BLASTX nr result
ID: Glycyrrhiza24_contig00003860
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00003860
(2008 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003601683.1| Serine hydroxymethyltransferase [Medicago tr... 640 0.0
ref|NP_001239941.1| serine hydroxymethyltransferase 1-like [Glyc... 643 0.0
gb|AFK83582.1| serine hydroxymethyltransferase [Glycine max] gi|... 642 0.0
ref|XP_003629601.1| Serine hydroxymethyltransferase [Medicago tr... 648 0.0
ref|NP_001238321.1| serine hydroxymethyltransferase 2 [Glycine m... 637 0.0
>ref|XP_003601683.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|355490731|gb|AES71934.1| Serine
hydroxymethyltransferase [Medicago truncatula]
Length = 471
Score = 640 bits (1652), Expect(2) = 0.0
Identities = 322/398 (80%), Positives = 327/398 (82%)
Frame = -3
Query: 1832 MDPVSAWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVXXXXXXXXXXXXX 1653
MDPVS WGNTPL TVDPEIHDLIEKEKRRQCRGIELIASENFTSFAV
Sbjct: 1 MDPVSEWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
Query: 1652 XXXXXXXXXXXXXXXXXXXXXXXXGNRYYGGNEFIDQIENLCRSRALQAFHLDPTTWGVN 1473
GNRYYGGNEFIDQIEN+CRSRAL AFHLD TWGVN
Sbjct: 61 EGMP--------------------GNRYYGGNEFIDQIENICRSRALTAFHLDAATWGVN 100
Query: 1472 VQPYSGSPANFAAYTAVLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 1293
VQPYSGSPANFAAYTAVL PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK
Sbjct: 101 VQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160
Query: 1292 VNSATGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHIS 1113
VNS TG+IDYDRLEEKALDFRPKLIICGGSAYPRDWDY RFR VADKCGALLLCDMAHIS
Sbjct: 161 VNSTTGFIDYDRLEEKALDFRPKLIICGGSAYPRDWDYGRFRQVADKCGALLLCDMAHIS 220
Query: 1112 GLVAAQEANNPFEYCDIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXPENAVYDFEDKIN 933
GLVAAQEAN+PF +CDIVTTTTHKSLRGPRAGMIFYR PENAVYDFEDKIN
Sbjct: 221 GLVAAQEANDPFAFCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKIN 280
Query: 932 FAVFPSLQGGPHNHQIGALAVALKQAMMPGFXXXXXXXXXXXXALGNYLMSKGYSLVTGG 753
FAVFPSLQGGPHNHQIGALAVALKQA PGF ALGNYL+SKGYSLVTGG
Sbjct: 281 FAVFPSLQGGPHNHQIGALAVALKQATTPGFKAYAKQVKANAVALGNYLISKGYSLVTGG 340
Query: 752 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 639
TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG
Sbjct: 341 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 378
Score = 142 bits (358), Expect(2) = 0.0
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = -1
Query: 550 RGLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKAIEELKADVEKFSASF 371
RGLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKA+E+LKADVEKFSASF
Sbjct: 398 RGLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKALEDLKADVEKFSASF 457
Query: 370 DMPGFQVSEMKYKD 329
DMPGF VSE+KYKD
Sbjct: 458 DMPGFLVSELKYKD 471
>ref|NP_001239941.1| serine hydroxymethyltransferase 1-like [Glycine max]
gi|222142529|gb|ACM45951.1| serine
hydroxymethyltransferase 1 [Glycine max]
Length = 479
Score = 643 bits (1658), Expect(2) = 0.0
Identities = 323/398 (81%), Positives = 326/398 (81%)
Frame = -3
Query: 1832 MDPVSAWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVXXXXXXXXXXXXX 1653
MDPVS WGNTPLATVDPEIHDLIEKEK RQCRGIELIASENFTSFAV
Sbjct: 1 MDPVSVWGNTPLATVDPEIHDLIEKEKHRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
Query: 1652 XXXXXXXXXXXXXXXXXXXXXXXXGNRYYGGNEFIDQIENLCRSRALQAFHLDPTTWGVN 1473
GNRYYGGNEFIDQIENLCRSRALQAFHLD +WGVN
Sbjct: 61 EGMP--------------------GNRYYGGNEFIDQIENLCRSRALQAFHLDAQSWGVN 100
Query: 1472 VQPYSGSPANFAAYTAVLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 1293
VQPYSGSPANFAAYTAVL PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK
Sbjct: 101 VQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160
Query: 1292 VNSATGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHIS 1113
VNS TGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDY RFR +ADKCGALLLCDMAH S
Sbjct: 161 VNSTTGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYKRFREIADKCGALLLCDMAHTS 220
