BLASTX nr result

ID: Glycyrrhiza24_contig00003929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003929
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   525   e-147
ref|XP_003520476.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   517   e-144
ref|XP_003624893.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   493   e-137
ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   420   e-115
emb|CBI38283.3| unnamed protein product [Vitis vinifera]              420   e-115

>ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine max]
          Length = 938

 Score =  525 bits (1352), Expect = e-147
 Identities = 260/303 (85%), Positives = 278/303 (91%)
 Frame = +3

Query: 153  MTEVSMCSSSNSELSPDEERIMIRDIGLSAQANSKEGDTFFMITQRWWQHWIEYVNQDQT 332
            MTEV MC +S SELSPDEERI+IRDI L+AQANSKEGDTFF+ITQRWWQHWIEYVNQ+QT
Sbjct: 1    MTEVPMCIASVSELSPDEERILIRDIALTAQANSKEGDTFFLITQRWWQHWIEYVNQEQT 60

Query: 333  NTSYDGSSFPEHCDLANSIALKRPAGIDNSDLIDNAASEDSSTSIDIHDTLLEGRDYVLL 512
            NTSYD SS  EHCDLANS  LKRPAGIDNSDLID+A SED+   I+IHDTLLEGRDYVLL
Sbjct: 61   NTSYDASSLSEHCDLANSSVLKRPAGIDNSDLIDDAVSEDTGMGIEIHDTLLEGRDYVLL 120

Query: 513  PQEVWNQLFTWYGGGPTLGRKVICSGLSQTELTVEVYPLRLQLLVLPKNDRSSIRISKKE 692
            PQEVWNQLF WYGGGPTL RKVI SGLSQTEL VEVYPLRLQLL+LPKNDR  IRISKKE
Sbjct: 121  PQEVWNQLFRWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLMLPKNDRFPIRISKKE 180

Query: 693  TIGQLHRKACEIFDLQLDQVRIWDYYARRKHALMNDMDKTLDDANLQMDQDILVEVLNNT 872
            TIGQLHRKACEIFDLQ DQV IWDYYARRKHALMNDMDKTLDDANLQMDQDILVEV+NNT
Sbjct: 181  TIGQLHRKACEIFDLQPDQVCIWDYYARRKHALMNDMDKTLDDANLQMDQDILVEVINNT 240

Query: 873  NSTSSAQENGSSQREGNFVLVEPSKSNISIAGGLSASKGASRGNNIELSSSQNLNSPVRD 1052
            N+TS AQENGS+QRE N  LVEPSKS++SIAGGLSAS+GASRG+N++LSSSQNLNSPVRD
Sbjct: 241  NNTSFAQENGSAQREMNSALVEPSKSSLSIAGGLSASRGASRGHNMDLSSSQNLNSPVRD 300

Query: 1053 VEN 1061
            VEN
Sbjct: 301  VEN 303


>ref|XP_003520476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine max]
          Length = 938

 Score =  517 bits (1332), Expect = e-144
 Identities = 258/303 (85%), Positives = 275/303 (90%)
 Frame = +3

Query: 153  MTEVSMCSSSNSELSPDEERIMIRDIGLSAQANSKEGDTFFMITQRWWQHWIEYVNQDQT 332
            MTEV MC +S SELSPDEERI+IRDI L++QANSKEGDTFF+ITQRWWQHWIEYVNQDQT
Sbjct: 1    MTEVLMCIASVSELSPDEERILIRDIALASQANSKEGDTFFLITQRWWQHWIEYVNQDQT 60

Query: 333  NTSYDGSSFPEHCDLANSIALKRPAGIDNSDLIDNAASEDSSTSIDIHDTLLEGRDYVLL 512
            NTSYD SS  E  DLANS ALKRPAGIDNSDLID+A  EDS T I+IHDTLLEGRDYVLL
Sbjct: 61   NTSYDASSLSEQFDLANSSALKRPAGIDNSDLIDDAVLEDSGTGIEIHDTLLEGRDYVLL 120

Query: 513  PQEVWNQLFTWYGGGPTLGRKVICSGLSQTELTVEVYPLRLQLLVLPKNDRSSIRISKKE 692
            PQEVWNQLF WYGGGPTL RKVI SGLSQTEL VEVYPLRLQLL+LPKNDR  IRISKKE
Sbjct: 121  PQEVWNQLFRWYGGGPTLARKVISSGLSQTELAVEVYPLRLQLLMLPKNDRFPIRISKKE 180

