BLASTX nr result

ID: Glycyrrhiza24_contig00004074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004074
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609194.1| Transmembrane protein [Medicago truncatula] ...   365   1e-98
ref|XP_003549793.1| PREDICTED: transmembrane protein 19-like [Gl...   346   7e-93
ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cu...   319   9e-85
ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|2...   306   8e-81
ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis v...   306   1e-80

>ref|XP_003609194.1| Transmembrane protein [Medicago truncatula]
            gi|355510249|gb|AES91391.1| Transmembrane protein
            [Medicago truncatula] gi|388493924|gb|AFK35028.1| unknown
            [Medicago truncatula]
          Length = 290

 Score =  365 bits (937), Expect = 1e-98
 Identities = 190/291 (65%), Positives = 220/291 (75%)
 Frame = -3

Query: 1187 MDSSPLQWIFQPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAMLLA 1008
            MD S  QWI +PLVAV+V  +IAFRAHRK SLSTSGA+ GF VM+LH+FVG+RFAAM+ A
Sbjct: 1    MDPSFSQWI-RPLVAVTVGSLIAFRAHRKNSLSTSGAIAGFFVMSLHVFVGFRFAAMIFA 59

Query: 1007 FFFTSSRLTKMGEDKKKAIEPDFKEGGQRNWVQVLANSGIASVLIVAIWVLTQGQDKCLN 828
            FFFTSS LTK G+D K+ I+P+FK+GGQRNW+QVLANSGIASVLIVA+WVLT+G+D+C+N
Sbjct: 60   FFFTSSALTKKGQDTKRLIDPEFKQGGQRNWIQVLANSGIASVLIVALWVLTEGKDQCMN 119

Query: 827  SKDSALITSLIGGVIGHYSCCNGDTWSSEIGILSDERPRLITTFKPXXXXXXXXXXXXXX 648
            SKDSALIT+LIGGVIGHY CCNGDTWSSE+G+LS++RPRLITTFKP              
Sbjct: 120  SKDSALITALIGGVIGHYCCCNGDTWSSELGVLSNDRPRLITTFKPVRKGTNGGVTKTGL 179

Query: 647  XXXXXXXXXXXXSFVLLELSTIRCESVGVIKQLLAIPIATMAGLCGSIIDSLLGATLQFS 468
                        S+VLLEL TIRC S  V+KQLL IP+ T+AGLCGSIIDSLLGATLQFS
Sbjct: 180  LAAAAGGSVIGVSYVLLELLTIRCGSDRVLKQLLVIPLTTVAGLCGSIIDSLLGATLQFS 239

Query: 467  GFCSIRQXXXXXXXXXXXKISGLSILDNNAVNXXXXXXXXXXXXLACLCIF 315
            GFCSIRQ           +ISGLSILDNNAVN            +ACL IF
Sbjct: 240  GFCSIRQKVVGNPGTTVKRISGLSILDNNAVNFVSILLTTILTSIACLYIF 290


>ref|XP_003549793.1| PREDICTED: transmembrane protein 19-like [Glycine max]
          Length = 293

 Score =  346 bits (888), Expect = 7e-93
 Identities = 182/283 (64%), Positives = 209/283 (73%), Gaps = 2/283 (0%)
 Frame = -3

Query: 1157 QPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAMLLAFFFTSSRLTK 978
            Q  +AV +AF IAFRAHRKKSLSTSGA+ GF VMALHIFVGYRF AMLLAFF++SS LTK
Sbjct: 11   QLFIAVFIAFSIAFRAHRKKSLSTSGAIAGFFVMALHIFVGYRFGAMLLAFFYSSSTLTK 70

Query: 977  MGEDKKKAIEPDFKEGGQRNWVQVLANSGIASVLIVAIWVLTQGQDKCLNSKDSALITSL 798
            +GED K+ ++P+FKEGGQRNW+QVLANSGIASVL+VAIWVLT+G+DKCLNS++S LIT+L
Sbjct: 71   VGEDIKRIVDPEFKEGGQRNWIQVLANSGIASVLVVAIWVLTEGKDKCLNSEESPLITAL 130

