BLASTX nr result

ID: Glycyrrhiza24_contig00004135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004135
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236695.1| uncharacterized protein LOC100500093 [Glycin...   252   1e-64
ref|NP_001235302.1| uncharacterized protein LOC100305687 [Glycin...   251   2e-64
ref|NP_001235118.1| uncharacterized protein LOC100499723 [Glycin...   250   3e-64
ref|XP_003530295.1| PREDICTED: 40S ribosomal protein S12-like [G...   248   2e-63
ref|XP_003611335.1| 40S ribosomal protein S12 [Medicago truncatu...   246   4e-63

>ref|NP_001236695.1| uncharacterized protein LOC100500093 [Glycine max]
           gi|255629085|gb|ACU14887.1| unknown [Glycine max]
          Length = 141

 Score =  252 bits (643), Expect = 1e-64
 Identities = 126/141 (89%), Positives = 132/141 (93%), Gaps = 1/141 (0%)
 Frame = -3

Query: 833 MSSEEGAVAAE-PAVSIPGEPMDIMTALQLVLKKSMAYNGLARGLHQSAKAIEKNAAQLC 657
           MS EE AVAAE PA SIPGEPMDIMTALQLVL+KS+AY GLARGLH+ AK IEK+AAQLC
Sbjct: 1   MSGEEVAVAAEAPAASIPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLC 60

Query: 656 ILAEDCDQADYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTSCSCVV 477
           +LAEDCDQ DYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVT CSCVV
Sbjct: 61  VLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVV 120

Query: 476 VKDFGEEHEAYNVVLQHVKSN 414
           VKDFGEEHEAYNVVLQHVK+N
Sbjct: 121 VKDFGEEHEAYNVVLQHVKAN 141


>ref|NP_001235302.1| uncharacterized protein LOC100305687 [Glycine max]
           gi|255626315|gb|ACU13502.1| unknown [Glycine max]
          Length = 140

 Score =  251 bits (641), Expect = 2e-64
 Identities = 124/139 (89%), Positives = 129/139 (92%)
 Frame = -3

Query: 833 MSSEEGAVAAEPAVSIPGEPMDIMTALQLVLKKSMAYNGLARGLHQSAKAIEKNAAQLCI 654
           MS EE  VAAEPA +IPGEPMDIMTALQLVL KS+AY GLARGLH+ AK IEK+AAQLC+
Sbjct: 1   MSGEEVVVAAEPAAAIPGEPMDIMTALQLVLGKSLAYGGLARGLHEGAKVIEKHAAQLCV 60

Query: 653 LAEDCDQADYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTSCSCVVV 474
           LAEDCDQ DYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVT CSCVVV
Sbjct: 61  LAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVV 120

Query: 473 KDFGEEHEAYNVVLQHVKS 417
           KDFGEEHEAYNVVLQHVKS
Sbjct: 121 KDFGEEHEAYNVVLQHVKS 139


>ref|NP_001235118.1| uncharacterized protein LOC100499723 [Glycine max]
           gi|255626071|gb|ACU13380.1| unknown [Glycine max]
          Length = 141

 Score =  250 bits (639), Expect = 3e-64
 Identities = 125/141 (88%), Positives = 131/141 (92%), Gaps = 1/141 (0%)
 Frame = -3

Query: 833 MSSEEGAVAAE-PAVSIPGEPMDIMTALQLVLKKSMAYNGLARGLHQSAKAIEKNAAQLC 657
           MS EE AVA E PA SIPGEPMDIMTALQLVL+KS+AY GLARGLH+ AK IEK+AAQLC
Sbjct: 1   MSGEEVAVAVEVPATSIPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLC 60

Query: 656 ILAEDCDQADYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTSCSCVV 477
           +LAEDCDQ DYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVT CSCVV
Sbjct: 61  VLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVV 120

Query: 476 VKDFGEEHEAYNVVLQHVKSN 414
           VKDFGEEHEAYNVVLQHVK+N
Sbjct: 121 VKDFGEEHEAYNVVLQHVKAN 141


>ref|XP_003530295.1| PREDICTED: 40S ribosomal protein S12-like [Glycine max]
          Length = 143

 Score =  248 bits (632), Expect = 2e-63
 Identities = 122/142 (85%), Positives = 130/142 (91%), Gaps = 3/142 (2%)
 Frame = -3

Query: 833 MSSEEGAVAAEPAVS---IPGEPMDIMTALQLVLKKSMAYNGLARGLHQSAKAIEKNAAQ 663
           MS EEG +A EPA +   IPGEPMDIMTALQLVL+KS+AY GL+RGLH+ AK IEK+AAQ
Sbjct: 1   MSGEEGVIAVEPAAAAAAIPGEPMDIMTALQLVLRKSLAYGGLSRGLHEGAKVIEKHAAQ 60

Query: 662 LCILAEDCDQADYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTSCSC 483
           LC+LAEDCDQ DYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVT CSC
Sbjct: 61  LCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSC 120

Query: 482 VVVKDFGEEHEAYNVVLQHVKS 417
           VVVKDFGEEHEAYNVVLQHVKS
Sbjct: 121 VVVKDFGEEHEAYNVVLQHVKS 142


>ref|XP_003611335.1| 40S ribosomal protein S12 [Medicago truncatula]
           gi|355512670|gb|AES94293.1| 40S ribosomal protein S12
           [Medicago truncatula]
          Length = 142

 Score =  246 bits (629), Expect = 4e-63
 Identities = 123/142 (86%), Positives = 129/142 (90%), Gaps = 2/142 (1%)
 Frame = -3

Query: 833 MSSEEGAVAAEPAVS--IPGEPMDIMTALQLVLKKSMAYNGLARGLHQSAKAIEKNAAQL 660
           MS EE  VA EP V+  IPGEPMDIMTALQLVL+KS AY GLARGLH+ AK IEK+AAQL
Sbjct: 1   MSGEEEVVAVEPVVAAAIPGEPMDIMTALQLVLRKSRAYGGLARGLHEGAKVIEKHAAQL 60

Query: 659 CILAEDCDQADYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTSCSCV 480
           C+LAEDCDQ DYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVT CSCV
Sbjct: 61  CVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCV 120

Query: 479 VVKDFGEEHEAYNVVLQHVKSN 414
           VVKDFGEEHEAYNVVLQHVK+N
Sbjct: 121 VVKDFGEEHEAYNVVLQHVKAN 142


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