Query: 693  TIGQLHRKACEIFDLQLDQVRIWDYYARRKHALMNDMDKTLDDANLQMDQDILVEVLNNT 872
            TIGQLHRKACEIFDLQ DQV IWDYYARR+HALMNDMDKTLDDANLQMDQDILVEV+NNT
Sbjct: 181  TIGQLHRKACEIFDLQPDQVCIWDYYARRRHALMNDMDKTLDDANLQMDQDILVEVINNT 240

Query: 873  NSTSSAQENGSSQREGNFVLVEPSKSNISIAGGLSASKGASRGNNIELSSSQNLNSPVRD 1052
            N+TS AQENGS+QRE N  LVEPSKS++SIAGGLSAS+GAS+G N +LSSSQNLNSPVRD
Sbjct: 241  NNTSFAQENGSAQREANSALVEPSKSSLSIAGGLSASRGASKGYNTDLSSSQNLNSPVRD 300

Query: 1053 VEN 1061
            VEN
Sbjct: 301  VEN 303


>ref|XP_003624893.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355499908|gb|AES81111.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 912

 Score =  493 bits (1268), Expect = e-137
 Identities = 246/303 (81%), Positives = 264/303 (87%)
 Frame = +3

Query: 153  MTEVSMCSSSNSELSPDEERIMIRDIGLSAQANSKEGDTFFMITQRWWQHWIEYVNQDQT 332
            MTEVSMC  ++SELSPDEERIMIRDI LS+Q   KEGDTFF+ITQRWWQHWIEYVNQDQ 
Sbjct: 1    MTEVSMCYINSSELSPDEERIMIRDIALSSQTTPKEGDTFFIITQRWWQHWIEYVNQDQA 60

Query: 333  NTSYDGSSFPEHCDLANSIALKRPAGIDNSDLIDNAASEDSSTSIDIHDTLLEGRDYVLL 512
            N SYDGSSFPEH DL +S A+KRPAGIDN DLIDN  SEDSST I+IHDTLLEGRDYVLL
Sbjct: 61   NPSYDGSSFPEHSDLVSSSAIKRPAGIDNYDLIDNTGSEDSSTGIEIHDTLLEGRDYVLL 120

Query: 513  PQEVWNQLFTWYGGGPTLGRKVICSGLSQTELTVEVYPLRLQLLVLPKNDRSSIRISKKE 692
            P+EVW+QLF WYGGGPTL RKVI SGLSQTE  VEVYPLRLQLLVL +N RS+IRISKKE
Sbjct: 121  PREVWDQLFKWYGGGPTLERKVISSGLSQTEFAVEVYPLRLQLLVLTRNVRSTIRISKKE 180

Query: 693  TIGQLHRKACEIFDLQLDQVRIWDYYARRKHALMNDMDKTLDDANLQMDQDILVEVLNNT 872
            TIGQLH++ACEIFDL LDQVRIWDYY  RKHALMNDMDKTLDD NLQMDQDILVEV+NN 
Sbjct: 181  TIGQLHKRACEIFDLLLDQVRIWDYYGHRKHALMNDMDKTLDDVNLQMDQDILVEVVNN- 239

Query: 873  NSTSSAQENGSSQREGNFVLVEPSKSNISIAGGLSASKGASRGNNIELSSSQNLNSPVRD 1052
              TSSAQENGS  RE N VLVEP+KS++S AGGLS SKGASRGNN+E  SSQ LNSPVRD
Sbjct: 240  --TSSAQENGSVHREANSVLVEPTKSSVSTAGGLSTSKGASRGNNVEYYSSQKLNSPVRD 297

Query: 1053 VEN 1061
             EN
Sbjct: 298  SEN 300


>ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis
            vinifera]
          Length = 1056

 Score =  420 bits (1079), Expect = e-115
 Identities = 211/310 (68%), Positives = 256/310 (82%), Gaps = 7/310 (2%)
 Frame = +3

Query: 153  MTEVSMCSSSNSE-LSPDEERIMIRDIGLSAQANSKEGDTFFMITQRWWQHWIEYVNQDQ 329
            M E+SMCSSS+ E +SP+EER+ IRD  +SA+A++KEGDTF++ITQRWWQ W+EYVNQDQ
Sbjct: 1    MAEMSMCSSSSREQVSPEEERLAIRDFVISAEAHTKEGDTFYLITQRWWQQWLEYVNQDQ 60

