BLASTX nr result

ID: Glycyrrhiza24_contig00003912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003912
         (1661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608619.1| AT-hook protein [Medicago truncatula] gi|355...   371   e-100
ref|XP_003524712.1| PREDICTED: putative DNA-binding protein ESCA...   358   2e-96
ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   329   1e-87
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   328   3e-87

>ref|XP_003608619.1| AT-hook protein [Medicago truncatula] gi|355509674|gb|AES90816.1|
            AT-hook protein [Medicago truncatula]
          Length = 334

 Score =  371 bits (953), Expect = e-100
 Identities = 218/348 (62%), Positives = 232/348 (66%), Gaps = 14/348 (4%)
 Frame = -1

Query: 1448 MDSRVPP--HTTMMAGPTSYAPTNXXXXXXXXXXXXXXXXXP---ARFPFAS--LEPFAA 1290
            MDSR  P    TMM GPTSYAPTN                     ARFPFAS   EPF+ 
Sbjct: 1    MDSRSAPPQQPTMMVGPTSYAPTNTTMISPNSSTTTTANIMAPATARFPFASPQSEPFSV 60

Query: 1289 AQHDGPTSPSALAKKKRGRPRKYSPDGNIALGLAPTHXXXXXXXXXXXXXXXXXXPKKHR 1110
              HDGP+SPS L KKKRGRPRKYSPDGNIALG                            
Sbjct: 61   T-HDGPSSPSTLGKKKRGRPRKYSPDGNIALGFGSCFFSCCCYVCCF------------- 106

Query: 1109 GRPPGSGKKQLDALGAGGVGFTPHVILVDSGEDIAAKIMAFSQQGPRTVCILSASGAICN 930
            GRPPGSGKKQLDALGAGG GFTPHVILV+SGEDI  K+MAFSQ GPRTVCILSA GAI +
Sbjct: 107  GRPPGSGKKQLDALGAGGTGFTPHVILVESGEDITEKVMAFSQTGPRTVCILSAIGAISS 166

Query: 929  VTLRQPALSGGTATYE-----GRFEIISLSGALKLSENNGEHSRTSSLCVSVAGSDGRVL 765
            V LRQPA SG  A YE     G+FEI+SLSG + LSENNGE SRTSSL VSVAG+DGRVL
Sbjct: 167  VILRQPA-SGSIARYEVQLVNGQFEIVSLSGPMPLSENNGEQSRTSSLYVSVAGADGRVL 225

Query: 764  GGGVAGMLTAASPVQVIVGSFIVDGKKSSLNMLKSGHSSAPASQMLTFGAXXXXXXXXXX 585
            GG VAG LTAAS VQVIVGSFIVD KKSS +M+KSG SSAP SQML FGA          
Sbjct: 226  GGAVAGELTAASTVQVIVGSFIVDRKKSSSSMVKSGPSSAPTSQMLNFGAPTTPTSPTSQ 285

Query: 584  XXXXXXSEDNDHGPFNNRGPGLYNNASQHVHN--MQMYHHPLWAGQTH 447
                  SE+NDH    +RGPGLYNNA+Q VHN   QMYHHPLWAGQTH
Sbjct: 286  GPSTESSEENDHNSNFSRGPGLYNNANQPVHNNMQQMYHHPLWAGQTH 333


>ref|XP_003524712.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 288

 Score =  358 bits (920), Expect = 2e-96
 Identities = 197/285 (69%), Positives = 210/285 (73%), Gaps = 13/285 (4%)
 Frame = -1

Query: 1259 ALAKKKRGRPRKYSPDGNIALGLAPTHXXXXXXXXXXXXXXXXXXP-------KKHRGRP 1101
            +LAKKKRGRPRKYSPDGNIAL LAPTH                          KKHRGRP
Sbjct: 5    SLAKKKRGRPRKYSPDGNIALRLAPTHASPPAAASGGGGGGDSAGMASADAPAKKHRGRP 64

Query: 1100 PGSGKKQLDALGAGGVGFTPHVILVDSGEDIAAKIMAFSQQGPRTVCILSASGAICNVTL 921
            PGSGKKQLDALGAGGVGFTPHVILV+SGEDI AKIMAFSQQGPRTVCILSA GAI NVTL
Sbjct: 65   PGSGKKQLDALGAGGVGFTPHVILVESGEDITAKIMAFSQQGPRTVCILSAIGAIGNVTL 124

