BLASTX nr result
ID: Glycyrrhiza24_contig00004036
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00004036 (638 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003550207.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 123 3e-26 gb|AFK36327.1| unknown [Medicago truncatula] 119 5e-25 ref|XP_004142812.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1... 104 1e-20 ref|XP_002328810.1| predicted protein [Populus trichocarpa] gi|1... 103 3e-20 dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare] 100 4e-19 >ref|XP_003550207.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Glycine max] gi|255628585|gb|ACU14637.1| unknown [Glycine max] Length = 73 Score = 123 bits (308), Expect = 3e-26 Identities = 56/72 (77%), Positives = 63/72 (87%), Gaps = 3/72 (4%) Frame = -1 Query: 566 MGTGAGKHTGEFFRRRDAWRKHPMLGNQMRHATPGLGIALVAFGVYLVAEQAYNRINAPS 387 MG+G+GKHTGEFFRRRDAWRKHPML NQ+RHATPGLGIA+VAFG+YLV EQ YNR+ AP Sbjct: 1 MGSGSGKHTGEFFRRRDAWRKHPMLTNQLRHATPGLGIAVVAFGIYLVGEQVYNRLYAPD 60 Query: 386 SH---HVKAGEH 360 H HVKAG+H Sbjct: 61 PHSISHVKAGDH 72 >gb|AFK36327.1| unknown [Medicago truncatula] Length = 69 Score = 119 bits (298), Expect = 5e-25 Identities = 56/68 (82%), Positives = 61/68 (89%), Gaps = 2/68 (2%) Frame = -1 Query: 557 GAGKHTGEFFRRRDAWRKHPMLGNQMRHATPGLGIALVAFGVYLVAEQAYNRINAP--SS 384 GAGK+T EFF+RRD WRKHPMLGNQMRHATPGLGIALVAFGVYLVAEQ YN+IN+ S Sbjct: 2 GAGKNTAEFFKRRDEWRKHPMLGNQMRHATPGLGIALVAFGVYLVAEQVYNKINSSSHSH 61 Query: 383 HHVKAGEH 360 HHVKAG+H Sbjct: 62 HHVKAGDH 69 >ref|XP_004142812.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucumis sativus] Length = 74 Score = 104 bits (260), Expect = 1e-20 Identities = 47/55 (85%), Positives = 49/55 (89%) Frame = -1 Query: 542 TGEFFRRRDAWRKHPMLGNQMRHATPGLGIALVAFGVYLVAEQAYNRINAPSSHH 378 TGEFFRRRD WRKHPML NQ RHATPGLGIALVAFG+YLV EQ YNRIN+PSS H Sbjct: 9 TGEFFRRRDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSH 63 >ref|XP_002328810.1| predicted protein [Populus trichocarpa] gi|118484462|gb|ABK94107.1| unknown [Populus trichocarpa] gi|118487969|gb|ABK95806.1| unknown [Populus trichocarpa] gi|222839108|gb|EEE77459.1| predicted protein [Populus trichocarpa] Length = 68 Score = 103 bits (257), Expect = 3e-20 Identities = 51/69 (73%), Positives = 53/69 (76%) Frame = -1 Query: 566 MGTGAGKHTGEFFRRRDAWRKHPMLGNQMRHATPGLGIALVAFGVYLVAEQAYNRINAPS 387 MG G TGEFFRRRD WRKHPML NQ RHATPGLGIALVAFGVYLV EQ YN+I APS Sbjct: 1 MGKPLGS-TGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGVYLVGEQVYNKIYAPS 59 Query: 386 SHHVKAGEH 360 S H + H Sbjct: 60 SDHSSSHSH 68 >dbj|BAK07097.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 78 Score = 99.8 bits (247), Expect = 4e-19 Identities = 48/71 (67%), Positives = 56/71 (78%), Gaps = 4/71 (5%) Frame = -1 Query: 578 SAEEMGTGAG--KHTGEFFRRRDAWRKHPMLGNQMRHATPGLGIALVAFGVYLVAEQAYN 405 +AE M TG TGEFFRRRD WRKHPM+GNQ+RHATPGLGIA+VAFG+YLV E AYN Sbjct: 8 AAEAMATGGKGLNATGEFFRRRDEWRKHPMVGNQLRHATPGLGIAIVAFGIYLVGEAAYN 67 Query: 404 RINAPS--SHH 378 R+ P+ +HH Sbjct: 68 RLYRPAGDNHH 78