BLASTX nr result

ID: Glycyrrhiza24_contig00003719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003719
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35180.1| unknown [Lotus japonicus]                              397   e-108
ref|XP_003618391.1| CCR4-NOT transcription complex subunit [Medi...   384   e-104
ref|XP_002281744.1| PREDICTED: uncharacterized protein LOC100261...   248   2e-63
emb|CBI35016.3| unnamed protein product [Vitis vinifera]              239   7e-61
ref|XP_002283833.1| PREDICTED: uncharacterized protein LOC100248...   202   1e-49

>gb|AFK35180.1| unknown [Lotus japonicus]
          Length = 322

 Score =  397 bits (1020), Expect = e-108
 Identities = 206/306 (67%), Positives = 227/306 (74%), Gaps = 5/306 (1%)
 Frame = -3

Query: 1022 SKKKRTNGSAKLKQIKLDVRREQWLSRVKKGCDVDSDGRVDHCPSSKLIASEENQSSSYK 843
            SKKKRTNGSAKLKQIKLDVRREQWLSRVKKGC+VDS+GR+D+CPSSK  ASEEN+SS  K
Sbjct: 12   SKKKRTNGSAKLKQIKLDVRREQWLSRVKKGCNVDSNGRMDNCPSSKHTASEENRSSC-K 70

Query: 842  ENRRKGGEGVEGTCIQGNDSSGSMIDRPDRIAYDYNEXXXXXXXXXXXXXXXXXXXXXXX 663
            E  RKG E +EGTCIQ +DS  S I+ PDR  Y ++E                       
Sbjct: 71   EMTRKG-EDIEGTCIQDSDSR-STINSPDRSTYSHDESSGKDFSGSSSNSISTSCSGNDS 128

Query: 662  XXXXXXGCLDDWEAVADALYANDNTHSVVSESPTEHEIQSSNAVPEAAKN----FSK-EF 498
                  GCLDDWEAVADALYAND +HSVVSESP EHE +    V E  KN    FSK +F
Sbjct: 129  EEEDDDGCLDDWEAVADALYANDKSHSVVSESPAEHEAECRYTVLEDDKNPRVDFSKADF 188

Query: 497  SSAVLKSHPNCQAWKADDSLRPTCLPNLSKKHGSPLSPNWCSNRKTVHWPWQTIISQPTQ 318
             S V +S PN +AWK DD+LRP CLPNLSK+  SPL+PNW  +RKTV W WQTII QP+Q
Sbjct: 189  KSEVPESKPNRRAWKPDDTLRPRCLPNLSKQRNSPLNPNWRGSRKTVPWAWQTIIPQPSQ 248

Query: 317  CPICYEDLDVTDSSFLPCSCGFRLCLFCHKKILEADGRCPGCRKLYDHVDGNVGFNIGAK 138
            CPICYEDLDVTDSSFLPCSCGF LCLFCHKKILEAD RCP CRKLYDHVDGNVG NIGAK
Sbjct: 249  CPICYEDLDVTDSSFLPCSCGFHLCLFCHKKILEADARCPSCRKLYDHVDGNVGLNIGAK 308

Query: 137  AFYVTQ 120
            AF +TQ
Sbjct: 309  AFCITQ 314


>ref|XP_003618391.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355493406|gb|AES74609.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 313

 Score =  384 bits (986), Expect = e-104
 Identities = 201/308 (65%), Positives = 226/308 (73%), Gaps = 1/308 (0%)
 Frame = -3

Query: 1040 SDHSLSSKKKRTNGSAKLKQIKLDVRREQWLSRVKKGCDVDSDGRVDHCPSSKLIASEEN 861
            SD   SSKKKRTNGSAKLKQIKLDVRREQWLSRVKKGCDVDS GRVD  PS+K IASEEN
Sbjct: 7    SDPPFSSKKKRTNGSAKLKQIKLDVRREQWLSRVKKGCDVDSTGRVDSYPSAKHIASEEN 66

Query: 860  QSSSYKENRRKGGEGVEGTCIQGNDSSGSMIDRPDRIAYDYNEXXXXXXXXXXXXXXXXX 681
            Q S YKE RRKG E  +GTCIQGNDS GS+I+   + +Y+++E                 
Sbjct: 67   QPS-YKEIRRKGRE--DGTCIQGNDS-GSIINNSIQSSYNHDESRNGFNGSRSSSTSAFS 122

