BLASTX nr result

ID: Glycyrrhiza24_contig00003743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003743
         (879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237454.1| uncharacterized protein LOC100527535 [Glycin...   218   1e-54
ref|NP_001236842.1| uncharacterized protein LOC100499847 [Glycin...   211   2e-52
gb|AFK47520.1| unknown [Lotus japonicus]                              209   7e-52
ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding prote...   178   1e-42
ref|XP_002304153.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42

>ref|NP_001237454.1| uncharacterized protein LOC100527535 [Glycine max]
           gi|255632562|gb|ACU16631.1| unknown [Glycine max]
          Length = 146

 Score =  218 bits (555), Expect = 1e-54
 Identities = 107/153 (69%), Positives = 110/153 (71%)
 Frame = -1

Query: 747 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVDYAAAXXXXXXXXXXXXXXXXXSDV 568
           MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRV                      SDV
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRV----VDFGGFGGRGGSSFGLTGSDV 56

Query: 567 RLGDWYCASANCGAHNFASRLSCFKCGAFKDDLSGGGYNNNMNSDILXXXXXXXXXXXXX 388
           R GDWYCA+ANCGAHNFASR SCFKCGAFKDDL+GGGYN   +SDIL             
Sbjct: 57  RPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGGYN---SSDILRSRAFGGSGRPGW 113

Query: 387 XXGDWICSRFGCNEHNFASRMECFKCSAPRDTY 289
             GDWICSR GCNEHNFASRMECFKCSAPRDTY
Sbjct: 114 KSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 146


>ref|NP_001236842.1| uncharacterized protein LOC100499847 [Glycine max]
           gi|255627109|gb|ACU13899.1| unknown [Glycine max]
          Length = 144

 Score =  211 bits (537), Expect = 2e-52
 Identities = 104/153 (67%), Positives = 110/153 (71%)
 Frame = -1

Query: 747 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVDYAAAXXXXXXXXXXXXXXXXXSDV 568
           MSRPGDWNCRSCQHLNFQRRDSCQRCGD+KYGDRVD+                    SDV
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDAKYGDRVDFGG-----FGGRGGSSFGLTGSDV 55

Query: 567 RLGDWYCASANCGAHNFASRLSCFKCGAFKDDLSGGGYNNNMNSDILXXXXXXXXXXXXX 388
           R GDWYCA+ANCGAHNFASR SCFKCGAFKDDL+ G YN   +SDIL             
Sbjct: 56  RPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLA-GSYN---SSDILRSRAFGGSGRPGW 111

Query: 387 XXGDWICSRFGCNEHNFASRMECFKCSAPRDTY 289
             GDWIC+R GCNEHNFASRMECFKCSAPRDTY
Sbjct: 112 KSGDWICTRSGCNEHNFASRMECFKCSAPRDTY 144


>gb|AFK47520.1| unknown [Lotus japonicus]
          Length = 150

 Score =  209 bits (532), Expect = 7e-52
 Identities = 105/156 (67%), Positives = 109/156 (69%), Gaps = 3/156 (1%)
 Frame = -1

Query: 747 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVDYAAAXXXXXXXXXXXXXXXXXSDV 568
           MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDR+D+ A                  SDV
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRIDFGA---FGGGIRGGSSFGLSGSDV 57

Query: 567 RLGDWYCASANCGAHNFASRLSCFKCGAFKDDLSGGGYNNNMNSDIL---XXXXXXXXXX 397
           R GDWYCA+ANCGAHNFASR SCFKCGAFKDDL GG      +SDIL             
Sbjct: 58  RPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLVGG-----FSSDILRSRGGFGGGGGGR 112

Query: 396 XXXXXGDWICSRFGCNEHNFASRMECFKCSAPRDTY 289
                GDWICSR GCNEHNFASRMECFKCSAPRDTY
Sbjct: 113 PGWKSGDWICSRSGCNEHNFASRMECFKCSAPRDTY 148


>ref|XP_002285376.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|297743402|emb|CBI36269.3| unnamed protein
           product [Vitis vinifera]
          Length = 150

 Score =  178 bits (452), Expect = 1e-42
 Identities = 91/158 (57%), Positives = 100/158 (63%)
 Frame = -1

Query: 747 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVDYAAAXXXXXXXXXXXXXXXXXSDV 568
           MSRPGDWNCRSCQH+NFQRRDSCQRCGD K G                         SDV
Sbjct: 1   MSRPGDWNCRSCQHMNFQRRDSCQRCGDPKSG------GGDFGSFGGRGGSSFGFTGSDV 54

Query: 567 RLGDWYCASANCGAHNFASRLSCFKCGAFKDDLSGGGYNNNMNSDILXXXXXXXXXXXXX 388
           R GDWYC + NCGAHNFASR +CFKCGAFKD+ S GGY+++M S                
Sbjct: 55  RPGDWYCNAGNCGAHNFASRSNCFKCGAFKDE-SAGGYDSDM-SRSRGFGFGGGSGRSGW 112

Query: 387 XXGDWICSRFGCNEHNFASRMECFKCSAPRDTY*K*DY 274
             GDWICSR GCNEHNFASRMECF+C+APRD   K  Y
Sbjct: 113 KSGDWICSRSGCNEHNFASRMECFRCNAPRDLSNKTSY 150


>ref|XP_002304153.1| predicted protein [Populus trichocarpa] gi|222841585|gb|EEE79132.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  177 bits (450), Expect = 2e-42
 Identities = 85/151 (56%), Positives = 98/151 (64%)
 Frame = -1

Query: 747 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRVDYAAAXXXXXXXXXXXXXXXXXSDV 568
           MSRPGDWNCRSCQHLNFQRRDSCQRCGD + G  +    A                 SDV
Sbjct: 1   MSRPGDWNCRSCQHLNFQRRDSCQRCGDPRTGGDLGGFGA-------RGGSAFGFTGSDV 53

Query: 567 RLGDWYCASANCGAHNFASRLSCFKCGAFKDDLSGGGYNNNMNSDILXXXXXXXXXXXXX 388
           R GDWYC + NCGAHNFASR SCFKCG +K+  S GG++++ +                 
Sbjct: 54  RPGDWYCTAGNCGAHNFASRSSCFKCGVYKEIDSSGGFDSDFSRSRGFGGSTGGSNRSGW 113

Query: 387 XXGDWICSRFGCNEHNFASRMECFKCSAPRD 295
             GDWIC+R+GCNEHNFASRMECFKC+APRD
Sbjct: 114 KSGDWICTRWGCNEHNFASRMECFKCNAPRD 144


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