BLASTX nr result

ID: Glycyrrhiza24_contig00003872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003872
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591500.1| hypothetical protein MTR_1g088250 [Medicago ...   244   2e-62
gb|AFK46856.1| unknown [Lotus japonicus]                              239   1e-60
ref|XP_003536086.1| PREDICTED: uncharacterized protein LOC100808...   234   2e-59
ref|XP_003519760.1| PREDICTED: uncharacterized protein LOC100804...   213   7e-53
ref|XP_002320336.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52

>ref|XP_003591500.1| hypothetical protein MTR_1g088250 [Medicago truncatula]
           gi|355480548|gb|AES61751.1| hypothetical protein
           MTR_1g088250 [Medicago truncatula]
           gi|388515423|gb|AFK45773.1| unknown [Medicago
           truncatula]
          Length = 162

 Score =  244 bits (623), Expect = 2e-62
 Identities = 121/162 (74%), Positives = 136/162 (83%), Gaps = 1/162 (0%)
 Frame = -2

Query: 922 MAGTAILVVFLLSVPLCATGAPTIYEALRAYNFPEGILPKGVTGYELDESSGKFRADLNG 743
           M     L++ L +  L  TG PT YEALR YNFP GILP GVT YELD+SSG FRADLN 
Sbjct: 1   MTSPVALLLLLTAAALTVTGTPTAYEALRTYNFPPGILPIGVTNYELDKSSGNFRADLNR 60

Query: 742 SCSFSLEGSYQLSYKSTITGHISENRLTDLRGVSVKVLFFWVNILEVVRTGDDLFFSVGV 563
           SCSFSL+GSYQLSYKSTITG I+ENRLTDLRG+SVKV+FFWVNILEVVR  D+L FSVGV
Sbjct: 61  SCSFSLQGSYQLSYKSTITGKITENRLTDLRGISVKVMFFWVNILEVVRKSDNLDFSVGV 120

Query: 562 ASASFPLDNFFVSPQCGCGLDCDPLRLRKIKLRS-NPSLSSA 440
           ASA+FPLD+FF SPQCGCGLDCDPLR+RK+KL + NPSLSS+
Sbjct: 121 ASAAFPLDDFFESPQCGCGLDCDPLRIRKLKLNTKNPSLSSS 162


>gb|AFK46856.1| unknown [Lotus japonicus]
          Length = 165

 Score =  239 bits (609), Expect = 1e-60
 Identities = 117/164 (71%), Positives = 136/164 (82%), Gaps = 4/164 (2%)
 Frame = -2

Query: 922 MAGTAILVVFLLSVPLCATG----APTIYEALRAYNFPEGILPKGVTGYELDESSGKFRA 755
           M    +L++ LLSVPL ++     AP+ YEAL  +NFP G+LPKGVT YELDES+GKFRA
Sbjct: 1   MMPATLLLLLLLSVPLLSSASSAAAPSAYEALAGFNFPAGLLPKGVTAYELDESTGKFRA 60

Query: 754 DLNGSCSFSLEGSYQLSYKSTITGHISENRLTDLRGVSVKVLFFWVNILEVVRTGDDLFF 575
           DLNGSCSF+LEGSYQLSY STITG IS+NRLTDLRG+SVK LFFW+NILEVVR+ D L F
Sbjct: 61  DLNGSCSFTLEGSYQLSYNSTITGRISDNRLTDLRGISVKALFFWLNILEVVRSSDQLDF 120

Query: 574 SVGVASASFPLDNFFVSPQCGCGLDCDPLRLRKIKLRSNPSLSS 443
           SVG++SASFPLD+FFVSP CGCGLDCD +R+RK K   NPSLSS
Sbjct: 121 SVGISSASFPLDSFFVSPMCGCGLDCDLIRIRKFKSDRNPSLSS 164


>ref|XP_003536086.1| PREDICTED: uncharacterized protein LOC100808207 [Glycine max]
          Length = 160

 Score =  234 bits (597), Expect = 2e-59
 Identities = 117/161 (72%), Positives = 135/161 (83%), Gaps = 1/161 (0%)
 Frame = -2

