BLASTX nr result

ID: Glycyrrhiza24_contig00003729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003729
         (1494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236943.1| microsomal omega-3 fatty acid desaturase [Gl...   701   0.0  
gb|ACD69578.1| omega-3 fatty acid desaturase [Glycine max]            699   0.0  
gb|AFK48902.1| unknown [Medicago truncatula]                          698   0.0  
gb|ACH43027.1| microsomal omega-3 fatty acid desaturase [Glycine...   695   0.0  
gb|AFK49580.1| unknown [Lotus japonicus]                              691   0.0  

>ref|NP_001236943.1| microsomal omega-3 fatty acid desaturase [Glycine max]
            gi|15430570|dbj|BAB18135.2| microsomal omega-3 fatty acid
            desaturase [Glycine max] gi|27902577|gb|AAO24265.1|
            microsomal omega-3-fatty acid desaturase [Glycine max]
            gi|157004279|gb|ABV00681.1| microsomal omega-3 fatty acid
            desaturase C [Glycine max] gi|188509991|gb|ACD56667.1|
            omega-3 fatty acid desaturase [Glycine max]
          Length = 380

 Score =  701 bits (1808), Expect = 0.0
 Identities = 318/365 (87%), Positives = 336/365 (92%)
 Frame = -2

Query: 1340 QQQTYFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVFIVTALVAAAINFNTWF 1161
            + Q YFDPSAPPPFKIA IRAAIPKHCW KN  RSLSYVLRDV +VTALVAAAI FN+WF
Sbjct: 17   EDQAYFDPSAPPPFKIANIRAAIPKHCWEKNTLRSLSYVLRDVLVVTALVAAAIGFNSWF 76

Query: 1160 FWLLYWPAQGTMFWALFVLGHDCGHGSFSNSPKLNSLVGHILHSSILVPYHGWRISHRTH 981
            FW LYWPAQGTMFWALFVLGHDCGHGSFSNSP LNS+VGHILHSSILVPYHGWRISHRTH
Sbjct: 77   FWPLYWPAQGTMFWALFVLGHDCGHGSFSNSPLLNSIVGHILHSSILVPYHGWRISHRTH 136

Query: 980  HQNHGHVEKDESWVPLTEKIYKNLDSMTRTMRFTFPFPIFAYPFYLWNRSPGKEGSHFNP 801
            HQNHGHVEKDESWVPLTEK+YKNLD+MTR MRFT PFPIFAYPFYLW+RSPGKEGSHFNP
Sbjct: 137  HQNHGHVEKDESWVPLTEKVYKNLDNMTRMMRFTLPFPIFAYPFYLWSRSPGKEGSHFNP 196

Query: 800  FSKLFPPSERRDVLTSTLCWGIMFCVLLYLSFIKGPIFMLKLYGVPYWIFVMWLDFVTYL 621
            +S LF P ERRDVLTSTLCWGIM  VLLYLS   GP+FMLKLYGVPY IFVMWLDFVTYL
Sbjct: 197  YSNLFSPGERRDVLTSTLCWGIMLSVLLYLSLTMGPLFMLKLYGVPYLIFVMWLDFVTYL 256

Query: 620  HHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQIPHYHLVE 441
            HHHGYKQKLPWYRG+EW YLRGGLTTVDRDYGW+NNIHHDIGTHVIHHLFPQIPHYHL+E
Sbjct: 257  HHHGYKQKLPWYRGQEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIE 316

Query: 440  ATRAAKPVLGKYYREPEKSGPVPLHLMKYFLRSISQDHFVSDSGDIVYYQTDPHLQLHTN 261
            AT+AAK VLGKYYREP+KSGP+PLHL+KY L SISQDHFVSDSGDIVYYQTD   QLH +
Sbjct: 317  ATKAAKAVLGKYYREPQKSGPLPLHLIKYLLHSISQDHFVSDSGDIVYYQTDS--QLHKD 374

