BLASTX nr result

ID: Glycyrrhiza24_contig00003957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003957
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607500.1| hypothetical protein MTR_4g078750 [Medicago ...   255   3e-66
ref|XP_003526264.1| PREDICTED: putative pentatricopeptide repeat...   245   3e-63
ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...   185   5e-45
emb|CBI28823.3| unnamed protein product [Vitis vinifera]              185   5e-45
ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   181   7e-44

>ref|XP_003607500.1| hypothetical protein MTR_4g078750 [Medicago truncatula]
           gi|355508555|gb|AES89697.1| hypothetical protein
           MTR_4g078750 [Medicago truncatula]
          Length = 470

 Score =  255 bits (652), Expect = 3e-66
 Identities = 123/170 (72%), Positives = 144/170 (84%)
 Frame = -3

Query: 524 KVLLLFTHMLANEAPPNTHTFPPLLKSTPPSLATPLHSQALRRGLFSDPFVLTTLLVLYA 345
           KV ++FT+MLAN   PNTHTFPPLLKS+   + TPLH QAL+RG+ SDPFVLTTLLV+YA
Sbjct: 71  KVFVIFTNMLANNVSPNTHTFPPLLKSSSAFVVTPLHCQALKRGILSDPFVLTTLLVVYA 130

Query: 344 RNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHRDVVSWTTMVNG 165
           R NH+  A KVFEE+P+FCIVA NAMINA ++NG+MEGA  +F  MP+RDVVSWTTMVNG
Sbjct: 131 RTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNG 190

Query: 164 FSLNGNFGAAVRFFGLMMTHEDVMDRLVKPNEATYVSVLSSCANLEGKKA 15
           F+L+GNFGAA+RFFG MM H+DV+D LVKPNEATYVSVLSSC  LEGK A
Sbjct: 191 FALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGA 240


>ref|XP_003526264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Glycine max]
          Length = 503

 Score =  245 bits (626), Expect = 3e-63
 Identities = 120/170 (70%), Positives = 138/170 (81%)
 Frame = -3

Query: 524 KVLLLFTHMLANEAPPNTHTFPPLLKSTPPSLATPLHSQALRRGLFSDPFVLTTLLVLYA 345
           K L +FTHMLAN+APPN+HTFPPLLK +P  L   LHSQ L+RGL SD F+LTTLL LYA
Sbjct: 103 KALSIFTHMLANQAPPNSHTFPPLLKISPLPLGATLHSQTLKRGLLSDGFILTTLLALYA 162

Query: 344 RNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHRDVVSWTTMVNG 165
           RN+ L HA  VFEE P+FCIVACNAMINA S+NGDME A +LF RMP RDV SWTT+V+G
Sbjct: 163 RNHLLPHARMVFEEFPMFCIVACNAMINAFSMNGDMEAAVALFERMPRRDVFSWTTVVDG 222

Query: 164 FSLNGNFGAAVRFFGLMMTHEDVMDRLVKPNEATYVSVLSSCANLEGKKA 15
           F+L GNFGA++RFF  MM H+DV+  LVKPNEAT  SVLSSCANL+GK A
Sbjct: 223 FALKGNFGASIRFFRNMMNHKDVVAGLVKPNEATCSSVLSSCANLDGKAA 272


>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Vitis vinifera]
          Length = 531

 Score =  185 bits (469), Expect = 5e-45
 Identities = 99/174 (56%), Positives = 123/174 (70%), Gaps = 7/174 (4%)
 Frame = -3

Query: 524 KVLLLFTHMLANEAPPNTHTFPPLLK---STPPSLA----TPLHSQALRRGLFSDPFVLT 366
           K LL+FTHMLA++APPN  TFP ++K   S  PSLA    TPLH+  ++RGL  D F+ T
Sbjct: 75  KTLLIFTHMLAHQAPPNNLTFPSIIKKAASCSPSLAFMIGTPLHTHVIKRGLSHDLFIQT 134

Query: 365 TLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHRDVVS 186
           +L+VLYAR   +  A +VFEEI   C+V+ NAM++AL  NGDM  A  LF  MP RDVVS
Sbjct: 135 SLVVLYARLCKVSDACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVS 194

Query: 185 WTTMVNGFSLNGNFGAAVRFFGLMMTHEDVMDRLVKPNEATYVSVLSSCANLEG 24
           WT+++NGF  N  F  A++FF  MM HEDV   LVKPNEAT+VSVLSSC NL+G
Sbjct: 195 WTSIINGFGRNRCFEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDG 248


>emb|CBI28823.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  185 bits (469), Expect = 5e-45
 Identities = 99/174 (56%), Positives = 123/174 (70%), Gaps = 7/174 (4%)
 Frame = -3

Query: 524 KVLLLFTHMLANEAPPNTHTFPPLLK---STPPSLA----TPLHSQALRRGLFSDPFVLT 366
           K LL+FTHMLA++APPN  TFP ++K   S  PSLA    TPLH+  ++RGL  D F+ T
Sbjct: 75  KTLLIFTHMLAHQAPPNNLTFPSIIKKAASCSPSLAFMIGTPLHTHVIKRGLSHDLFIQT 134

Query: 365 TLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHRDVVS 186
           +L+VLYAR   +  A +VFEEI   C+V+ NAM++AL  NGDM  A  LF  MP RDVVS
Sbjct: 135 SLVVLYARLCKVSDACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVS 194

Query: 185 WTTMVNGFSLNGNFGAAVRFFGLMMTHEDVMDRLVKPNEATYVSVLSSCANLEG 24
           WT+++NGF  N  F  A++FF  MM HEDV   LVKPNEAT+VSVLSSC NL+G
Sbjct: 195 WTSIINGFGRNRCFEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDG 248


>ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g10330-like [Vitis
           vinifera]
          Length = 454

 Score =  181 bits (459), Expect = 7e-44
 Identities = 98/174 (56%), Positives = 122/174 (70%), Gaps = 7/174 (4%)
 Frame = -3

Query: 524 KVLLLFTHMLANEAPPNTHTFPPLLK---STPPSLA----TPLHSQALRRGLFSDPFVLT 366
           K LL+FTHMLA++A PN  TFP ++K   S  PSLA    TPLH+  ++RGL+ D F+ T
Sbjct: 47  KTLLIFTHMLAHQARPNNLTFPSIIKKAASCLPSLAFMIGTPLHTHVIKRGLWHDLFIQT 106

Query: 365 TLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHRDVVS 186
           +L+VLYAR   +  A  VFEEI   C+V+ NAM++AL  NGDM  A  LF  MP RDVVS
Sbjct: 107 SLVVLYARLCKVSDACPVFEEISRPCVVSSNAMLDALGKNGDMGSALXLFESMPERDVVS 166

Query: 185 WTTMVNGFSLNGNFGAAVRFFGLMMTHEDVMDRLVKPNEATYVSVLSSCANLEG 24
           WT+++NGF  N  F  A++FF  MM HEDV   LVKPNEAT+VSVLSSC NL+G
Sbjct: 167 WTSIINGFGRNRCFEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDG 220


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