BLASTX nr result

ID: Glycyrrhiza24_contig00004147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004147
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   130   9e-29
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   117   1e-24
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   112   4e-23
ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   107   8e-22
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   100   1e-19

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/72 (86%), Positives = 66/72 (91%)
 Frame = +3

Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449
           MRREQ +S CLTDVEPDRISCLPGHVIDQ+LSH+SIREAVRTSVLSSKWRYKW+ LP LV
Sbjct: 1   MRREQPRSPCLTDVEPDRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILV 60

Query: 450 FDNQCVSVASQD 485
           FD  CVSVASQD
Sbjct: 61  FDTHCVSVASQD 72


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/72 (73%), Positives = 63/72 (87%)
 Frame = +3

Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449
           MRREQ QS C+TD EPDRIS LPGH+IDQILS + I+EAVRTS+LS+KWRYKW+ LPNLV
Sbjct: 1   MRREQSQSPCVTDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLV 60

Query: 450 FDNQCVSVASQD 485
           FD+QC+S  S+D
Sbjct: 61  FDSQCISDTSED 72


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/72 (69%), Positives = 62/72 (86%)
 Frame = +3

Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449
           ++ EQ QS C+TD EPDRIS LPGH+IDQILS + I+EAVRTS+LS+KWRYKW+ LPNLV
Sbjct: 233 LKWEQSQSPCVTDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLV 292

Query: 450 FDNQCVSVASQD 485
           FD+QC+S  S+D
Sbjct: 293 FDSQCISDTSED 304


>ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 293

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/71 (67%), Positives = 59/71 (83%)
 Frame = +3

Query: 273 RREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLVF 452
           RREQ QS C++D EPDR+S LPGHVID ILS + I+EA RTS+LS+ WRYKW+ LPNLVF
Sbjct: 13  RREQSQSPCVSDEEPDRVSSLPGHVIDHILSILPIKEAARTSILSTNWRYKWTTLPNLVF 72

Query: 453 DNQCVSVASQD 485
           DN+C+S  S+D
Sbjct: 73  DNECLSETSKD 83


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/72 (66%), Positives = 59/72 (81%)
 Frame = +3

Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449
           M+RE  +  CL + E DRIS LPGHV+DQILS +SIR+AVRTS LS KWRYKW+ +P+LV
Sbjct: 1   MKREPPKFPCL-ETELDRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLV 59

Query: 450 FDNQCVSVASQD 485
           FDN+CVS+ SQD
Sbjct: 60  FDNKCVSIPSQD 71


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