BLASTX nr result

ID: Glycyrrhiza24_contig00003895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003895
         (1433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12...   797   0.0  
ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12...   797   0.0  
ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12...   795   0.0  
ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12...   791   0.0  
gb|ACJ85096.1| unknown [Medicago truncatula] gi|388520005|gb|AFK...   780   0.0  

>ref|XP_003516844.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  797 bits (2059), Expect = 0.0
 Identities = 381/435 (87%), Positives = 407/435 (93%)
 Frame = -2

Query: 1351 MGEESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKINDDDY 1172
            M EESGE SARR+QVRFVTKL EP +VP TAIAIPADL RFGLSSLVNALLQS  ND D+
Sbjct: 3    MNEESGEGSARRVQVRFVTKLGEPYKVPTTAIAIPADLARFGLSSLVNALLQS--NDADH 60

Query: 1171 KPEPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVD 992
            +PEPFDFLIDGEF+RMSL+QFLLAKGISAERILEIEY R VAPRKEEDPSLHDDWVSAVD
Sbjct: 61   QPEPFDFLIDGEFVRMSLEQFLLAKGISAERILEIEYARAVAPRKEEDPSLHDDWVSAVD 120

Query: 991  GSSSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRT 812
            GSSSRFFLTGCYDGLGRVWKGAGLCTH+LEGHSDA+TSVSIINPKG ETVT+ATASKDRT
Sbjct: 121  GSSSRFFLTGCYDGLGRVWKGAGLCTHILEGHSDAITSVSIINPKGEETVTVATASKDRT 180

Query: 811  LRLWKINTNEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDF 632
            LRLWK+N  + +N+PMRVRA+KILRGHKSSVQ VA QT GEMVCS SWDCTINLWQTNDF
Sbjct: 181  LRLWKLNAGDHVNNPMRVRAYKILRGHKSSVQCVAVQTAGEMVCSASWDCTINLWQTNDF 240

Query: 631  NAEDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKW 452
            NAEDDLVSKKRK+  QVE+SQLEGEAFTTLVGHTQCVS+VVWPQRESIYSASWDHS+RKW
Sbjct: 241  NAEDDLVSKKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQRESIYSASWDHSIRKW 300

Query: 451  DVETGKNLSDIFCGKALNCLDIGGEGYALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHT 272
            DVETGKNL+D+FCGK LNCLDIGGEG  LIAAGGSDPV+RIWDPRKPG+SAPVFQF+SH 
Sbjct: 301  DVETGKNLTDLFCGKVLNCLDIGGEGSTLIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHM 360

Query: 271  SWISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLCADWWKSESVVSG 92
            SW+S+CKWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVL ADWWKS SV+SG
Sbjct: 361  SWVSACKWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISG 420

Query: 91   GADSKLCISSEIPVQ 47
            GADSKLCISSEIPVQ
Sbjct: 421  GADSKLCISSEIPVQ 435


>ref|XP_003524849.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 427

 Score =  797 bits (2058), Expect = 0.0
 Identities = 385/429 (89%), Positives = 406/429 (94%)
 Frame = -2

Query: 1333 EASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKINDDDYKPEPFD 1154
            E SARRIQVRFVTKL EP ++P TAIAIPADLTRFGLSSLVNALL+S  ND    PEPFD
Sbjct: 4    EGSARRIQVRFVTKLSEPYKIPTTAIAIPADLTRFGLSSLVNALLES--ND---APEPFD 58

Query: 1153 FLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVDGSSSRF 974
            FLIDGEFIRMSL+QFLLAKGISAERILE+EYTR VAPRKEEDPSLHDDWVSAVDGSSSRF
Sbjct: 59   FLIDGEFIRMSLEQFLLAKGISAERILEVEYTRAVAPRKEEDPSLHDDWVSAVDGSSSRF 118

Query: 973  FLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRTLRLWKI 794
            FLTGCYDGLGRVWKGAGLCTH+L+GHSDAVTSVSIINPKG ETVT+ATASKDRTLRLWK+
Sbjct: 119  FLTGCYDGLGRVWKGAGLCTHILDGHSDAVTSVSIINPKGAETVTVATASKDRTLRLWKL 178

Query: 793  NTNEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDFNAEDDL 614
            NT + +NHPMRVRA+KILRGHKSSVQSVA QT+GEMVCSGSWDCTINLWQTNDFNAEDD 
Sbjct: 179  NTEDPVNHPMRVRAYKILRGHKSSVQSVAVQTSGEMVCSGSWDCTINLWQTNDFNAEDDQ 238

Query: 613  VSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKWDVETGK 434
            VSKKRKV GQVE+SQLEGEAFTTLVGHTQCVSSVVWPQRE IYSASWDHS+RKWDVE GK
Sbjct: 239  VSKKRKVGGQVEESQLEGEAFTTLVGHTQCVSSVVWPQRELIYSASWDHSIRKWDVEIGK 298