Query: 1112 GLVAAQEANNPFEYCDIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXPENAVYDFEDKIN 933
GLVAAQE N+PFEYCDIVTTTTHKSLRGPRAGMIFYR PENAVYDFEDKIN
Sbjct: 221 GLVAAQEVNSPFEYCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKIN 280
Query: 932 FAVFPSLQGGPHNHQIGALAVALKQAMMPGFXXXXXXXXXXXXALGNYLMSKGYSLVTGG 753
FAVFPSLQGGPHNHQIGALAVALKQA PGF ALGNYLM KGYSLVTGG
Sbjct: 281 FAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAVALGNYLMGKGYSLVTGG 340
Query: 752 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 639
TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG
Sbjct: 341 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 378
Score = 137 bits (346), Expect(2) = 0.0
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = -1
Query: 547 GLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKAIEELKADVEKFSASFD 368
GLVEKDFEQI EFLHRAVTLTLEIQKE+GKLLKDFNKGLVNNKAIE+LKADVEKFSA+FD
Sbjct: 407 GLVEKDFEQIGEFLHRAVTLTLEIQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSATFD 466
Query: 367 MPGFQVSEMKYKD 329
MPGF VSEMKYKD
Sbjct: 467 MPGFLVSEMKYKD 479
>gb|AFK83582.1| serine hydroxymethyltransferase [Glycine max]
gi|389548698|gb|AFK83587.1| serine
hydroxymethyltransferase [Glycine max]
Length = 471
Score = 642 bits (1655), Expect(2) = 0.0
Identities = 323/398 (81%), Positives = 326/398 (81%)
Frame = -3
Query: 1832 MDPVSAWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVXXXXXXXXXXXXX 1653
MDPVS WGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAV
Sbjct: 1 MDPVSVWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
Query: 1652 XXXXXXXXXXXXXXXXXXXXXXXXGNRYYGGNEFIDQIENLCRSRALQAFHLDPTTWGVN 1473
GNRYYGGNE+IDQIENLCRSRALQAFHLD +WGVN
Sbjct: 61 EGMP--------------------GNRYYGGNEYIDQIENLCRSRALQAFHLDAQSWGVN 100
Query: 1472 VQPYSGSPANFAAYTAVLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 1293
VQPYSGSPANFAAYTAVL PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK
Sbjct: 101 VQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160
Query: 1292 VNSATGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHIS 1113
VNS TGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDY RFR VADKCGALLLCDMAH S
Sbjct: 161 VNSTTGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYKRFREVADKCGALLLCDMAHTS 220
Query: 1112 GLVAAQEANNPFEYCDIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXPENAVYDFEDKIN 933
GLVAAQE N+PFEYCDIVTTTTHKSLRGPRAGMIFYR PENAVYDFEDKIN
Sbjct: 221 GLVAAQEVNSPFEYCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKIN 280
Query: 932 FAVFPSLQGGPHNHQIGALAVALKQAMMPGFXXXXXXXXXXXXALGNYLMSKGYSLVTGG 753
FAVFPSLQGGPHNHQIGALAVALKQA PGF ALG YLM KGYSLVTGG
Sbjct: 281 FAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAVALGKYLMGKGYSLVTGG 340
Query: 752 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 639
TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG
Sbjct: 341 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 378
Score = 138 bits (348), Expect(2) = 0.0
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = -1
Query: 550 RGLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKAIEELKADVEKFSASF 371
RGLVEKDFEQI EFLHRAVTLTLEIQKE+GKLLKDFNKGLVNNKAIE+LKADVEKFSA F
Sbjct: 398 RGLVEKDFEQIGEFLHRAVTLTLEIQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSALF 457
Query: 370 DMPGFQVSEMKYKD 329
DMPGF VSEMKYKD
Sbjct: 458 DMPGFLVSEMKYKD 471
>ref|XP_003629601.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|357518703|ref|XP_003629640.1| Serine
hydroxymethyltransferase [Medicago truncatula]
gi|355523623|gb|AET04077.1| Serine
hydroxymethyltransferase [Medicago truncatula]
gi|355523662|gb|AET04116.1| Serine
hydroxymethyltransferase [Medicago truncatula]
gi|388495742|gb|AFK35937.1| unknown [Medicago truncatula]
Length = 471
Score = 648 bits (1671), Expect(2) = 0.0
Identities = 324/398 (81%), Positives = 329/398 (82%)
Frame = -3
Query: 1832 MDPVSAWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVXXXXXXXXXXXXX 1653
MDPVS WGNTPL TVDPEIHDLIEKEKRRQCRGIELIASENFTSFAV
Sbjct: 1 MDPVSEWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
