ ASGNYGTP
Sbjct: 421 GGGYGDANGNSGYGNAAWRSEQTHASGNYGTP 452
>ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 493 bits (1270), Expect = e-137
Identities = 275/452 (60%), Positives = 280/452 (61%), Gaps = 7/452 (1%)
Frame = +2
Query: 212 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 391
MDSDQGKLFIGGISWDT EDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADP+IL
Sbjct: 1 MDSDQGKLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNIL 60
Query: 392 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 571
DRVLEDKHVIDGRTVDAK+AFSREDQQISVTSR GN NS MNSGNGGNIRTKKIFVGGLP
Sbjct: 61 DRVLEDKHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSGNGGNIRTKKIFVGGLP 120
Query: 572 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 751
PTLTEEKFRQYFESYG+VTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK
Sbjct: 121 PTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 180
Query: 752 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRMDSSRYMQPQ 931
QVEVKRALPKDANP DGRMDSSRYMQPQ
Sbjct: 181 QVEVKRALPKDANPGASGRMMGGAGGGGYQGYGASGGNQNAY-----DGRMDSSRYMQPQ 235
Query: 932 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1111
SAAGGFPPYGSSAYSAP
Sbjct: 236 SAAGGFPPYGSSAYSAPGYGYGPASNGIGYGAYGSYGGATAGYGGPAAATYGNPNVPNAA 295
Query: 1112 XXXXXXXXXRSSWPAQAPSGYGSMGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1291
RS+WPAQAPSGYGSMGY
Sbjct: 296 YAGGPPGGPRSTWPAQAPSGYGSMGYGNTAAWGAPSGGAGSGGGGPGSATAGQSPGGAAG 355
Query: 1292 XXXXXXXXXXXXXXXXSDPS-----VYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXX 1456
SD S YG VGGRTGSAPN+NA
Sbjct: 356 YGNQGYGYGGYGGYGGSDSSYGNSGAYGTVGGRTGSAPNNNASASGGSELTSSGGSGNYM 415
Query: 1457 XXXXXDANGNSGYGNAAWRSEQ--ASGNYGTP 1546
DANGNSGYGNAAWRSEQ ASGNYGTP
Sbjct: 416 GGGYGDANGNSGYGNAAWRSEQTHASGNYGTP 447
>ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 414 bits (1064), Expect = e-113
Identities = 233/446 (52%), Positives = 263/446 (58%), Gaps = 3/446 (0%)
Frame = +2
Query: 212 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 391
MDSDQGKLFIGGISW+T+EDKLKE+FG+YG+V VMR+K TG+PRGFGFVVFADPSIL
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 392 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 571
DRVL++KH+IDGRTV+AKRA SRE+QQ S SR GN NSA NSG GGN++TKKIFVGGLP
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTS--SRAGNFNSARNSGGGGNVKTKKIFVGGLP 118
Query: 572 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 751
PTL+EE FRQYFE++GHVTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRVL+K+FHDLNGK
Sbjct: 119 PTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGK 178
Query: 752 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRMDSSRYMQPQ 931
QVEVKRALPKDANP DGRMDS+RYMQPQ
Sbjct: 179 QVEVKRALPKDANP--GGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQ 236
Query: 932 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1111
+ GGFPPYGSS YSAP
Sbjct: 237 NTGGGFPPYGSSGYSAPGYGYGPANNGMGYGGYGGYGGANPGYGGPAGAPYGNPNVPNAG 296
Query: 1112 XXXXXXXXXRSSWPAQAPSGYGSMGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1288
RSSW +QAPSGYG +GY
Sbjct: 297 YAGGPPGAPRSSWNSQAPSGYGGVGYGNAASWGSSAGGGAGSGGTGSASSGQSPSGAAGY 356
Query: 1289 XXXXXXXXXXXXXXXXXSDPSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXXXXXX 1468
++P+ YGAVGGRTGS PNSNA
Sbjct: 357 GNQSYGYGGYGGSEGSYANPTGYGAVGGRTGSGPNSNA-----GGGELQGSGGGYMGGGY 411
Query: 1469 XDANGNSGYGNAAWRSE--QASGNYG 1540
DANGNSGYGNAAW+S+ QASGNYG
Sbjct: 412 GDANGNSGYGNAAWKSDPSQASGNYG 437
>emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 413 bits (1062), Expect = e-113
Identities = 232/446 (52%), Positives = 264/446 (59%), Gaps = 3/446 (0%)
Frame = +2
Query: 212 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 391
MDSDQGKLFIGGISW+T+EDKLKE+FG+YG+V VMR+K TG+PRGFGFVVFADPSIL
Sbjct: 1 MDSDQGKLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSIL 60
Query: 392 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 571
DRVL++KH+IDGRTV+AKRA SRE+QQ S SR GN NSA NSG GGN++TKKIFVGGLP
Sbjct: 61 DRVLQEKHIIDGRTVEAKRALSREEQQTS--SRAGNFNSARNSGGGGNVKTKKIFVGGLP 118
Query: 572 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 751
PTL+EE FRQYFE++GHVTDVVVMYDQ+T RPRGFGF+SFDTEDAVDRVL+K+FHDLNGK
Sbjct: 119 PTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGK 178
Query: 752 QVEVKRALPKDANPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRMDSSRYMQPQ 931
QVEVKRALPKDANP DGRMDS+RYMQPQ
Sbjct: 179 QVEVKRALPKDANP--GGGSRSMGGGAGAVAGGYQGYGASGGNPTTYDGRMDSNRYMQPQ 236
Query: 932 SAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1111
+ GGFPPYGSS YSAP
Sbjct: 237 NTGGGFPPYGSSGYSAPGYGYGPANNGMGYGGYGGYGGANPGYGGPAGAPYGNPNVPNAG 296
Query: 1112 XXXXXXXXXRSSWPAQAPSGYGSMGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1288
RSSW +QAPSGYG++GY
Sbjct: 297 YAGGPPGAPRSSWNSQAPSGYGAVGYGNAASWGPSAGGGAGSGGTGSASSGQSPSGAAGY 356
Query: 1289 XXXXXXXXXXXXXXXXXSDPSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXXXXXX 1468
++P+ YGAVGGRTGS PNSNA
Sbjct: 357 GNQSYGYGGYGGSEGSYANPTGYGAVGGRTGSGPNSNA-----GGGELQGSGGGYMGGGY 411
Query: 1469 XDANGNSGYGNAAWRSE--QASGNYG 1540
DANGNSGYGNA+W+S+ QASGNYG
Sbjct: 412 GDANGNSGYGNASWKSDPSQASGNYG 437
>ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223532245|gb|EEF34049.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 389 bits (999), Expect = e-105
Identities = 221/450 (49%), Positives = 251/450 (55%), Gaps = 6/450 (1%)
Frame = +2
Query: 212 MDSDQGKLFIGGISWDTNEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPSIL 391
MDSDQGKLFIGGISW+T EDKLK++F YGDV+ T VMR+K TG+PRGFGFVVFADP+IL
Sbjct: 1 MDSDQGKLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNIL 60
Query: 392 DRVLEDKHVIDGRTVDAKRAFSREDQQISVTSRTGNPNSAMNSGNGGNIRTKKIFVGGLP 571
DRVL+DKH IDGRTV+AK+A SRE+QQ + +R+GN N NSG+GGNIRTKKIFVGGLP
Sbjct: 61 DRVLQDKHTIDGRTVEAKKALSREEQQTN--ARSGNLNPPRNSGSGGNIRTKKIFVGGLP 118
Query: 572 PTLTEEKFRQYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGK 751
P LT+++FRQYFE+YG VTDVV+MYDQNT RPRGFGFISFD EDAVDRVLHK+FHDLNGK
Sbjct: 119 PALTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNGK 178
Query: 752 QVEVKRALPKDANP----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRMDSSRY 919
QVEVKRALPKDANP +GR+DS+RY
Sbjct: 179 QVEVKRALPKDANPGGGNRSMGGGGNIGGGGGGGAGGYQGYGASGGNASSYEGRIDSNRY 238
Query: 920 MQPQSAAGGFPPYGSSAYSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1099
MQ Q G FPPYGSS YS P
Sbjct: 239 MQSQGTGGSFPPYGSSGYSGPGYGYGPANNGVGYGGYGSYGGAGAGYGGPAGAAYGNPAV 298
Query: 1100 XXXXXXXXXXXXXRSSWPAQAPSGYGSMGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1279
RSSW +QAPSGYG+MGY
Sbjct: 299 PNAGYASGPPGAPRSSWSSQAPSGYGAMGY-GNAASWGANTGAGSGGPGSAPAGQSPSGS 357
Query: 1280 XXXXXXXXXXXXXXXXXXXXSDPSVYGAVGGRTGSAPNSNAXXXXXXXXXXXXXXXXXXX 1459
+P+ Y AVGGR+G APNSN
Sbjct: 358 AGYGNQGYGYGSYGGNDGSYGNPAGYSAVGGRSGGAPNSNV----GAGGELQGSGGGYMG 413
Query: 1460 XXXXDANGNSGYGNAAWRSE--QASGNYGT 1543
DANGN GYG A WRS+ QASGNYGT
Sbjct: 414 SDYGDANGNPGYGTAGWRSDPSQASGNYGT 443