Query: 433  NLSDIFCGKALNCLDIGGEGYALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHTSWISSC 254
            NL+DIFCGK LNCLDIGGEG ALIAAGGSDPVLRIWDPRKPG+SAPVFQFASHTSW+S+C
Sbjct: 299  NLTDIFCGKVLNCLDIGGEGSALIAAGGSDPVLRIWDPRKPGTSAPVFQFASHTSWVSAC 358

Query: 253  KWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLCADWWKSESVVSGGADSKL 74
            KWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVL ADWWKS+SV+SGGADSKL
Sbjct: 359  KWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSDSVISGGADSKL 418

Query: 73   CISSEIPVQ 47
            CISSEIPVQ
Sbjct: 419  CISSEIPVQ 427


>ref|XP_003543948.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  795 bits (2052), Expect = 0.0
 Identities = 379/435 (87%), Positives = 406/435 (93%)
 Frame = -2

Query: 1351 MGEESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKINDDDY 1172
            M EESGE SARR+QVRFVTKL EP +VP TAIAIPADL R GLSSLVNALLQS  ND D+
Sbjct: 3    MNEESGEGSARRVQVRFVTKLGEPYKVPTTAIAIPADLARLGLSSLVNALLQS--NDADH 60

Query: 1171 KPEPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVD 992
            +PEPFDFLIDGEF+RMSL+QFLLAKGISAERILEIEY R VAPRKEEDPSLHDDWVSAVD
Sbjct: 61   QPEPFDFLIDGEFVRMSLEQFLLAKGISAERILEIEYARAVAPRKEEDPSLHDDWVSAVD 120

Query: 991  GSSSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRT 812
            GSSSRFFLTGCYDGLGRVWKGAGLCTH+LEGHSDA+TS+SIINPKG ETVT+ATASKDRT
Sbjct: 121  GSSSRFFLTGCYDGLGRVWKGAGLCTHILEGHSDAITSISIINPKGEETVTVATASKDRT 180

Query: 811  LRLWKINTNEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDF 632
            LRLWK+N  + +N+PMRVRA+KILRGHKSSVQ VA QT GEMVCS SWDCTINLWQTNDF
Sbjct: 181  LRLWKLNAGDHVNNPMRVRAYKILRGHKSSVQCVAVQTAGEMVCSASWDCTINLWQTNDF 240

Query: 631  NAEDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKW 452
            NAEDDLVSKKRK+  QVE+SQLEGEAFTTLVGHTQCVS+VVWPQRESIYSASWDHS+RKW
Sbjct: 241  NAEDDLVSKKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQRESIYSASWDHSIRKW 300

Query: 451  DVETGKNLSDIFCGKALNCLDIGGEGYALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHT 272
            DVETGKNL+D+FCGK LNCLDIGGEG  LIAAGGSDPV+RIWDPRKPG+SAPVFQF+SH 
Sbjct: 301  DVETGKNLTDLFCGKVLNCLDIGGEGSTLIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHM 360

Query: 271  SWISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLCADWWKSESVVSG 92
            SW+S+CKWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVL ADWWKS SV+SG
Sbjct: 361  SWVSACKWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISG 420

Query: 91   GADSKLCISSEIPVQ 47
            GADSKLCISSEIPVQ
Sbjct: 421  GADSKLCISSEIPVQ 435


>ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  791 bits (2044), Expect = 0.0
 Identities = 381/435 (87%), Positives = 407/435 (93%)
 Frame = -2

Query: 1351 MGEESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKINDDDY 1172
            M EES E SARRIQVRFVTKL EP +VP TAIAIPADL RFGLSSLVNALLQS  ND D+
Sbjct: 3    MNEESVEGSARRIQVRFVTKLGEPYKVPTTAIAIPADLARFGLSSLVNALLQS--NDADH 60

Query: 1171 KPEPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVD 992
            + EPFDFLIDGEF+RMSL+QFLLAKGISAERILEIEYTR VAPRKEEDPSLHDDWVSAVD
Sbjct: 61   QLEPFDFLIDGEFVRMSLEQFLLAKGISAERILEIEYTRAVAPRKEEDPSLHDDWVSAVD 120

Query: 991  GSSSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRT 812
            GSSSRFFLTGCYDGLGRVWKGAGLCTH+LEGHSDAVTSVSIINPKG ET+T+ATASKDRT
Sbjct: 121  GSSSRFFLTGCYDGLGRVWKGAGLCTHILEGHSDAVTSVSIINPKGEETITVATASKDRT 180

Query: 811  LRLWKINTNEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDF 632
            LRLWK+N    +N+PMRVRA+KI RGHKSSV  VAAQT+GEMVCS SWDCTINLWQTNDF
Sbjct: 181  LRLWKLNAEGPVNNPMRVRAYKIFRGHKSSVNCVAAQTSGEMVCSASWDCTINLWQTNDF 240