Query: 797  IGGVIGHYSCCNGDTWSSEIGILSDERPRLITTFKPXXXXXXXXXXXXXXXXXXXXXXXX 618
            IG VIGHYSCCNGDTWSSE+GILSDE+PRLIT FK                         
Sbjct: 131  IGAVIGHYSCCNGDTWSSELGILSDEKPRLITNFKFVKKGTNGGVTKRGLLAAAAAGSVI 190

Query: 617  XXSFVLLELSTIRCESVG--VIKQLLAIPIATMAGLCGSIIDSLLGATLQFSGFCSIRQX 444
              SFVLL +S  RCE  G  V+KQLL IPIAT+AGLCGS+IDSLLGATLQF+GFCSIR  
Sbjct: 191  GLSFVLLGISATRCEGKGSTVLKQLLVIPIATLAGLCGSVIDSLLGATLQFTGFCSIRGK 250

Query: 443  XXXXXXXXXXKISGLSILDNNAVNXXXXXXXXXXXXLACLCIF 315
                      +ISG +ILDNNAVN            +ACL IF
Sbjct: 251  MVGKPGPTVRRISGANILDNNAVNFVSILLTSFFTSIACLYIF 293


>ref|XP_004149856.1| PREDICTED: transmembrane protein 19-like [Cucumis sativus]
            gi|449508273|ref|XP_004163269.1| PREDICTED: transmembrane
            protein 19-like [Cucumis sativus]
          Length = 287

 Score =  319 bits (818), Expect = 9e-85
 Identities = 160/283 (56%), Positives = 198/283 (69%)
 Frame = -3

Query: 1163 IFQPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAMLLAFFFTSSRL 984
            + QP VAV +A +IAFRA+R+KSL+ SGAL GFIVM+ H  + YR+ A+LL FFFTSS+L
Sbjct: 5    LIQPSVAVIIASIIAFRAYRRKSLNLSGALAGFIVMSTHFAINYRYGAVLLVFFFTSSKL 64

Query: 983  TKMGEDKKKAIEPDFKEGGQRNWVQVLANSGIASVLIVAIWVLTQGQDKCLNSKDSALIT 804
            TK+GE+KK+ ++ DFKEGGQRNW+QV+ NSGIA+VL V IW +T GQDKCL+SKDSAL+T
Sbjct: 65   TKVGEEKKRVVDADFKEGGQRNWIQVVFNSGIATVLAVIIWKITGGQDKCLDSKDSALVT 124

Query: 803  SLIGGVIGHYSCCNGDTWSSEIGILSDERPRLITTFKPXXXXXXXXXXXXXXXXXXXXXX 624
            +LIGG++GHYSCCNGDTWSSE+GILSD  PRLIT FKP                      
Sbjct: 125  ALIGGILGHYSCCNGDTWSSELGILSDATPRLITNFKPVRKGTNGAVTNAGLLAATAAGA 184

Query: 623  XXXXSFVLLELSTIRCESVGVIKQLLAIPIATMAGLCGSIIDSLLGATLQFSGFCSIRQX 444
                +FVLL   T +C+    +KQLL IP+A +AGLCGS+IDSLLGAT+QFSGFC++R  
Sbjct: 185  VIGLTFVLLGFFTTKCDYGTTLKQLLVIPLAAVAGLCGSVIDSLLGATVQFSGFCTVRNK 244

Query: 443  XXXXXXXXXXKISGLSILDNNAVNXXXXXXXXXXXXLACLCIF 315
                      KISGL+ILDNN VN             AC+ IF
Sbjct: 245  VVGKPGPTVKKISGLNILDNNGVNLVSVLLTTMLTSTACIYIF 287


>ref|XP_002324403.1| predicted protein [Populus trichocarpa] gi|222865837|gb|EEF02968.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  306 bits (784), Expect = 8e-81
 Identities = 156/283 (55%), Positives = 194/283 (68%)
 Frame = -3

Query: 1163 IFQPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAMLLAFFFTSSRL 984
            + QP VAV ++FVIA +A+R+KSL  +GA+ GFIVM LH  + YRF A+LL FFF+SS+L
Sbjct: 5    VIQPSVAVLISFVIAIKAYRRKSLDVTGAVAGFIVMTLHFAISYRFGAILLVFFFSSSKL 64

