BLASTX nr result
ID: Glycyrrhiza24_contig00004147
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00004147 (489 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 130 9e-29 ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 117 1e-24 ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 112 4e-23 ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 107 8e-22 ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ... 100 1e-19 >ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max] Length = 427 Score = 130 bits (328), Expect = 9e-29 Identities = 62/72 (86%), Positives = 66/72 (91%) Frame = +3 Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449 MRREQ +S CLTDVEPDRISCLPGHVIDQ+LSH+SIREAVRTSVLSSKWRYKW+ LP LV Sbjct: 1 MRREQPRSPCLTDVEPDRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILV 60 Query: 450 FDNQCVSVASQD 485 FD CVSVASQD Sbjct: 61 FDTHCVSVASQD 72 >ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 428 Score = 117 bits (293), Expect = 1e-24 Identities = 53/72 (73%), Positives = 63/72 (87%) Frame = +3 Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449 MRREQ QS C+TD EPDRIS LPGH+IDQILS + I+EAVRTS+LS+KWRYKW+ LPNLV Sbjct: 1 MRREQSQSPCVTDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLV 60 Query: 450 FDNQCVSVASQD 485 FD+QC+S S+D Sbjct: 61 FDSQCISDTSED 72 >ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 660 Score = 112 bits (279), Expect = 4e-23 Identities = 50/72 (69%), Positives = 62/72 (86%) Frame = +3 Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449 ++ EQ QS C+TD EPDRIS LPGH+IDQILS + I+EAVRTS+LS+KWRYKW+ LPNLV Sbjct: 233 LKWEQSQSPCVTDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLV 292 Query: 450 FDNQCVSVASQD 485 FD+QC+S S+D Sbjct: 293 FDSQCISDTSED 304 >ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein [Medicago truncatula] Length = 293 Score = 107 bits (268), Expect = 8e-22 Identities = 48/71 (67%), Positives = 59/71 (83%) Frame = +3 Query: 273 RREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLVF 452 RREQ QS C++D EPDR+S LPGHVID ILS + I+EA RTS+LS+ WRYKW+ LPNLVF Sbjct: 13 RREQSQSPCVSDEEPDRVSSLPGHVIDHILSILPIKEAARTSILSTNWRYKWTTLPNLVF 72 Query: 453 DNQCVSVASQD 485 DN+C+S S+D Sbjct: 73 DNECLSETSKD 83 >ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 426 Score = 100 bits (249), Expect = 1e-19 Identities = 48/72 (66%), Positives = 59/72 (81%) Frame = +3 Query: 270 MRREQLQSTCLTDVEPDRISCLPGHVIDQILSHMSIREAVRTSVLSSKWRYKWSALPNLV 449 M+RE + CL + E DRIS LPGHV+DQILS +SIR+AVRTS LS KWRYKW+ +P+LV Sbjct: 1 MKREPPKFPCL-ETELDRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLV 59 Query: 450 FDNQCVSVASQD 485 FDN+CVS+ SQD Sbjct: 60 FDNKCVSIPSQD 71