Query: 330  TNTSYDGSSFPEHCDLANSIALKRPAGIDNSDLIDNAASEDSSTSIDIHDTLLEGRDYVL 509
             N + D SS  EHCD  +S  +KRP+ IDNSDLI +  SEDS+  I++HDTL+EGRDY+L
Sbjct: 61   AN-NIDVSSLSEHCDSVSSSDVKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYIL 119

Query: 510  LPQEVWNQLFTWYGGGPTLGRKVICSGLSQTELTVEVYPLRLQLLVLPKNDRSSIRISKK 689
            LPQEVWNQL+ WYGGGPTL RKVI SGLSQT L+VEVYPLRLQL+V+PK   S+IRISKK
Sbjct: 120  LPQEVWNQLYAWYGGGPTLPRKVINSGLSQTGLSVEVYPLRLQLVVVPKGAHSTIRISKK 179

Query: 690  ETIGQLHRKACEIFDLQLDQVRIWDYYARRKHALMNDMDKTLDDANLQMDQDILVEVLNN 869
            ETIG+LHR+ACEIFDL ++QV IWDYY  RKHALMNDMDKTLDDAN+Q DQD+LVEV +N
Sbjct: 180  ETIGELHRRACEIFDLNMEQVCIWDYYGHRKHALMNDMDKTLDDANIQTDQDVLVEVHSN 239

Query: 870  TNST------SSAQENGSSQREGNFVLVEPSKSNISIAGGLSASKGASRGNNIELSSSQN 1031
             +S+      SS QENGS+ +E   VLVEPSKS++SIAGGLSASKG SR  + ELS SQN
Sbjct: 240  GSSSAFGGCMSSVQENGSADKETMSVLVEPSKSSLSIAGGLSASKGVSRSCSSELSQSQN 299

Query: 1032 LNSPVRDVEN 1061
            L SPVR++++
Sbjct: 300  LTSPVRELDS 309


>emb|CBI38283.3| unnamed protein product [Vitis vinifera]
          Length = 955

 Score =  420 bits (1079), Expect = e-115
 Identities = 211/310 (68%), Positives = 256/310 (82%), Gaps = 7/310 (2%)
 Frame = +3

Query: 153  MTEVSMCSSSNSE-LSPDEERIMIRDIGLSAQANSKEGDTFFMITQRWWQHWIEYVNQDQ 329
            M E+SMCSSS+ E +SP+EER+ IRD  +SA+A++KEGDTF++ITQRWWQ W+EYVNQDQ
Sbjct: 1    MAEMSMCSSSSREQVSPEEERLAIRDFVISAEAHTKEGDTFYLITQRWWQQWLEYVNQDQ 60

Query: 330  TNTSYDGSSFPEHCDLANSIALKRPAGIDNSDLIDNAASEDSSTSIDIHDTLLEGRDYVL 509
             N + D SS  EHCD  +S  +KRP+ IDNSDLI +  SEDS+  I++HDTL+EGRDY+L
Sbjct: 61   AN-NIDVSSLSEHCDSVSSSDVKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYIL 119

Query: 510  LPQEVWNQLFTWYGGGPTLGRKVICSGLSQTELTVEVYPLRLQLLVLPKNDRSSIRISKK 689
            LPQEVWNQL+ WYGGGPTL RKVI SGLSQT L+VEVYPLRLQL+V+PK   S+IRISKK
Sbjct: 120  LPQEVWNQLYAWYGGGPTLPRKVINSGLSQTGLSVEVYPLRLQLVVVPKGAHSTIRISKK 179

Query: 690  ETIGQLHRKACEIFDLQLDQVRIWDYYARRKHALMNDMDKTLDDANLQMDQDILVEVLNN 869
            ETIG+LHR+ACEIFDL ++QV IWDYY  RKHALMNDMDKTLDDAN+Q DQD+LVEV +N
Sbjct: 180  ETIGELHRRACEIFDLNMEQVCIWDYYGHRKHALMNDMDKTLDDANIQTDQDVLVEVHSN 239

Query: 870  TNST------SSAQENGSSQREGNFVLVEPSKSNISIAGGLSASKGASRGNNIELSSSQN 1031
             +S+      SS QENGS+ +E   VLVEPSKS++SIAGGLSASKG SR  + ELS SQN
Sbjct: 240  GSSSAFGGCMSSVQENGSADKETMSVLVEPSKSSLSIAGGLSASKGVSRSCSSELSQSQN 299

Query: 1032 LNSPVRDVEN 1061
            L SPVR++++
Sbjct: 300  LTSPVRELDS 309


Top