Query: 680  XXXXXXXXXXXXGCLDDWEAVADALYANDNTHSVVSESPTEHEIQSSNAVPEAAKNFSK- 504
                         CLDDWEAVADAL AN N HS+VSESP EH I   ++   A K+FSK 
Sbjct: 123  SGNLTEEDG----CLDDWEAVADALNANSNEHSMVSESPIEHTINYVDS-EAAKKDFSKK 177

Query: 503  EFSSAVLKSHPNCQAWKADDSLRPTCLPNLSKKHGSPLSPNWCSNRKTVHWPWQTIISQP 324
            EFSSAV +SH +C+AWK DD+LRP CLP+LSK H S L+ NW  + K V W W+TI+SQP
Sbjct: 178  EFSSAVSESHMSCRAWKPDDALRPRCLPDLSKPHNSQLNSNWHGSHKIVPWSWRTIVSQP 237

Query: 323  TQCPICYEDLDVTDSSFLPCSCGFRLCLFCHKKILEADGRCPGCRKLYDHVDGNVGFNIG 144
            +QCPICYEDLDVTDS FLPCSCGF LCLFCHKKI+EADGRCPGCRKLYDHVDG VGFNI 
Sbjct: 238  SQCPICYEDLDVTDSEFLPCSCGFHLCLFCHKKIVEADGRCPGCRKLYDHVDGTVGFNIE 297

Query: 143  AKAFYVTQ 120
               FY+TQ
Sbjct: 298  TNDFYMTQ 305


>ref|XP_002281744.1| PREDICTED: uncharacterized protein LOC100261085 [Vitis vinifera]
          Length = 332

 Score =  248 bits (634), Expect = 2e-63
 Identities = 143/306 (46%), Positives = 179/306 (58%), Gaps = 7/306 (2%)
 Frame = -3

Query: 1022 SKKKRTNGSAKLKQIKLDVRREQWLSRVK-KGCDVDSDGRVDHCPSSKLIASEENQSSSY 846
            +KKKRTN SA+LKQ KLDVRREQWLS+VK KGC+VDS GR    PS   I   +N+    
Sbjct: 21   AKKKRTNRSARLKQSKLDVRREQWLSQVKNKGCEVDSSGRGGSPPSCMQIPHMQNRLVET 80

Query: 845  KENRRKGGEGVEGTCIQGNDSSGSMIDRPDRIAYDYNEXXXXXXXXXXXXXXXXXXXXXX 666
             E R +  E  + + I  +D   S+++ P   + D N                       
Sbjct: 81   SEMRSREEEN-DNSSIHDSDLE-SLLNSPVGSSLDSNASRKDHPRSSSSTSSDCCSRSLS 138

Query: 665  XXXXXXXGCLDDWEAVADALYANDNTHSVVSESPTEHEIQSSNAVPEAAKNFS------K 504
                    CLDDWEAVADAL  NDN  + +SE P + E +  +A  E  K  S       
Sbjct: 139  EEEEDDG-CLDDWEAVADALGINDNQQNPISEPPVKPEARIGSADTELPKRSSGVDLLKT 197

Query: 503  EFSSAVLKSHPNCQAWKADDSLRPTCLPNLSKKHGSPLSPNWCSNRKTVHWPWQTIISQP 324
            E    V  S  N +AW+ DD+LRP  LPNLSK+   P++     +R  + W W++ ISQP
Sbjct: 198  ESGGVVPISQMNSRAWRPDDALRPQSLPNLSKQCTFPMNSERHCHR-AIPWAWKSTISQP 256

Query: 323  TQCPICYEDLDVTDSSFLPCSCGFRLCLFCHKKILEADGRCPGCRKLYDHVDGNVGFNIG 144
            + CPIC EDLD+TDSSFLPC+CGFRLCLFCHK+ILEADGRCPGCRK YD + G+VGFN G
Sbjct: 257  SSCPICCEDLDLTDSSFLPCTCGFRLCLFCHKRILEADGRCPGCRKQYDPIHGDVGFNTG 316

Query: 143  AKAFYV 126
            A  F +
Sbjct: 317  ATPFKI 322


>emb|CBI35016.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  239 bits (611), Expect = 7e-61
 Identities = 140/300 (46%), Positives = 174/300 (58%), Gaps = 1/300 (0%)
 Frame = -3