Query: 1652 XXXXXXXXXXXXXXXXXXXXXXXXGNRYYGGNEFIDQIENLCRSRALQAFHLDPTTWGVN 1473
GNRYYGGNEFIDQIENLCRSRALQAFH+DP +WGVN
Sbjct: 61 EGMP--------------------GNRYYGGNEFIDQIENLCRSRALQAFHIDPQSWGVN 100
Query: 1472 VQPYSGSPANFAAYTAVLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 1293
VQPYSGSPANFAAYTAVL PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK
Sbjct: 101 VQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160
Query: 1292 VNSATGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHIS 1113
VNS TG+IDYDRLEEKALDFRP+LIICGGSAYPRDWDY RFR VADKCGALLLCDMAH S
Sbjct: 161 VNSTTGFIDYDRLEEKALDFRPRLIICGGSAYPRDWDYKRFRDVADKCGALLLCDMAHFS 220
Query: 1112 GLVAAQEANNPFEYCDIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXPENAVYDFEDKIN 933
GLVAAQE NNPFEYCDIVTTTTHKSLRGPRAGMIFYR PENAVYDFEDKIN
Sbjct: 221 GLVAAQEVNNPFEYCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKIN 280
Query: 932 FAVFPSLQGGPHNHQIGALAVALKQAMMPGFXXXXXXXXXXXXALGNYLMSKGYSLVTGG 753
FAVFPSLQGGPHNHQIGALAVALKQAM PGF A+GNYLMSKGYSLVTGG
Sbjct: 281 FAVFPSLQGGPHNHQIGALAVALKQAMSPGFKAYAKQVKANAVAIGNYLMSKGYSLVTGG 340
Query: 752 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 639
TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG
Sbjct: 341 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 378
Score = 130 bits (326), Expect(2) = 0.0
Identities = 65/74 (87%), Positives = 69/74 (93%)
Frame = -1
Query: 550 RGLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKAIEELKADVEKFSASF 371
RGLVEKDFE+I EFLHRAVTLTLEIQKE+GKLLKDFNKGLV+NKAI ELKADVEKFS+ F
Sbjct: 398 RGLVEKDFEKIGEFLHRAVTLTLEIQKEHGKLLKDFNKGLVDNKAIAELKADVEKFSSLF 457
Query: 370 DMPGFQVSEMKYKD 329
MPGF VSEMKYKD
Sbjct: 458 GMPGFLVSEMKYKD 471
>ref|NP_001238321.1| serine hydroxymethyltransferase 2 [Glycine max]
gi|222142531|gb|ACM45952.1| serine
hydroxymethyltransferase 2 [Glycine max]
Length = 496
Score = 637 bits (1644), Expect(2) = 0.0
Identities = 321/398 (80%), Positives = 325/398 (81%)
Frame = -3
Query: 1832 MDPVSAWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVXXXXXXXXXXXXX 1653
M P+S WGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAV
Sbjct: 26 MLPISVWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 85
Query: 1652 XXXXXXXXXXXXXXXXXXXXXXXXGNRYYGGNEFIDQIENLCRSRALQAFHLDPTTWGVN 1473
GNRYYGGNE+IDQIENLCRSRALQAFHLD +WGVN
Sbjct: 86 EGMP--------------------GNRYYGGNEYIDQIENLCRSRALQAFHLDAQSWGVN 125
Query: 1472 VQPYSGSPANFAAYTAVLQPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 1293
VQPYSGSPANFAAYTAVL PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK
Sbjct: 126 VQPYSGSPANFAAYTAVLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 185
Query: 1292 VNSATGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHIS 1113
VNS TGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDY RFR VADKCGALLLCDMAH S
Sbjct: 186 VNSTTGYIDYDRLEEKALDFRPKLIICGGSAYPRDWDYKRFREVADKCGALLLCDMAHTS 245
Query: 1112 GLVAAQEANNPFEYCDIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXPENAVYDFEDKIN 933
GLVAAQE N+PFEYCDIVTTTTHKSLRGPRAGMIFYR PENAVYDFEDKIN
Sbjct: 246 GLVAAQEVNSPFEYCDIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKIN 305
Query: 932 FAVFPSLQGGPHNHQIGALAVALKQAMMPGFXXXXXXXXXXXXALGNYLMSKGYSLVTGG 753
FAVFPSLQGGPHNHQIGALAVALKQA PGF ALG YLM KGYSLVTGG
Sbjct: 306 FAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAVALGKYLMGKGYSLVTGG 365
Query: 752 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 639
TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG
Sbjct: 366 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 403
Score = 138 bits (348), Expect(2) = 0.0
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = -1
Query: 550 RGLVEKDFEQIAEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKAIEELKADVEKFSASF 371
RGLVEKDFEQI EFLHRAVTLTLEIQKE+GKLLKDFNKGLVNNKAIE+LKADVEKFSA F
Sbjct: 423 RGLVEKDFEQIGEFLHRAVTLTLEIQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSALF 482
Query: 370 DMPGFQVSEMKYKD 329
DMPGF VSEMKYKD
Sbjct: 483 DMPGFLVSEMKYKD 496