Query: 920  RQPALSGGTATYEGRFEIISLSGALKLSENNGEHSRTSSLCVSVAGSDGRVLGGGVAGML 741
            +Q A++GG ATYEGRFEIISLSG+L+ SENN E SRT +L V++AGSDGRVLGGGVAG L
Sbjct: 125  QQSAMTGGIATYEGRFEIISLSGSLQQSENNSERSRTCTLNVTLAGSDGRVLGGGVAGTL 184

Query: 740  TAASPVQVIVGSFIVDGKKSSLNMLKSGHSSAPASQMLTFGAXXXXXXXXXXXXXXXXSE 561
             AAS VQVIVGSFI D KKSS N LKSG SSAP  QMLTFG+                SE
Sbjct: 185  IAASTVQVIVGSFIADAKKSSSNALKSGSSSAPPPQMLTFGSSMTPNSPTSQGPSTESSE 244

Query: 560  DNDHGPFNNRGP------GLYNNASQHVHNMQMYHHPLWAGQTHQ 444
            + DH PF  RGP      GLYNNASQ VHNM MYHHPLWAGQ+HQ
Sbjct: 245  EQDHSPF-CRGPGPGSGHGLYNNASQPVHNMPMYHHPLWAGQSHQ 288


>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
            gi|223540876|gb|EEF42434.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 376

 Score =  329 bits (844), Expect = 1e-87
 Identities = 185/300 (61%), Positives = 207/300 (69%), Gaps = 24/300 (8%)
 Frame = -1

Query: 1280 DGPTSPSAL--------AKKKRGRPRKYSPDGNIALGLAPT---------------HXXX 1170
            DG + PS+         AKKKRGRPRKY+PDGNIALGL+PT                   
Sbjct: 76   DGSSPPSSSGMRFSMDPAKKKRGRPRKYTPDGNIALGLSPTPISSSATSLPPHVADSGSG 135

Query: 1169 XXXXXXXXXXXXXXXPKKHRGRPPGSGKKQLDALGA-GGVGFTPHVILVDSGEDIAAKIM 993
                            K++RGRPPGSGKKQLDALG  GGVGFTPHVI V +GEDIA+KIM
Sbjct: 136  VGVGIGTPAIASDPPSKRNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIM 195

Query: 992  AFSQQGPRTVCILSASGAICNVTLRQPALSGGTATYEGRFEIISLSGALKLSENNGEHSR 813
            AFSQQGPRTVCILSA+GAICNVTLRQPA+SGGT TYEGR+EIISLSG+  LSENNG  SR
Sbjct: 196  AFSQQGPRTVCILSANGAICNVTLRQPAMSGGTVTYEGRYEIISLSGSFLLSENNGNRSR 255

Query: 812  TSSLCVSVAGSDGRVLGGGVAGMLTAASPVQVIVGSFIVDGKKSSLNMLKSGHSSAPASQ 633
            +  L VS+AGSDGRVLGGGVAGML AASPVQVIVGSFI DGKKS+ N+ KSG SSAP SQ
Sbjct: 256  SGGLSVSLAGSDGRVLGGGVAGMLMAASPVQVIVGSFIADGKKSNSNIHKSGPSSAPTSQ 315

Query: 632  MLTFGAXXXXXXXXXXXXXXXXSEDNDHGPFNNRGPGLYNNASQHVHNMQMYHHPLWAGQ 453
            ML FGA                S++N   P  NR P +Y+NA+Q +HNM MYH  LWA Q
Sbjct: 316  MLNFGAPMTTSSPPSQGVSSESSDENGSSPL-NRDPPIYSNATQPLHNMNMYHQ-LWAAQ 373


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
            predicted protein [Populus trichocarpa]
          Length = 375

 Score =  328 bits (842), Expect = 2e-87
 Identities = 192/345 (55%), Positives = 218/345 (63%), Gaps = 22/345 (6%)
 Frame = -1