Query: 260  SWTKS 246
            SWT+S
Sbjct: 375  SWTQS 379


>gb|ACD69578.1| omega-3 fatty acid desaturase [Glycine max]
          Length = 380

 Score =  699 bits (1804), Expect = 0.0
 Identities = 317/365 (86%), Positives = 335/365 (91%)
 Frame = -2

Query: 1340 QQQTYFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVFIVTALVAAAINFNTWF 1161
            + Q YFDPSAPPPFKIA IRAAIPKHCW KN  RSLSYVLRDV +VTALV AAI FN+WF
Sbjct: 17   EDQAYFDPSAPPPFKIANIRAAIPKHCWEKNTLRSLSYVLRDVLVVTALVTAAIGFNSWF 76

Query: 1160 FWLLYWPAQGTMFWALFVLGHDCGHGSFSNSPKLNSLVGHILHSSILVPYHGWRISHRTH 981
            FW LYWPAQGTMFWALFVLGHDCGHGSFSNSP LNS+VGHILHSSILVPYHGWRISHRTH
Sbjct: 77   FWPLYWPAQGTMFWALFVLGHDCGHGSFSNSPLLNSIVGHILHSSILVPYHGWRISHRTH 136

Query: 980  HQNHGHVEKDESWVPLTEKIYKNLDSMTRTMRFTFPFPIFAYPFYLWNRSPGKEGSHFNP 801
            HQNHGHVEKDESWVPLTEK+YKNLD+MTR MRFT PFPIFAYPFYLW+RSPGKEGSHFNP
Sbjct: 137  HQNHGHVEKDESWVPLTEKVYKNLDNMTRMMRFTLPFPIFAYPFYLWSRSPGKEGSHFNP 196

Query: 800  FSKLFPPSERRDVLTSTLCWGIMFCVLLYLSFIKGPIFMLKLYGVPYWIFVMWLDFVTYL 621
            +S LF P ERRDVLTSTLCWGIM  VLLYLS   GP+FMLKLYGVPY IFVMWLDFVTYL
Sbjct: 197  YSNLFSPGERRDVLTSTLCWGIMLSVLLYLSLTMGPLFMLKLYGVPYLIFVMWLDFVTYL 256

Query: 620  HHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQIPHYHLVE 441
            HHHGYKQKLPWYRG+EW YLRGGLTTVDRDYGW+NNIHHDIGTHVIHHLFPQIPHYHL+E
Sbjct: 257  HHHGYKQKLPWYRGQEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIE 316

Query: 440  ATRAAKPVLGKYYREPEKSGPVPLHLMKYFLRSISQDHFVSDSGDIVYYQTDPHLQLHTN 261
            AT+AAK VLGKYYREP+KSGP+PLHL+KY L SISQDHFVSDSGDIVYYQTD   QLH +
Sbjct: 317  ATKAAKAVLGKYYREPQKSGPLPLHLIKYLLHSISQDHFVSDSGDIVYYQTDS--QLHKD 374

Query: 260  SWTKS 246
            SWT+S
Sbjct: 375  SWTQS 379


>gb|AFK48902.1| unknown [Medicago truncatula]
          Length = 385

 Score =  698 bits (1802), Expect = 0.0
 Identities = 318/382 (83%), Positives = 339/382 (88%)
 Frame = -2

Query: 1388 LLHVXXXXXXXGKKHHQQQTYFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVF 1209
            L HV        KKH Q    FDPSAPPPFKIAEIRAAIPKHCWVKNP  SL YVLRD+F
Sbjct: 9    LQHVGNGDVVDAKKHQQN---FDPSAPPPFKIAEIRAAIPKHCWVKNPLISLGYVLRDLF 65

Query: 1208 IVTALVAAAINFNTWFFWLLYWPAQGTMFWALFVLGHDCGHGSFSNSPKLNSLVGHILHS 1029
            IV AL+AAAI+FN W FW +YW +QGTMFWALFVLGHDCGHGSFSNS  LNSLVGH LHS
Sbjct: 66   IVIALIAAAIHFNNWIFWPIYWISQGTMFWALFVLGHDCGHGSFSNSSLLNSLVGHFLHS 125

