BLASTX nr result

ID: Glycyrrhiza24_contig00003920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003920
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001078516.1| histone H3 [Arabidopsis thaliana] gi|3326617...   272   7e-71
gb|AFW86017.1| histone H3 [Zea mays]                                  268   1e-69
gb|AFW86016.1| histone H3 [Zea mays]                                  268   1e-69
tpg|DAA45649.1| TPA: histone H3 [Zea mays]                            268   2e-69
emb|CBI23573.3| unnamed protein product [Vitis vinifera]              266   5e-69

>ref|NP_001078516.1| histone H3 [Arabidopsis thaliana] gi|332661756|gb|AEE87156.1|
           histone H3 [Arabidopsis thaliana]
          Length = 164

 Score =  272 bits (696), Expect = 7e-71
 Identities = 142/157 (90%), Positives = 144/157 (91%)
 Frame = -3

Query: 870 PLSKTNLLRFLLLSESYRDSSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP 691
           P S    + F +LS S     MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP
Sbjct: 8   PRSDFTTIEFRVLSHSSLKIKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP 67

Query: 690 HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA 511
           HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA
Sbjct: 68  HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA 127

Query: 510 YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 400
           YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 128 YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 164


>gb|AFW86017.1| histone H3 [Zea mays]
          Length = 227

 Score =  268 bits (686), Expect = 1e-69
 Identities = 138/144 (95%), Positives = 139/144 (96%)
 Frame = -3

Query: 831 SESYRDSSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 652
           S S  +  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI
Sbjct: 84  SSSQGEEKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 143

Query: 651 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 472
           RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
Sbjct: 144 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 203

Query: 471 IHAKRVTIMPKDIQLARRIRGERA 400
           IHAKRVTIMPKDIQLARRIRGERA
Sbjct: 204 IHAKRVTIMPKDIQLARRIRGERA 227


>gb|AFW86016.1| histone H3 [Zea mays]
          Length = 247

 Score =  268 bits (686), Expect = 1e-69
 Identities = 138/144 (95%), Positives = 139/144 (96%)
 Frame = -3

Query: 831 SESYRDSSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 652
           S S  +  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI
Sbjct: 104 SSSQGEEKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 163

Query: 651 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 472
           RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA
Sbjct: 164 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 223

Query: 471 IHAKRVTIMPKDIQLARRIRGERA 400
           IHAKRVTIMPKDIQLARRIRGERA
Sbjct: 224 IHAKRVTIMPKDIQLARRIRGERA 247


>tpg|DAA45649.1| TPA: histone H3 [Zea mays]
          Length = 165

 Score =  268 bits (684), Expect = 2e-69
 Identities = 137/138 (99%), Positives = 138/138 (100%)
 Frame = -3

Query: 813 SSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 634
           +SMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 28  ASMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 87

Query: 633 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 454
           TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 88  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 147

Query: 453 TIMPKDIQLARRIRGERA 400
           TIMPKDIQLARRIRGERA
Sbjct: 148 TIMPKDIQLARRIRGERA 165


>emb|CBI23573.3| unnamed protein product [Vitis vinifera]
          Length = 147

 Score =  266 bits (680), Expect = 5e-69
 Identities = 136/139 (97%), Positives = 137/139 (98%)
 Frame = -3

Query: 816 DSSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 637
           +  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 9   EREMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 68

Query: 636 STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 457
           STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR
Sbjct: 69  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 128

Query: 456 VTIMPKDIQLARRIRGERA 400
           VTIMPKDIQLARRIRGERA
Sbjct: 129 VTIMPKDIQLARRIRGERA 147


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