BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003679
         (1756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containi...   714   0.0  
ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containi...   714   0.0  
ref|XP_003618770.1| Pentatricopeptide repeat-containing protein ...   687   0.0  
ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...   628   e-177
ref|XP_004141120.1| PREDICTED: pentatricopeptide repeat-containi...   593   e-167

>ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Glycine max]
          Length = 450

 Score =  714 bits (1844), Expect = 0.0
 Identities = 344/448 (76%), Positives = 396/448 (88%)
 Frame = +3

Query: 3    FLQSLLAKTRFAGRVGSPCGVSGLRFFAASTEEYSKRNYANNVSEYNTVVGSLSAQRRNF 182
            FLQSL+A++R+A R GS   VSGLRFF+ STEEYSKRNYANNV+EYNTV+GSL+AQRRNF
Sbjct: 3    FLQSLIAQSRYAARAGSLNRVSGLRFFSVSTEEYSKRNYANNVAEYNTVLGSLTAQRRNF 62

Query: 183  LLRDVYDDMMLDGVKPNRDIFHSLVVGTMRGSRMQDAFFFMDQMKIMGMLPDVTLYNFLI 362
            LLRDVYDDMMLDGVKP RD FHSL VGTM+ +RMQDAF+F DQMKIMG+LPDVTLYNFLI
Sbjct: 63   LLRDVYDDMMLDGVKPTRDTFHSLAVGTMKAARMQDAFYFADQMKIMGLLPDVTLYNFLI 122

Query: 363  STCGKCKNSDQAIQILEEMKCMEVKPNVQTYICLLHACAAQGRIDRVYAIVRDMTAAGLG 542
            STCGKCKNS++AIQILEEMKCMEVKPN+QTYICLL+ACAA GRIDRVYAIVRDMTAAGLG
Sbjct: 123  STCGKCKNSNKAIQILEEMKCMEVKPNIQTYICLLNACAADGRIDRVYAIVRDMTAAGLG 182

Query: 543  LNKFCYAGLIVAHKNKTPVTDDFGEKVIEFVERSKIWXXXXXXXXXXXXXMIGVSDEELY 722
            LN+FCYAGLIVAHKNKTP+ DDF  KVIEFVERSK+W             M+GVSDEELY
Sbjct: 183  LNEFCYAGLIVAHKNKTPLPDDFAAKVIEFVERSKMWSSVETNSANAENVMMGVSDEELY 242

Query: 723  NLPTAEYVNRRGGFLNRSFTAYHTAFNAAADLKNVGLTETLLEMLSREGKTPDVYIMMQV 902
            +LPTAEY +RRGGF+ R FTAYHTAF+AAADLKNV LT+TLLEML+++GKTPD++I+MQV
Sbjct: 243  SLPTAEYAHRRGGFVVRQFTAYHTAFHAAADLKNVELTDTLLEMLNKQGKTPDIFILMQV 302

Query: 903  IRCYCHAGDIDRALQTFEDHVSSGRAIAAELFATLVEGAMVGYTEKGMQIAQDTLVKMNQ 1082
            IRCYCHAGDI+R LQ FE+H+   R++ AELF TL EGAMVGYTEKGMQ+AQD LV+MN+
Sbjct: 303  IRCYCHAGDIERGLQNFENHLRQDRSVPAELFVTLAEGAMVGYTEKGMQMAQDILVRMNE 362

Query: 1083 RNFFMYSKMGSELLLMAAGEKTGGYTLANYLWDLMRARNVYPSFPAVEAYYQGLKDRQIP 1262
            RN F+ +K+GSELL  AAGEKTGGY  ANY+WDLM+AR + PSFPAVEAYYQGLKDR+IP
Sbjct: 363  RNIFLNNKLGSELLFTAAGEKTGGYITANYIWDLMQARGITPSFPAVEAYYQGLKDREIP 422

Query: 1263 EDDPRLVMVSRMYDNLRLRFGNRVNLNV 1346
            EDDPRLV+VSR++ NL +RFGNR N+N+
Sbjct: 423  EDDPRLVLVSRIHKNLSVRFGNRTNINL 450


>ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Glycine max]
          Length = 450

 Score =  714 bits (1844), Expect = 0.0
 Identities = 343/448 (76%), Positives = 399/448 (89%)
 Frame = +3

Query: 3    FLQSLLAKTRFAGRVGSPCGVSGLRFFAASTEEYSKRNYANNVSEYNTVVGSLSAQRRNF 182
            FLQSL+A++R+A R      VSGLRFF+ STEEYSKRNYANNV+EYNTV+GSL+AQRRNF
Sbjct: 3    FLQSLIAQSRYAARTRPLNRVSGLRFFSVSTEEYSKRNYANNVAEYNTVLGSLTAQRRNF 62

Query: 183  LLRDVYDDMMLDGVKPNRDIFHSLVVGTMRGSRMQDAFFFMDQMKIMGMLPDVTLYNFLI 362
            LLRDVYDDMMLDGVKP RD FHSLVVGTM+G+RMQDAF+F++QMKIMG+LPDVTLYNFLI
Sbjct: 63   LLRDVYDDMMLDGVKPTRDTFHSLVVGTMKGARMQDAFYFVEQMKIMGLLPDVTLYNFLI 122

