BLASTX nr result

ID: Glycyrrhiza24_contig00004033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00004033
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242564.1| uncharacterized protein LOC100801194 [Glycin...   390   e-106
ref|XP_003545992.1| PREDICTED: 40S ribosomal protein S6-like [Gl...   389   e-106
gb|ACU24470.1| unknown [Glycine max]                                  389   e-106
gb|ACU20345.1| unknown [Glycine max]                                  388   e-105
gb|AFK34739.1| unknown [Lotus japonicus]                              385   e-105

>ref|NP_001242564.1| uncharacterized protein LOC100801194 [Glycine max]
            gi|255630937|gb|ACU15831.1| unknown [Glycine max]
          Length = 249

 Score =  390 bits (1001), Expect = e-106
 Identities = 204/249 (81%), Positives = 209/249 (83%)
 Frame = -2

Query: 1014 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQG 835
            MKFNIANPTTGCQKKLEIDDD KLRAFWDKRISQEV GDALGEEF+GYVFKITGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVVGDALGEEFEGYVFKITGGCDKQG 60

Query: 834  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSPDLSVLNLVIVKKGE 655
            FPMKQGVLTPGRVRLLLHRGTPCF                GCIVSPDLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 654  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 475
            NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTK+GKKVSKAPKI
Sbjct: 121  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 474  QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKRRSKIS 295
            QRLVTPLTLQ                     EYQKLLASRLKEQR+RRSESLAKRRSK+S
Sbjct: 181  QRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLS 240

Query: 294  SVSKQAATA 268
            S +KQAATA
Sbjct: 241  SATKQAATA 249


>ref|XP_003545992.1| PREDICTED: 40S ribosomal protein S6-like [Glycine max]
          Length = 249

 Score =  389 bits (1000), Expect = e-106
 Identities = 204/249 (81%), Positives = 209/249 (83%)
 Frame = -2

Query: 1014 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQG 835
            MKFNIANPTTGCQKKLEIDDD KLRAFWDKRISQEV GDALGEEFKGYVFKITGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVVGDALGEEFKGYVFKITGGCDKQG 60

Query: 834  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSPDLSVLNLVIVKKGE 655
            FPMKQGVLTPGRVRLLLHRGTPCF                GCIVSPDLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 654  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 475
            +DLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTK+GKKVSKAPKI
Sbjct: 121  SDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 474  QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKRRSKIS 295
            QRLVTPLTLQ                     EYQKLLASRLKEQR+RRSESLAKRRSK+S
Sbjct: 181  QRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLS 240

Query: 294  SVSKQAATA 268
            S +KQAATA
Sbjct: 241  SAAKQAATA 249


>gb|ACU24470.1| unknown [Glycine max]
          Length = 249

 Score =  389 bits (1000), Expect = e-106
 Identities = 204/249 (81%), Positives = 209/249 (83%)
 Frame = -2

Query: 1014 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQG 835
            MKFNIANPTTGCQKKLEIDDD KLRAFWDKRISQEV GDALGEEFKGYVFKITGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVVGDALGEEFKGYVFKITGGCDKQG 60

Query: 834  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSPDLSVLNLVIVKKGE 655
            FPMKQGVLTPGRVRLLLHRGTPCF                GCIVSPDLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNRERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 654  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 475
            +DLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTK+GKKVSKAPKI
Sbjct: 121  SDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 474  QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKRRSKIS 295
            QRLVTPLTLQ                     EYQKLLASRLKEQR+RRSESLAKRRSK+S
Sbjct: 181  QRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLS 240

Query: 294  SVSKQAATA 268
            S +KQAATA
Sbjct: 241  SAAKQAATA 249


>gb|ACU20345.1| unknown [Glycine max]
          Length = 249

 Score =  388 bits (996), Expect = e-105
 Identities = 204/249 (81%), Positives = 208/249 (83%)
 Frame = -2

Query: 1014 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQG 835
            MKFNIANPTTGCQKKLEIDDD KLRAFWDKRISQEV GDALGEEFKGYVFKITGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVVGDALGEEFKGYVFKITGGCDKQG 60

Query: 834  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSPDLSVLNLVIVKKGE 655
            FPMKQGVLT GRVRLLLHRGTPCF                GCIVSPDLSVLNLVIVKKGE
Sbjct: 61   FPMKQGVLTRGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 654  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 475
            NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTK+GKKVSKAPKI
Sbjct: 121  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 474  QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKRRSKIS 295
            QRLVTPLTLQ                     EYQKLLASRLKEQR+RRSESLAKRRSK+S
Sbjct: 181  QRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLS 240

Query: 294  SVSKQAATA 268
            S +KQAATA
Sbjct: 241  SATKQAATA 249


>gb|AFK34739.1| unknown [Lotus japonicus]
          Length = 249

 Score =  385 bits (990), Expect = e-105
 Identities = 202/249 (81%), Positives = 207/249 (83%)
 Frame = -2

Query: 1014 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQG 835
            MKFNIANPTTGCQKKLEIDDD KLRAFWDKRISQEV GDALGEEFKGYVFKITGGCDKQG
Sbjct: 1    MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQG 60

Query: 834  FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXGCIVSPDLSVLNLVIVKKGE 655
            FPMKQGVLTPGRVRLLLHRGTPCF                GCIVSPDLSVLNLVIVKKG+
Sbjct: 61   FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 654  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 475
            NDLPGLTDVEKPRMRGPKRASKIRKLFNLSK+DDVRKYVNTYRRTFTTK+GKKVSKAPKI
Sbjct: 121  NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKAGKKVSKAPKI 180

Query: 474  QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXEYQKLLASRLKEQRERRSESLAKRRSKIS 295
            QRLVTPLTLQ                     EYQKLLASRLKEQRERRSESLAKRR K+S
Sbjct: 181  QRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRFKLS 240

Query: 294  SVSKQAATA 268
            S +K AATA
Sbjct: 241  SAAKPAATA 249


Top