Query: 1028 SILVPYHGWRISHRTHHQNHGHVEKDESWVPLTEKIYKNLDSMTRTMRFTFPFPIFAYPF 849
            SILVPYHGWRISHRTHHQNHGHVEKDESWVPLTEK+YK+LD+MT+TMRFTFPFPIFAYPF
Sbjct: 126  SILVPYHGWRISHRTHHQNHGHVEKDESWVPLTEKMYKSLDNMTKTMRFTFPFPIFAYPF 185

Query: 848  YLWNRSPGKEGSHFNPFSKLFPPSERRDVLTSTLCWGIMFCVLLYLSFIKGPIFMLKLYG 669
            YLWNRSPGKEGSHFNP+SKLF PSER+DV+TST+CW IMFC+L YLS IKGPI MLKLYG
Sbjct: 186  YLWNRSPGKEGSHFNPYSKLFTPSERKDVITSTVCWSIMFCLLTYLSLIKGPIVMLKLYG 245

Query: 668  VPYWIFVMWLDFVTYLHHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNNIHHDIGTH 489
            VPYWIF+MWLDFVTY+HHHGY QKLPWYRG+EWDYLRGGLTTVDRDYGWVNNIHHDIGTH
Sbjct: 246  VPYWIFIMWLDFVTYMHHHGYSQKLPWYRGQEWDYLRGGLTTVDRDYGWVNNIHHDIGTH 305

Query: 488  VIHHLFPQIPHYHLVEATRAAKPVLGKYYREPEKSGPVPLHLMKYFLRSISQDHFVSDSG 309
            VIHH FPQIPHYHLVE T AAKPVLGKYYREPEKSGPVP HL KYFL S+S+DHFVSDSG
Sbjct: 306  VIHHFFPQIPHYHLVEGTEAAKPVLGKYYREPEKSGPVPPHLFKYFLHSMSRDHFVSDSG 365

Query: 308  DIVYYQTDPHLQLHTNSWTKSE 243
            DIV+YQ DP LQ   N+WTK E
Sbjct: 366  DIVFYQADPKLQ--NNTWTKFE 385


>gb|ACH43027.1| microsomal omega-3 fatty acid desaturase [Glycine max]
          Length = 380

 Score =  695 bits (1793), Expect = 0.0
 Identities = 316/365 (86%), Positives = 334/365 (91%)
 Frame = -2

Query: 1340 QQQTYFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVFIVTALVAAAINFNTWF 1161
            + Q Y DPSAPPPFKIA IRAAIPKHCW KN  RSLSYVLRDV +VTALVAAAI FN+WF
Sbjct: 17   EDQAYSDPSAPPPFKIANIRAAIPKHCWEKNTLRSLSYVLRDVLVVTALVAAAIGFNSWF 76

Query: 1160 FWLLYWPAQGTMFWALFVLGHDCGHGSFSNSPKLNSLVGHILHSSILVPYHGWRISHRTH 981
            FW LYWPAQGTMFWALF LGHDCGHGSFSNSP LNS+VGHILHSSILVPYHGWRISHRTH
Sbjct: 77   FWPLYWPAQGTMFWALFGLGHDCGHGSFSNSPLLNSIVGHILHSSILVPYHGWRISHRTH 136

Query: 980  HQNHGHVEKDESWVPLTEKIYKNLDSMTRTMRFTFPFPIFAYPFYLWNRSPGKEGSHFNP 801
            HQNHGHVEKDESWVPLTEK+YKNLD+MTR MRFT PFPIFAYPFYLW+RSPGKEGSHFNP
Sbjct: 137  HQNHGHVEKDESWVPLTEKVYKNLDNMTRMMRFTLPFPIFAYPFYLWSRSPGKEGSHFNP 196

