BLASTX nr result

ID: Glycyrrhiza24_contig00003858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003858
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549708.1| PREDICTED: 40S ribosomal protein S11-like [G...   147   1e-33
ref|NP_001236968.1| 40S ribosomal protein S11 [Glycine max] gi|1...   147   1e-33
gb|AFK49430.1| unknown [Lotus japonicus]                              146   2e-33
gb|AFK46727.1| unknown [Lotus japonicus]                              146   2e-33
ref|NP_001238157.1| uncharacterized protein LOC100500186 [Glycin...   146   2e-33

>ref|XP_003549708.1| PREDICTED: 40S ribosomal protein S11-like [Glycine max]
          Length = 159

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/89 (82%), Positives = 74/89 (83%)
 Frame = +1

Query: 112 MAEQTEKAFLKQPKVFLXXXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGTYIDKKCP 291
           MAEQTEKAFLKQPKVFL               NRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 292 FTGNVSIRGRILAGTCHSAKMNRTIIVRR 378
           FTGNVSIRGRILAGTCHSAKMNRTIIVRR
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRR 89


>ref|NP_001236968.1| 40S ribosomal protein S11 [Glycine max]
           gi|1173223|sp|P17093.2|RS11_SOYBN RecName: Full=40S
           ribosomal protein S11 gi|454848|gb|AAC14469.1| ribosomal
           protein S11 [Glycine max] gi|255625845|gb|ACU13267.1|
           unknown [Glycine max]
          Length = 159

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/89 (82%), Positives = 74/89 (83%)
 Frame = +1

Query: 112 MAEQTEKAFLKQPKVFLXXXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGTYIDKKCP 291
           MAEQTEKAFLKQPKVFL               NRFWKSIGLGFKTPR+AIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60

Query: 292 FTGNVSIRGRILAGTCHSAKMNRTIIVRR 378
           FTGNVSIRGRILAGTCHSAKMNRTIIVRR
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMNRTIIVRR 89


>gb|AFK49430.1| unknown [Lotus japonicus]
          Length = 159

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/89 (82%), Positives = 73/89 (82%)
 Frame = +1

Query: 112 MAEQTEKAFLKQPKVFLXXXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGTYIDKKCP 291
           MAEQTEKAFLKQPKVFL               NRFWKSIGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 292 FTGNVSIRGRILAGTCHSAKMNRTIIVRR 378
           FTGNVSIRGRILAGTCHSAKM RTIIVRR
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMTRTIIVRR 89


>gb|AFK46727.1| unknown [Lotus japonicus]
          Length = 151

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/89 (82%), Positives = 73/89 (82%)
 Frame = +1

Query: 112 MAEQTEKAFLKQPKVFLXXXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGTYIDKKCP 291
           MAEQTEKAFLKQPKVFL               NRFWKSIGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 292 FTGNVSIRGRILAGTCHSAKMNRTIIVRR 378
           FTGNVSIRGRILAGTCHSAKM RTIIVRR
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMTRTIIVRR 89


>ref|NP_001238157.1| uncharacterized protein LOC100500186 [Glycine max]
           gi|255629605|gb|ACU15150.1| unknown [Glycine max]
          Length = 159

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/89 (82%), Positives = 73/89 (82%)
 Frame = +1

Query: 112 MAEQTEKAFLKQPKVFLXXXXXXXXXXXXXXXNRFWKSIGLGFKTPRDAIEGTYIDKKCP 291
           MAEQTEKAFLKQPKVFL               NRFWKSIGLGFKTPRDAIEGTYIDKKCP
Sbjct: 1   MAEQTEKAFLKQPKVFLCSKKGGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCP 60

Query: 292 FTGNVSIRGRILAGTCHSAKMNRTIIVRR 378
           FTGNVSIRGRILAGTCHSAKM RTIIVRR
Sbjct: 61  FTGNVSIRGRILAGTCHSAKMTRTIIVRR 89


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