Query: 983  TKMGEDKKKAIEPDFKEGGQRNWVQVLANSGIASVLIVAIWVLTQGQDKCLNSKDSALIT 804
            TK+GEDKK+  + +FKEGGQRNW+QVLANSGIASVL++A+  L   +DKCL+ K+SA+IT
Sbjct: 65   TKVGEDKKRRFDAEFKEGGQRNWIQVLANSGIASVLVLAVGRLAGWEDKCLDGKESAVIT 124

Query: 803  SLIGGVIGHYSCCNGDTWSSEIGILSDERPRLITTFKPXXXXXXXXXXXXXXXXXXXXXX 624
            SLIGG+IG YSCCNGDTWSSE+G+LSD +PRLITTFKP                      
Sbjct: 125  SLIGGIIGQYSCCNGDTWSSELGVLSDAQPRLITTFKPVRRGANGGVTLAGLLAAAAAGG 184

Query: 623  XXXXSFVLLELSTIRCESVGVIKQLLAIPIATMAGLCGSIIDSLLGATLQFSGFCSIRQX 444
                +FVL+   T +C     +KQLL IP+A +AGLCGS+IDSLLGATLQFSGFC++R  
Sbjct: 185  VIGLAFVLIGFFTTKCVFDVALKQLLVIPVAALAGLCGSLIDSLLGATLQFSGFCTVRNK 244

Query: 443  XXXXXXXXXXKISGLSILDNNAVNXXXXXXXXXXXXLACLCIF 315
                      KISGL ILDNNAVN            + C  IF
Sbjct: 245  VVGKPGPTVRKISGLDILDNNAVNLVSILLTALLTSVGCAYIF 287


>ref|XP_002284876.1| PREDICTED: transmembrane protein 19 [Vitis vinifera]
            gi|297738884|emb|CBI28129.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  306 bits (783), Expect = 1e-80
 Identities = 156/281 (55%), Positives = 192/281 (68%)
 Frame = -3

Query: 1157 QPLVAVSVAFVIAFRAHRKKSLSTSGALVGFIVMALHIFVGYRFAAMLLAFFFTSSRLTK 978
            QP++A+  +  IA R+ R+KSL  SGA  GF V+ +H  VGYR+ AMLLAFF TSS+LTK
Sbjct: 7    QPIIAILFSAAIAIRSFRRKSLDLSGAFAGFAVLTIHFGVGYRYGAMLLAFFLTSSKLTK 66

Query: 977  MGEDKKKAIEPDFKEGGQRNWVQVLANSGIASVLIVAIWVLTQGQDKCLNSKDSALITSL 798
             GE+KK+ ++ DFKEGGQRNW QVL NSGI++VL + +W LT  QDKCL+SK+S+LITSL
Sbjct: 67   FGEEKKRLVDADFKEGGQRNWKQVLFNSGISAVLALILWRLTGWQDKCLDSKESSLITSL 126

Query: 797  IGGVIGHYSCCNGDTWSSEIGILSDERPRLITTFKPXXXXXXXXXXXXXXXXXXXXXXXX 618
            IGG+IGHYSCCNGDTWSSE+GILSD +PRLITTFKP                        
Sbjct: 127  IGGIIGHYSCCNGDTWSSELGILSDSQPRLITTFKPVRKGTNGGVTKTGLLAATAAGGVI 186

Query: 617  XXSFVLLELSTIRCESVGVIKQLLAIPIATMAGLCGSIIDSLLGATLQFSGFCSIRQXXX 438
              +FVL+   T +C S   +KQLL IP++ +AGLCGS+IDSLLGATLQ+SGFCS+R    
Sbjct: 187  GLTFVLIGFFTTKCASDVALKQLLVIPLSAVAGLCGSLIDSLLGATLQYSGFCSVRNKVV 246

Query: 437  XXXXXXXXKISGLSILDNNAVNXXXXXXXXXXXXLACLCIF 315
                    KISG+SILDNN VN            +ACL IF
Sbjct: 247  GKPGPTVRKISGISILDNNGVNLVSILLTSMLTSIACLYIF 287


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