BLASTX nr result

ID: Glycyrrhiza24_contig00003894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003894
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532102.1| PREDICTED: 50S ribosomal protein L14-like is...   280   5e-73
ref|XP_003610807.1| 50S ribosomal protein L14 [Medicago truncatu...   279   8e-73
gb|AFK37702.1| unknown [Medicago truncatula]                          278   2e-72
gb|AFK42595.1| unknown [Medicago truncatula]                          277   3e-72
ref|NP_001236853.1| uncharacterized protein LOC100527495 [Glycin...   274   3e-71

>ref|XP_003532102.1| PREDICTED: 50S ribosomal protein L14-like isoform 1 [Glycine max]
           gi|356527001|ref|XP_003532103.1| PREDICTED: 50S
           ribosomal protein L14-like isoform 2 [Glycine max]
           gi|356527003|ref|XP_003532104.1| PREDICTED: 50S
           ribosomal protein L14-like isoform 3 [Glycine max]
          Length = 166

 Score =  280 bits (715), Expect = 5e-73
 Identities = 144/166 (86%), Positives = 145/166 (87%)
 Frame = +2

Query: 170 MAASFASRFSRVGRSLFSGLSNSSPGLFTTSHEMTCSNYFSQQQRTFIQMRTVLKVVDNS 349
           MAA FASR SRVGRSLF GLSNSSPGLFTT HEMTC N FSQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAIFASRCSRVGRSLFGGLSNSSPGLFTTLHEMTCKNMFSQQQRTFIQMRTVLKVVDNS 60

Query: 350 GAKKVMCIQALKGKKGARLGDTIIASVKEAHPNXXXXXXXXXXXXXXRAAMPRGRCDGSE 529
           GAKKVMCIQALKGKKGARLGDTIIASVKEAHPN              RAAM +GRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 530 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 667
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 166


>ref|XP_003610807.1| 50S ribosomal protein L14 [Medicago truncatula]
           gi|357495181|ref|XP_003617879.1| 50S ribosomal protein
           L14 [Medicago truncatula] gi|355512142|gb|AES93765.1|
           50S ribosomal protein L14 [Medicago truncatula]
           gi|355519214|gb|AET00838.1| 50S ribosomal protein L14
           [Medicago truncatula] gi|388499684|gb|AFK37908.1|
           unknown [Medicago truncatula]
          Length = 166

 Score =  279 bits (713), Expect = 8e-73
 Identities = 142/166 (85%), Positives = 147/166 (88%)
 Frame = +2

Query: 170 MAASFASRFSRVGRSLFSGLSNSSPGLFTTSHEMTCSNYFSQQQRTFIQMRTVLKVVDNS 349
           MAA+FASR SRVGRSLF GLSNSSPGLFTTSHEMTC++YFSQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAATFASRCSRVGRSLFGGLSNSSPGLFTTSHEMTCNSYFSQQQRTFIQMRTVLKVVDNS 60

Query: 350 GAKKVMCIQALKGKKGARLGDTIIASVKEAHPNXXXXXXXXXXXXXXRAAMPRGRCDGSE 529
           GAKKVMCI+AL GKKGARLGD I ASVKEAHPN              RAAMP+GRCDGSE
Sbjct: 61  GAKKVMCIRALAGKKGARLGDMIQASVKEAHPNGKVKKGAVVFAVVVRAAMPKGRCDGSE 120

Query: 530 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 667
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 166


>gb|AFK37702.1| unknown [Medicago truncatula]
          Length = 166

 Score =  278 bits (710), Expect = 2e-72
 Identities = 141/166 (84%), Positives = 147/166 (88%)
 Frame = +2

Query: 170 MAASFASRFSRVGRSLFSGLSNSSPGLFTTSHEMTCSNYFSQQQRTFIQMRTVLKVVDNS 349
           MAA+FASR SRVGRSLF GLSN+SPGLFTTSHEMTC++YFSQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAATFASRCSRVGRSLFGGLSNNSPGLFTTSHEMTCNSYFSQQQRTFIQMRTVLKVVDNS 60

Query: 350 GAKKVMCIQALKGKKGARLGDTIIASVKEAHPNXXXXXXXXXXXXXXRAAMPRGRCDGSE 529
           GAKKVMCI+AL GKKGARLGD I ASVKEAHPN              RAAMP+GRCDGSE
Sbjct: 61  GAKKVMCIRALAGKKGARLGDMIQASVKEAHPNGKVKKGAVVFAVVVRAAMPKGRCDGSE 120

Query: 530 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 667
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 166


>gb|AFK42595.1| unknown [Medicago truncatula]
          Length = 166

 Score =  277 bits (708), Expect = 3e-72
 Identities = 141/166 (84%), Positives = 147/166 (88%)
 Frame = +2

Query: 170 MAASFASRFSRVGRSLFSGLSNSSPGLFTTSHEMTCSNYFSQQQRTFIQMRTVLKVVDNS 349
           MAA+FASR SRVGRSLF GLS+SSPGLFTTSHEMTC++YFSQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAATFASRCSRVGRSLFGGLSDSSPGLFTTSHEMTCNSYFSQQQRTFIQMRTVLKVVDNS 60

Query: 350 GAKKVMCIQALKGKKGARLGDTIIASVKEAHPNXXXXXXXXXXXXXXRAAMPRGRCDGSE 529
           GAKKVMCI+AL GKKGARLGD I ASVKEAHPN              RAAMP+GRCDGSE
Sbjct: 61  GAKKVMCIRALAGKKGARLGDMIQASVKEAHPNGKVKKGAVVFAVVVRAAMPKGRCDGSE 120

Query: 530 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 667
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 166


>ref|NP_001236853.1| uncharacterized protein LOC100527495 [Glycine max]
           gi|255632478|gb|ACU16589.1| unknown [Glycine max]
          Length = 166

 Score =  274 bits (700), Expect = 3e-71
 Identities = 141/166 (84%), Positives = 145/166 (87%)
 Frame = +2

Query: 170 MAASFASRFSRVGRSLFSGLSNSSPGLFTTSHEMTCSNYFSQQQRTFIQMRTVLKVVDNS 349
           MAA+FASR SRVGRSL  GLSNSSPGLFT+SH MTC+N FSQQQRTFIQMRTVLKVVDNS
Sbjct: 1   MAAAFASRCSRVGRSLSGGLSNSSPGLFTSSHGMTCNNLFSQQQRTFIQMRTVLKVVDNS 60

Query: 350 GAKKVMCIQALKGKKGARLGDTIIASVKEAHPNXXXXXXXXXXXXXXRAAMPRGRCDGSE 529
           GAKKVMCIQALKGKKGARLGDTIIASVKEAHPN              RAAM +GRCDGSE
Sbjct: 61  GAKKVMCIQALKGKKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSE 120

Query: 530 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 667
           VKFDDNAVVLVDKQGQPIGTRVFGPVPHEL QKKHVKILTLAGHIA
Sbjct: 121 VKFDDNAVVLVDKQGQPIGTRVFGPVPHELTQKKHVKILTLAGHIA 166


Top