BLASTX nr result

ID: Glycyrrhiza24_contig00003882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003882
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140575.1| PREDICTED: 60S ribosomal protein L23-like [C...   264   1e-68
gb|ABY56104.1| ribosomal protein [Cucumis sativus]                    264   1e-68
gb|AAK25758.1|AF334838_1 ribosomal protein L17 [Castanea sativa]...   264   1e-68
ref|XP_002301852.1| predicted protein [Populus trichocarpa] gi|2...   263   2e-68
gb|AAP80667.1|AF479048_1 ribosomal Pr 117, partial [Triticum aes...   263   2e-68

>ref|XP_004140575.1| PREDICTED: 60S ribosomal protein L23-like [Cucumis sativus]
           gi|449458864|ref|XP_004147166.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
           gi|449487355|ref|XP_004157585.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
           gi|449498587|ref|XP_004160577.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
           gi|449526191|ref|XP_004170097.1| PREDICTED: 60S
           ribosomal protein L23-like [Cucumis sativus]
          Length = 140

 Score =  264 bits (675), Expect = 1e-68
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -1

Query: 707 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 528
           SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG
Sbjct: 9   SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 68

Query: 527 KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 348
           KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL
Sbjct: 69  KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 128

Query: 347 WPRIASAANA 318
           WPRIASAANA
Sbjct: 129 WPRIASAANA 138


>gb|ABY56104.1| ribosomal protein [Cucumis sativus]
          Length = 161

 Score =  264 bits (675), Expect = 1e-68
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -1

Query: 707 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 528
           SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG
Sbjct: 30  SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 89

Query: 527 KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 348
           KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL
Sbjct: 90  KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 149

Query: 347 WPRIASAANA 318
           WPRIASAANA
Sbjct: 150 WPRIASAANA 159


>gb|AAK25758.1|AF334838_1 ribosomal protein L17 [Castanea sativa] gi|388492470|gb|AFK34301.1|
           unknown [Lotus japonicus]
          Length = 140

 Score =  264 bits (675), Expect = 1e-68
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = -1

Query: 707 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 528
           SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG
Sbjct: 9   SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 68

Query: 527 KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 348
           KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL
Sbjct: 69  KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 128

Query: 347 WPRIASAANA 318
           WPRIASAANA
Sbjct: 129 WPRIASAANA 138


>ref|XP_002301852.1| predicted protein [Populus trichocarpa]
           gi|224077606|ref|XP_002335793.1| predicted protein
           [Populus trichocarpa] gi|224102227|ref|XP_002312599.1|
           predicted protein [Populus trichocarpa]
           gi|224110634|ref|XP_002315585.1| predicted protein
           [Populus trichocarpa] gi|357137580|ref|XP_003570378.1|
           PREDICTED: 60S ribosomal protein L23-like [Brachypodium
           distachyon] gi|357146533|ref|XP_003574026.1| PREDICTED:
           60S ribosomal protein L23-like [Brachypodium distachyon]
           gi|315113254|pdb|3IZR|M Chain M, Localization Of The
           Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em
           Map Of Triticum Aestivum Translating 80s Ribosome
           gi|57471720|gb|AAW50991.1| ribosomal protein L17
           [Triticum aestivum] gi|76573329|gb|ABA46769.1| ribosomal
           protein L17-like protein [Solanum tuberosum]
           gi|118481489|gb|ABK92687.1| unknown [Populus
           trichocarpa] gi|118482141|gb|ABK93001.1| unknown
           [Populus trichocarpa] gi|118483249|gb|ABK93527.1|
           unknown [Populus trichocarpa]
           gi|118483257|gb|ABK93531.1| unknown [Populus
           trichocarpa] gi|118484402|gb|ABK94078.1| unknown
           [Populus trichocarpa] gi|118487170|gb|ABK95413.1|
           unknown [Populus trichocarpa]
           gi|222834818|gb|EEE73267.1| predicted protein [Populus
           trichocarpa] gi|222843578|gb|EEE81125.1| predicted
           protein [Populus trichocarpa]
           gi|222852419|gb|EEE89966.1| predicted protein [Populus
           trichocarpa] gi|222864625|gb|EEF01756.1| predicted
           protein [Populus trichocarpa]
           gi|326507922|dbj|BAJ86704.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 140

 Score =  263 bits (673), Expect = 2e-68
 Identities = 129/130 (99%), Positives = 130/130 (100%)
 Frame = -1

Query: 707 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 528
           SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG
Sbjct: 9   SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 68

Query: 527 KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 348
           KPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL
Sbjct: 69  KPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 128

Query: 347 WPRIASAANA 318
           WPRIASAANA
Sbjct: 129 WPRIASAANA 138


>gb|AAP80667.1|AF479048_1 ribosomal Pr 117, partial [Triticum aestivum]
          Length = 147

 Score =  263 bits (673), Expect = 2e-68
 Identities = 129/130 (99%), Positives = 130/130 (100%)
 Frame = -1

Query: 707 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 528
           SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG
Sbjct: 16  SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKG 75

Query: 527 KPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 348
           KPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL
Sbjct: 76  KPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 135

Query: 347 WPRIASAANA 318
           WPRIASAANA
Sbjct: 136 WPRIASAANA 145


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