Query: 1421 TMMAGPTSYAPTNXXXXXXXXXXXXXXXXXPARFPFASL-------EPFAAAQHDGPTSP 1263
            +M+  PTS  P+                     FPF ++       +P  A     PTS 
Sbjct: 31   SMILVPTSSYPSTTSHLINNPNISPQNAALGGGFPFNTMSGNRLQSKPEGAFDGSSPTSS 90

Query: 1262 SAL------AKKKRGRPRKYSPDGNIALGLAPTHXXXXXXXXXXXXXXXXXXP------- 1122
            S +      AKKKRGRPRKY+PDGNIALGL+PT                           
Sbjct: 91   SGMRFSIEPAKKKRGRPRKYTPDGNIALGLSPTPVPSGISAGHADSGGGGVTHDAASEHP 150

Query: 1121 -KKHRGRPPGSGKKQLDALGA-GGVGFTPHVILVDSGEDIAAKIMAFSQQGPRTVCILSA 948
             KK+RGRPPGSGKKQLDALG  GGVGFTPHVI V +GEDIA+KIMAFSQQGPRTVCILSA
Sbjct: 151  SKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSA 210

Query: 947  SGAICNVTLRQPALSGGTATYEGRFEIISLSGALKLSENNGEHSRTSSLCVSVAGSDGRV 768
            +GAICNVTLRQPA+SGG+ TYEGRFEIISLSG+  LSE+NG  SR+  L VS+AGSDGRV
Sbjct: 211  NGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRSGGLSVSLAGSDGRV 270

Query: 767  LGGGVAGMLTAASPVQVIVGSFIVDGKKSSLNMLKSGHSSAPASQMLTFGAXXXXXXXXX 588
            LGGGVAGMLTAASPVQVIVGSFI DGKKS+ +  KSG SS P  QML F A         
Sbjct: 271  LGGGVAGMLTAASPVQVIVGSFIADGKKSNSSASKSGPSSTPPPQMLNFSAPLTTASPPS 330

Query: 587  XXXXXXXSEDNDHGPFNNRGPGLYNNASQHVHNMQMYHHPLWAGQ 453
                   S++N   P  NR PG+Y N +Q +HNMQMY   LWA Q
Sbjct: 331  QGGSSDSSDENGGSPV-NRNPGIYGNPNQSIHNMQMYQ--LWADQ 372


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  328 bits (840), Expect = 3e-87
 Identities = 181/279 (64%), Positives = 197/279 (70%), Gaps = 12/279 (4%)
 Frame = -1

Query: 1253 AKKKRGRPRKYSPDGNIALGLAPT-----------HXXXXXXXXXXXXXXXXXXPKKHRG 1107
            AKKKRGRPRKY+PDGNIALGL+PT                               KKHRG
Sbjct: 8    AKKKRGRPRKYTPDGNIALGLSPTPIHSGMSAGQADSSGGAGSGVMPDVASEHPSKKHRG 67

Query: 1106 RPPGSGKKQLDALGA-GGVGFTPHVILVDSGEDIAAKIMAFSQQGPRTVCILSASGAICN 930
            RPPGSGKKQLDALG  GGVGFTPHVI V +GEDIA+KIMAFSQQGPRTVCILSA+GAICN
Sbjct: 68   RPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSANGAICN 127

Query: 929  VTLRQPALSGGTATYEGRFEIISLSGALKLSENNGEHSRTSSLCVSVAGSDGRVLGGGVA 750
            VTLRQPA+SGG+ TYEGRFEIISLSG+  LSE+NG  SRT  L VS+AGSDGRVLGGGVA
Sbjct: 128  VTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRTGGLSVSLAGSDGRVLGGGVA 187

Query: 749  GMLTAASPVQVIVGSFIVDGKKSSLNMLKSGHSSAPASQMLTFGAXXXXXXXXXXXXXXX 570
            GMLTAAS VQVI+GSFI DGKKS+   LKSG SS P  QML FGA               
Sbjct: 188  GMLTAASAVQVILGSFIADGKKSNSKSLKSGPSSTPPPQMLNFGAPLTTASPPSRGGSSE 247

Query: 569  XSEDNDHGPFNNRGPGLYNNASQHVHNMQMYHHPLWAGQ 453
             S++N   P  NR PG+Y N SQ +HNMQMY   LW GQ
Sbjct: 248  SSDENGGSPV-NRTPGIYGNPSQPIHNMQMYQ--LWGGQ 283


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