Query: 922 MAGTAILVVFLLSVPLCATGAPTIYEALRAYNFPEGILPKGVTGYELDESSGKFRADLNG 743
           M+ T  L++ LLS  + AT  PT YE L +++FP GILPKGVTGYELD SSGKF ADLNG
Sbjct: 1   MSITTFLLLLLLSPAITAT--PTAYEMLESFHFPAGILPKGVTGYELDPSSGKFSADLNG 58

Query: 742 SCSFSLEGSYQLSYKSTITGHISENRLTDLRGVSVKVLFFWVNILEVVRTGDDLFFSVGV 563
           SCSFSLEGSYQLSY+ TITG++SE RLT+LRG+SVK+LFFW+NIL+VVR G+DL FSVGV
Sbjct: 59  SCSFSLEGSYQLSYQKTITGYVSEGRLTELRGISVKILFFWLNILDVVRVGEDLDFSVGV 118

Query: 562 ASASFPLDNFFVSPQCGCGLDCDPLRLRKIKL-RSNPSLSS 443
           ASASFPLDNFFVSPQCGCGLDCD  R+RK+ L    PSLSS
Sbjct: 119 ASASFPLDNFFVSPQCGCGLDCDDFRIRKLDLGNRKPSLSS 159


>ref|XP_003519760.1| PREDICTED: uncharacterized protein LOC100804470 [Glycine max]
          Length = 183

 Score =  213 bits (541), Expect = 7e-53
 Identities = 104/137 (75%), Positives = 120/137 (87%), Gaps = 1/137 (0%)
 Frame = -2

Query: 850 YEALRAYNFPEGILPKGVTGYELDESSGKFRADLNGSCSFSLEGSYQLSYKSTITGHISE 671
           YE L +++FP GILPK VTGYELD SSGKF ADLNGSCSFSLEGSYQLSY+  IT ++S+
Sbjct: 46  YEMLESFHFPAGILPKRVTGYELDPSSGKFHADLNGSCSFSLEGSYQLSYQKIITVYVSD 105

Query: 670 NRLTDLRGVSVKVLFFWVNILEVVRTGDDLFFSVGVASASFPLDNFFVSPQCGCGLDCDP 491
            RLT+LRG+SVK+LFFW++IL+VVR GDDL FSVGVASASFPLDNFFVSPQCG GLDCD 
Sbjct: 106 GRLTELRGISVKILFFWLSILDVVRFGDDLDFSVGVASASFPLDNFFVSPQCGSGLDCDG 165

Query: 490 LRLRKIKLRS-NPSLSS 443
            R+RK+KLR+  PSLSS
Sbjct: 166 FRIRKLKLRNGKPSLSS 182


>ref|XP_002320336.1| predicted protein [Populus trichocarpa] gi|222861109|gb|EEE98651.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  211 bits (536), Expect = 3e-52
 Identities = 104/167 (62%), Positives = 132/167 (79%), Gaps = 7/167 (4%)
 Frame = -2

Query: 922 MAGTAILVVFLLSVPLCATGA-------PTIYEALRAYNFPEGILPKGVTGYELDESSGK 764
           M+ TAI  +FL+  PL  + +       PT+YE +  YNFP GILPKG TGY+LD+++G+
Sbjct: 1   MSFTAIFTLFLILSPLVTSSSLTITDNLPTVYEIIAGYNFPIGILPKGATGYKLDKTTGE 60

Query: 763 FRADLNGSCSFSLEGSYQLSYKSTITGHISENRLTDLRGVSVKVLFFWVNILEVVRTGDD 584
           F A LNGSCSFS+EGSYQL+YKSTI+G+IS+NRL  L GVSVKVLFFW+NI+EV+R GD+
Sbjct: 61  FGAFLNGSCSFSVEGSYQLNYKSTISGYISDNRLKSLSGVSVKVLFFWLNIVEVIRNGDE 120

Query: 583 LFFSVGVASASFPLDNFFVSPQCGCGLDCDPLRLRKIKLRSNPSLSS 443
           L FSVG+ASASFP+DNF+  PQCGCGL+C+ + L   KLRSNP +SS
Sbjct: 121 LDFSVGIASASFPIDNFYECPQCGCGLNCNNVEL-ATKLRSNPFVSS 166


Top