Query: 1022 SKKKRTNGSAKLKQIKLDVRREQWLSRVK-KGCDVDSDGRVDHCPSSKLIASEENQSSSY 846
            +KKKRTN SA+LKQ KLDVRREQWLS+VK KGC+VDS GR    PS   I   +N+    
Sbjct: 21   AKKKRTNRSARLKQSKLDVRREQWLSQVKNKGCEVDSSGRGGSPPSCMQIPHMQNRLVET 80

Query: 845  KENRRKGGEGVEGTCIQGNDSSGSMIDRPDRIAYDYNEXXXXXXXXXXXXXXXXXXXXXX 666
             E R +  E  + + I  +D   S+++ P   + D N                       
Sbjct: 81   SEMRSREEEN-DNSSIHDSDLE-SLLNSPVGSSLDSNASRKDHPRSSSSTSSDCCSRSLS 138

Query: 665  XXXXXXXGCLDDWEAVADALYANDNTHSVVSESPTEHEIQSSNAVPEAAKNFSKEFSSAV 486
                    CLDDWEAVADAL  NDN  + +SE P +         PEA           V
Sbjct: 139  EEEEDDG-CLDDWEAVADALGINDNQQNPISEPPVK---------PEAR---------IV 179

Query: 485  LKSHPNCQAWKADDSLRPTCLPNLSKKHGSPLSPNWCSNRKTVHWPWQTIISQPTQCPIC 306
              S  N +AW+ DD+LRP  LPNLSK+   P++     +R  + W W++ ISQP+ CPIC
Sbjct: 180  PISQMNSRAWRPDDALRPQSLPNLSKQCTFPMNSERHCHR-AIPWAWKSTISQPSSCPIC 238

Query: 305  YEDLDVTDSSFLPCSCGFRLCLFCHKKILEADGRCPGCRKLYDHVDGNVGFNIGAKAFYV 126
             EDLD+TDSSFLPC+CGFRLCLFCHK+ILEADGRCPGCRK YD + G+VGFN GA  F +
Sbjct: 239  CEDLDLTDSSFLPCTCGFRLCLFCHKRILEADGRCPGCRKQYDPIHGDVGFNTGATPFKI 298


>ref|XP_002283833.1| PREDICTED: uncharacterized protein LOC100248510 [Vitis vinifera]
          Length = 348

 Score =  202 bits (514), Expect = 1e-49
 Identities = 124/302 (41%), Positives = 154/302 (50%), Gaps = 21/302 (6%)
 Frame = -3

Query: 1019 KKKRTNGSAKLKQIKLDVRREQWLSRVKK-GCDVDSDGRVDHCPSSKLIASEENQSSSYK 843
            KKKRTN +AKLKQ KLD RREQWLS+VK  GC  +S+G  +     +  ++E N+S    
Sbjct: 19   KKKRTNRTAKLKQCKLDARREQWLSKVKNNGCRGESEGIPESSMHKRNESNESNRSLENL 78

Query: 842  ENRRKGGEGVEGTCIQGNDSSGSMIDRPDRIAY------DYNEXXXXXXXXXXXXXXXXX 681
            E R +GGE  +G+    +DS          I+                            
Sbjct: 79   EVRPRGGEN-DGSVHHDSDSESPANSPTSHISSILGSTDSGTNYHASSSSSSSSGGCCSG 137

Query: 680  XXXXXXXXXXXXGCLDDWEAVADALYANDNTHSVVSESPTEHE-------IQSSNAVPEA 522
                         CLDDWEAVADAL A D     V E   E E       +  S +    
Sbjct: 138  SITEEEEEEGNDECLDDWEAVADALAAVDKQKIPVQEGHVEQESHVEQKPVVRSGSPGGI 197

Query: 521  AKN-------FSKEFSSAVLKSHPNCQAWKADDSLRPTCLPNLSKKHGSPLSPNWCSNRK 363
            +K+          E    V ++  N QAW+ADD+ RP  LPNLSK+H  P++ +      
Sbjct: 198  SKDTGLGIEIHKPEHVGMVPRAPANGQAWRADDAFRPQSLPNLSKQHSFPMNSDRHYGHG 257

Query: 362  TVHWPWQTIISQPTQCPICYEDLDVTDSSFLPCSCGFRLCLFCHKKILEADGRCPGCRKL 183
             V W   ++ + P  CPICYEDLD TDSSFLPCSCGFRLCLFCHK+ILE DGRCPGCRK 
Sbjct: 258  GVPWARSSVAAIPISCPICYEDLDFTDSSFLPCSCGFRLCLFCHKRILEEDGRCPGCRKP 317

Query: 182  YD 177
            YD
Sbjct: 318  YD 319


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