Query: 631  NAEDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKW 452
            NAEDDLVSKKRK+  QVE+SQLEGEAFTTLVGHTQCVS+VVWPQ+ESIYSASWDHS+RKW
Sbjct: 241  NAEDDLVSKKRKIGAQVEESQLEGEAFTTLVGHTQCVSAVVWPQQESIYSASWDHSIRKW 300

Query: 451  DVETGKNLSDIFCGKALNCLDIGGEGYALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHT 272
            DVETGKNL+D+FCGK LNCLDIGGEG ALIAAGGSDPV+RIWDPRKPG+SAPVFQF+SHT
Sbjct: 301  DVETGKNLTDLFCGKVLNCLDIGGEGSALIAAGGSDPVIRIWDPRKPGTSAPVFQFSSHT 360

Query: 271  SWISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLCADWWKSESVVSG 92
            SWIS+CKWHD SWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVL ADWWKS SV+SG
Sbjct: 361  SWISACKWHDQSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLSADWWKSNSVISG 420

Query: 91   GADSKLCISSEIPVQ 47
            GADSKLCISSEIPV+
Sbjct: 421  GADSKLCISSEIPVK 435


>gb|ACJ85096.1| unknown [Medicago truncatula] gi|388520005|gb|AFK48064.1| unknown
            [Medicago truncatula]
          Length = 435

 Score =  780 bits (2014), Expect = 0.0
 Identities = 373/433 (86%), Positives = 404/433 (93%)
 Frame = -2

Query: 1345 EESGEASARRIQVRFVTKLDEPLRVPPTAIAIPADLTRFGLSSLVNALLQSKINDDDYKP 1166
            E++GE+S RRIQVRFVT L EP +VP +AIAIP DLTRFGLSSLVNALLQSK  D+D+K 
Sbjct: 5    EDNGESSTRRIQVRFVTSLPEPFKVPSSAIAIPVDLTRFGLSSLVNALLQSK--DEDHKS 62

Query: 1165 EPFDFLIDGEFIRMSLDQFLLAKGISAERILEIEYTRVVAPRKEEDPSLHDDWVSAVDGS 986
            EPFDFLIDGEF+RMSL+ FLLAKGISAERILEIEY R VAPRKEEDPSLHDDWVSAVDGS
Sbjct: 63   EPFDFLIDGEFVRMSLEDFLLAKGISAERILEIEYIRSVAPRKEEDPSLHDDWVSAVDGS 122

Query: 985  SSRFFLTGCYDGLGRVWKGAGLCTHMLEGHSDAVTSVSIINPKGVETVTLATASKDRTLR 806
            SSRF LTGCYDG GRVW+GAGLCTH+LEGHSD VTSVS+INP+GVETVTLATASKDRTLR
Sbjct: 123  SSRFILTGCYDGFGRVWEGAGLCTHILEGHSDGVTSVSVINPEGVETVTLATASKDRTLR 182

Query: 805  LWKINTNEAINHPMRVRAFKILRGHKSSVQSVAAQTNGEMVCSGSWDCTINLWQTNDFNA 626
            LWKINT EA NHP RVRA+KILRGHKSSVQSVAAQTNGEM+CSGSWDCTINLWQ ND NA
Sbjct: 183  LWKINTEEATNHPARVRAYKILRGHKSSVQSVAAQTNGEMICSGSWDCTINLWQINDTNA 242

Query: 625  EDDLVSKKRKVEGQVEDSQLEGEAFTTLVGHTQCVSSVVWPQRESIYSASWDHSVRKWDV 446
            E+DLVSKKRKV+G+VEDSQLEGEAFTTLVGHTQCVSSV+WPQRESIYSASWDHS+RKWDV
Sbjct: 243  ENDLVSKKRKVDGRVEDSQLEGEAFTTLVGHTQCVSSVIWPQRESIYSASWDHSIRKWDV 302

Query: 445  ETGKNLSDIFCGKALNCLDIGGEGYALIAAGGSDPVLRIWDPRKPGSSAPVFQFASHTSW 266
            E GKN++DIFCGKALNCLDIGGE  ALIA GGSDPV+RIWDPRKPG+SAPVFQFASHTSW
Sbjct: 303  EKGKNVTDIFCGKALNCLDIGGESSALIAVGGSDPVVRIWDPRKPGTSAPVFQFASHTSW 362

Query: 265  ISSCKWHDNSWFHLLSASYDGKVMLWDLRTAWPLSVIESHSDKVLCADWWKSESVVSGGA 86
            +++ KWHD S FHLLSASYDGKVMLWDLRTAWPLS IESHSDKV CADWWKS+SV+SGGA
Sbjct: 363  VTTVKWHDKSLFHLLSASYDGKVMLWDLRTAWPLSTIESHSDKVPCADWWKSDSVISGGA 422

Query: 85   DSKLCISSEIPVQ 47
            DSKLCISS+IP+Q
Sbjct: 423  DSKLCISSQIPLQ 435


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