BLASTX nr result
ID: Glycyrrhiza24_contig00003997
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00003997 (919 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [G... 88 3e-15 ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [G... 88 3e-15 dbj|BAJ95296.1| predicted protein [Hordeum vulgare subsp. vulgar... 63 1e-07 gb|ADN33944.1| cold-shock DNA-binding family protein [Cucumis me... 60 9e-07 ref|XP_004146143.1| PREDICTED: cold shock protein 1-like [Cucumi... 59 1e-06 >ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max] Length = 250 Score = 87.8 bits (216), Expect = 3e-15 Identities = 44/80 (55%), Positives = 45/80 (56%) Frame = +3 Query: 159 HMARDCATSKVXXXXXXXXXXCFRCGEVGHMARDCXXXXXXXXXXXXXXXXXXXXXXXKS 338 HMARDCAT K CFRCGEVGH+ARDC KS Sbjct: 175 HMARDCATGKGNIGGGSSGGGCFRCGEVGHLARDCGMEGGRYGDGGNSGGGGGG----KS 230 Query: 339 TCFNCGKPGHFARECVEASG 398 TCFNCGKPGHFARECVEASG Sbjct: 231 TCFNCGKPGHFARECVEASG 250 >ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max] Length = 252 Score = 87.8 bits (216), Expect = 3e-15 Identities = 44/80 (55%), Positives = 45/80 (56%) Frame = +3 Query: 159 HMARDCATSKVXXXXXXXXXXCFRCGEVGHMARDCXXXXXXXXXXXXXXXXXXXXXXXKS 338 HMARDCAT K CFRCGEVGH+ARDC KS Sbjct: 178 HMARDCATGKGNIGGGGSGGGCFRCGEVGHLARDCGMEGGRFGGGGGSGGGGG-----KS 232 Query: 339 TCFNCGKPGHFARECVEASG 398 TCFNCGKPGHFARECVEASG Sbjct: 233 TCFNCGKPGHFARECVEASG 252 >dbj|BAJ95296.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326507234|dbj|BAJ95694.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 264 Score = 62.8 bits (151), Expect = 1e-07 Identities = 29/80 (36%), Positives = 38/80 (47%) Frame = +3 Query: 159 HMARDCATSKVXXXXXXXXXXCFRCGEVGHMARDCXXXXXXXXXXXXXXXXXXXXXXXKS 338 HMARDC+ + C++CGE GH+ARDC Sbjct: 152 HMARDCSVNGAAGGGGGGGGGCYKCGEQGHIARDCFNGGAGGGGGGYGGGGGGG-----G 206 Query: 339 TCFNCGKPGHFARECVEASG 398 TC+NCG+PGH AR+C +SG Sbjct: 207 TCYNCGEPGHIARDCPTSSG 226 >gb|ADN33944.1| cold-shock DNA-binding family protein [Cucumis melo subsp. melo] Length = 272 Score = 59.7 bits (143), Expect = 9e-07 Identities = 32/80 (40%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Frame = +3 Query: 159 HMARDCATSKVXXXXXXXXXX-CFRCGEVGHMARDCXXXXXXXXXXXXXXXXXXXXXXXK 335 H+ARDC CF CGE GH+ARDC Sbjct: 195 HLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGRFGGGGGGG--S 252 Query: 336 STCFNCGKPGHFARECVEAS 395 +TCFNCGK GHFAREC +AS Sbjct: 253 NTCFNCGKSGHFARECPDAS 272 >ref|XP_004146143.1| PREDICTED: cold shock protein 1-like [Cucumis sativus] Length = 273 Score = 59.3 bits (142), Expect = 1e-06 Identities = 33/82 (40%), Positives = 36/82 (43%), Gaps = 3/82 (3%) Frame = +3 Query: 159 HMARDCATSKVXXXXXXXXXX--CFRCGEVGHMARDCXXXXXXXXXXXXXXXXXXXXXXX 332 H+ARDC CF CGE GH+ARDC Sbjct: 192 HLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGGRFGGGGGGGG 251 Query: 333 KS-TCFNCGKPGHFARECVEAS 395 S TCFNCGK GHFAREC +AS Sbjct: 252 GSNTCFNCGKSGHFARECPDAS 273