Query: 800  FSKLFPPSERRDVLTSTLCWGIMFCVLLYLSFIKGPIFMLKLYGVPYWIFVMWLDFVTYL 621
            +S LF P ERRDVLTSTLCWGIM  VLLYLS   GP+FMLKLYGVPY IFVMWLDFVTYL
Sbjct: 197  YSNLFSPGERRDVLTSTLCWGIMLSVLLYLSLTMGPLFMLKLYGVPYLIFVMWLDFVTYL 256

Query: 620  HHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQIPHYHLVE 441
            HHHGYKQKLPWYRG+EW YLRGGLTTVDRDYGW+NNIHHDIGTHVIHHLFPQIPHYHL+E
Sbjct: 257  HHHGYKQKLPWYRGQEWSYLRGGLTTVDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIE 316

Query: 440  ATRAAKPVLGKYYREPEKSGPVPLHLMKYFLRSISQDHFVSDSGDIVYYQTDPHLQLHTN 261
            AT+AAK VLGKYYREP+KSGP+PLHL+KY L SISQDHFVSDSGDIVYYQTD   QLH +
Sbjct: 317  ATKAAKAVLGKYYREPQKSGPLPLHLIKYLLHSISQDHFVSDSGDIVYYQTDS--QLHKD 374

Query: 260  SWTKS 246
            SWT+S
Sbjct: 375  SWTQS 379


>gb|AFK49580.1| unknown [Lotus japonicus]
          Length = 386

 Score =  691 bits (1784), Expect = 0.0
 Identities = 311/356 (87%), Positives = 328/356 (92%)
 Frame = -2

Query: 1343 HQQQTYFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVFIVTALVAAAINFNTW 1164
            H  Q YFDPSAPPPFKI EIRAAIPKHCWVKNPWRSLSYVLRDV +VTAL AAA++FN W
Sbjct: 19   HHHQDYFDPSAPPPFKIGEIRAAIPKHCWVKNPWRSLSYVLRDVLVVTALGAAALHFNNW 78

Query: 1163 FFWLLYWPAQGTMFWALFVLGHDCGHGSFSNSPKLNSLVGHILHSSILVPYHGWRISHRT 984
             FW LYW AQGTMFWALFVLGHDCGHGSFS+S  LNS+VGHILHS ILVPYHGWRISHRT
Sbjct: 79   LFWPLYWAAQGTMFWALFVLGHDCGHGSFSDSLMLNSVVGHILHSFILVPYHGWRISHRT 138

Query: 983  HHQNHGHVEKDESWVPLTEKIYKNLDSMTRTMRFTFPFPIFAYPFYLWNRSPGKEGSHFN 804
            HHQNHGHVEKDESWVP+TEKIYKNLDS T+T+RF+FPFPIFAYPFYLWNRSPGKEGSHFN
Sbjct: 139  HHQNHGHVEKDESWVPMTEKIYKNLDSATKTLRFSFPFPIFAYPFYLWNRSPGKEGSHFN 198

Query: 803  PFSKLFPPSERRDVLTSTLCWGIMFCVLLYLSFIKGPIFMLKLYGVPYWIFVMWLDFVTY 624
            PFSKLF PS+RRDV TSTLCW IMFC LL LSFI GP FM  LYG+PY IFV+WLDFVTY
Sbjct: 199  PFSKLFTPSDRRDVFTSTLCWSIMFCALLCLSFIMGPSFMFMLYGIPYLIFVVWLDFVTY 258

Query: 623  LHHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQIPHYHLV 444
            LHHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQIPHYHLV
Sbjct: 259  LHHHGYKQKLPWYRGKEWDYLRGGLTTVDRDYGWVNNIHHDIGTHVIHHLFPQIPHYHLV 318

Query: 443  EATRAAKPVLGKYYREPEKSGPVPLHLMKYFLRSISQDHFVSDSGDIVYYQTDPHL 276
            EAT+AAKPVLGKYYREPEKSGP PLHL+KYF RSISQDHF S++GDIV+YQTDP L
Sbjct: 319  EATQAAKPVLGKYYREPEKSGPFPLHLIKYFQRSISQDHFASETGDIVFYQTDPLL 374


Top