BLASTX nr result

ID: Glycyrrhiza24_contig00004081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004081
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597242.1| hypothetical protein MTR_2g094410 [Medicago ...   106   1e-40
gb|AFK43089.1| unknown [Medicago truncatula]                          106   6e-40
ref|XP_002314267.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-30
ref|XP_002864697.1| hypothetical protein ARALYDRAFT_496217 [Arab...    80   1e-29
ref|NP_200876.1| uncharacterized protein [Arabidopsis thaliana] ...    78   5e-29

>ref|XP_003597242.1| hypothetical protein MTR_2g094410 [Medicago truncatula]
           gi|355486290|gb|AES67493.1| hypothetical protein
           MTR_2g094410 [Medicago truncatula]
          Length = 156

 Score =  106 bits (264), Expect(2) = 1e-40
 Identities = 54/93 (58%), Positives = 71/93 (76%)
 Frame = +3

Query: 108 TTSKGHHIGRTTHRFLPAMDRDYSVSDSTFEFDESELYNSARANSPEFRRSVRASRFHCN 287
           TT+K HH+ + T+ FLP+ + + SV+DS FEFDESELYN+  +NSPEFR+S+RASRF   
Sbjct: 5   TTTKNHHVRKQTYHFLPSTNNN-SVTDSLFEFDESELYNT-NSNSPEFRKSIRASRFQGT 62

Query: 288 SPSSGGRAGAPASMPMNVPDWSKILGDEYRQGR 386
           S SS    G  +S+P+NVPDWSKILG++YR  R
Sbjct: 63  S-SSSTTDGRVSSLPVNVPDWSKILGEDYRHNR 94



 Score = 87.8 bits (216), Expect(2) = 1e-40
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = +1

Query: 502 RVPPHEFLARTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGF 633
           ++PPHEFLARTR+AS SVHEGVGRTLKGRDLSRVRNAIWAKTGF
Sbjct: 111 KIPPHEFLARTRMASFSVHEGVGRTLKGRDLSRVRNAIWAKTGF 154


>gb|AFK43089.1| unknown [Medicago truncatula]
          Length = 156

 Score =  106 bits (264), Expect(2) = 6e-40
 Identities = 54/93 (58%), Positives = 71/93 (76%)
 Frame = +3

Query: 108 TTSKGHHIGRTTHRFLPAMDRDYSVSDSTFEFDESELYNSARANSPEFRRSVRASRFHCN 287
           TT+K HH+ + T+ FLP+ + + SV+DS FEFDESELYN+  +NSPEFR+S+RASRF   
Sbjct: 5   TTTKNHHVRKQTYHFLPSTNNN-SVTDSLFEFDESELYNT-NSNSPEFRKSIRASRFQGT 62

Query: 288 SPSSGGRAGAPASMPMNVPDWSKILGDEYRQGR 386
           S SS    G  +S+P+NVPDWSKILG++YR  R
Sbjct: 63  S-SSSTTDGRVSSLPVNVPDWSKILGEDYRHNR 94



 Score = 85.1 bits (209), Expect(2) = 6e-40
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = +1

Query: 502 RVPPHEFLARTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGF 633
           ++PPHEFLARTR+AS SVHEGVG TLKGRDLSRVRNAIWAKTGF
Sbjct: 111 KIPPHEFLARTRMASFSVHEGVGGTLKGRDLSRVRNAIWAKTGF 154


>ref|XP_002314267.1| predicted protein [Populus trichocarpa] gi|222850675|gb|EEE88222.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 80.1 bits (196), Expect(2) = 5e-30
 Identities = 40/48 (83%), Positives = 41/48 (85%), Gaps = 4/48 (8%)
 Frame = +1

Query: 502 RVPPHEFLAR----TRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGF 633
           RVPPHE LAR    TRIAS SVHEG+GRTLKGRDLSRVRNAIW KTGF
Sbjct: 133 RVPPHELLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 180



 Score = 78.2 bits (191), Expect(2) = 5e-30
 Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 15/106 (14%)
 Frame = +3

Query: 111 TSKGHHIGRTTHRFLPAMDRDYSVS---DSTFEFDESELY--NSARANSPEFRRSVRASR 275
           TSKG    R  +RFL + D  + V    +S FE DES++Y   +AR+NSPEFR+ V +SR
Sbjct: 3   TSKGC-FARQNYRFL-STDLTHHVPLTHNSPFELDESDIYYHTTARSNSPEFRKPVLSSR 60

Query: 276 FH---------CNSPSSGGRA-GAPASMPMNVPDWSKILGDEYRQG 383
                      C     GGRA G P+S+P+N+PDWSKIL DEYR+G
Sbjct: 61  LAKKSTPAAAACRRTDPGGRACGTPSSLPVNIPDWSKILKDEYRRG 106


>ref|XP_002864697.1| hypothetical protein ARALYDRAFT_496217 [Arabidopsis lyrata subsp.
           lyrata] gi|297310532|gb|EFH40956.1| hypothetical protein
           ARALYDRAFT_496217 [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 79.7 bits (195), Expect(2) = 1e-29
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +3

Query: 111 TSKGHHIGRTTHRFLPAMDRDY-SVSDSTFEFDESELYNSARANSPEFRRSVRASRFHCN 287
           T K ++  R ++RFL      Y + SDS  EFDES+LYN   ++SP+FRR + +S     
Sbjct: 3   TGKSYY-ARPSYRFLGTDQPSYFTASDSGLEFDESDLYNPIHSDSPDFRRIISSSARSGK 61

Query: 288 SPSSGGRAGAPASMPMNVPDWSKILGDEYRQGR 386
            PS+   A A +S+P+NVPDWSKIL +EYR  R
Sbjct: 62  KPSNRPSAVAASSLPINVPDWSKILREEYRDNR 94



 Score = 77.0 bits (188), Expect(2) = 1e-29
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = +1

Query: 505 VPPHEFLARTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGF 633
           +PPHEFLA+TR+AS SVHEGVGRTLKGRDLSRVRNAI+ K GF
Sbjct: 114 LPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKIGF 156


>ref|NP_200876.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759332|dbj|BAB09841.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380830|gb|AAL36227.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259627|gb|AAM14170.1| unknown protein [Arabidopsis
           thaliana] gi|332009983|gb|AED97366.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 163

 Score = 78.2 bits (191), Expect(2) = 5e-29
 Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = +3

Query: 111 TSKGHHIGRTTHRFLPAMDRDY-SVSDSTFEFDESELYNSARANSPEFRR----SVRASR 275
           T K ++  R ++RFL      Y + SDS  EFDES+L+N   ++SP+F R    SVR+ +
Sbjct: 3   TGKSYY-ARPSYRFLGTDQPSYFTASDSGLEFDESDLFNPIHSDSPDFCRKISSSVRSGK 61

Query: 276 FHCNSPSSGGRAGAPASMPMNVPDWSKILGDEYRQGR 386
              N PS+   A A +S+P+NVPDWSKIL  EYR  R
Sbjct: 62  KSSNRPSAASSAAAASSLPVNVPDWSKILRGEYRDNR 98



 Score = 76.6 bits (187), Expect(2) = 5e-29
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = +1

Query: 505 VPPHEFLARTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGF 633
           +PPHEFLA+TR+AS SVHEGVGRTLKGRDLSRVRNAI+ K GF
Sbjct: 119 LPPHEFLAKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGF 161


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