Query: 363  STCGKCKNSDQAIQILEEMKCMEVKPNVQTYICLLHACAAQGRIDRVYAIVRDMTAAGLG 542
            STCGKCKNS++AIQILEEMKCMEVKPN+QTYICLL+ACAA GRIDRVYAIVRDMTAAGLG
Sbjct: 123  STCGKCKNSNKAIQILEEMKCMEVKPNIQTYICLLNACAADGRIDRVYAIVRDMTAAGLG 182

Query: 543  LNKFCYAGLIVAHKNKTPVTDDFGEKVIEFVERSKIWXXXXXXXXXXXXXMIGVSDEELY 722
            LN+FCYAGLIVAHKNK P+ DDF  KVIEFVERSK+W             M+GV+DEELY
Sbjct: 183  LNEFCYAGLIVAHKNKKPLPDDFAAKVIEFVERSKMWSSVETNSANAENVMMGVTDEELY 242

Query: 723  NLPTAEYVNRRGGFLNRSFTAYHTAFNAAADLKNVGLTETLLEMLSREGKTPDVYIMMQV 902
            NLPTAEY +RRGGFL R FTAYHTAF+AAADLKNV LT+TLL+ML+++GKTPD++I+MQV
Sbjct: 243  NLPTAEYAHRRGGFLVRQFTAYHTAFHAAADLKNVELTDTLLDMLNKKGKTPDLFILMQV 302

Query: 903  IRCYCHAGDIDRALQTFEDHVSSGRAIAAELFATLVEGAMVGYTEKGMQIAQDTLVKMNQ 1082
            IRCYCHAGDI+R LQTFE+H+   R +A+ELF TL EGAM+GYTEKGMQ+AQD LV+MN+
Sbjct: 303  IRCYCHAGDIERGLQTFENHLRLDRPVASELFVTLAEGAMIGYTEKGMQMAQDVLVRMNE 362

Query: 1083 RNFFMYSKMGSELLLMAAGEKTGGYTLANYLWDLMRARNVYPSFPAVEAYYQGLKDRQIP 1262
            RN F+ +K+GSELL +AAGEKTGGYT ANY+WD+MRAR + PSFPAVEAYYQGLKDR+IP
Sbjct: 363  RNIFVNNKLGSELLFVAAGEKTGGYTTANYIWDMMRARGITPSFPAVEAYYQGLKDREIP 422

Query: 1263 EDDPRLVMVSRMYDNLRLRFGNRVNLNV 1346
            EDDPRLV+VS +Y+NL +RFGNR N+N+
Sbjct: 423  EDDPRLVLVSGIYNNLSVRFGNRANINL 450


>ref|XP_003618770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355493785|gb|AES74988.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 444

 Score =  687 bits (1774), Expect = 0.0
 Identities = 338/440 (76%), Positives = 377/440 (85%)
 Frame = +3

Query: 3    FLQSLLAKTRFAGRVGSPCGVSGLRFFAASTEEYSKRNYANNVSEYNTVVGSLSAQRRNF 182
            FLQSLL KTRFA R GS   VSG RF+    EEY++RNYA NV EYNTV+GSL+AQRR F
Sbjct: 3    FLQSLLGKTRFAVRNGSLPRVSGTRFYNVPAEEYNRRNYAKNVQEYNTVLGSLNAQRRIF 62

Query: 183  LLRDVYDDMMLDGVKPNRDIFHSLVVGTMRGSRMQDAFFFMDQMKIMGMLPDVTLYNFLI 362
            LLRDVY+DMMLDGV+P R+ FH+L VG+MRGSRM DAFFF DQMKIMG++PDVT YNFLI
Sbjct: 63   LLRDVYEDMMLDGVRPTRETFHALAVGSMRGSRMHDAFFFKDQMKIMGLVPDVTFYNFLI 122

Query: 363  STCGKCKNSDQAIQILEEMKCMEVKPNVQTYICLLHACAAQGRIDRVYAIVRDMTAAGLG 542
            STCGKCKNSDQA+QILEEMK MEVKPNVQTYICLLHACAAQGRIDRV  IVRDMTAAGLG
Sbjct: 123  STCGKCKNSDQAVQILEEMKSMEVKPNVQTYICLLHACAAQGRIDRVQIIVRDMTAAGLG 182

Query: 543  LNKFCYAGLIVAHKNKTPVTDDFGEKVIEFVERSKIWXXXXXXXXXXXXXMIGVSDEELY 722
            LNKF YAGLIVAH+NKTP+TDDF  KVIE+V RSK W             M+GV+DEELY
Sbjct: 183  LNKFSYAGLIVAHQNKTPLTDDFDAKVIEYVGRSKNWSSVETDSANAENVMVGVTDEELY 242

Query: 723  NLPTAEYVNRRGGFLNRSFTAYHTAFNAAADLKNVGLTETLLEMLSREGKTPDVYIMMQV 902
            NLPTAEYV RRGGFLNR FTAYHTAFNAAAD KNV LT+TLLEML +E KTPD+YI+MQV
Sbjct: 243  NLPTAEYVTRRGGFLNRPFTAYHTAFNAAADFKNVKLTDTLLEMLEKENKTPDIYIVMQV 302

Query: 903  IRCYCHAGDIDRALQTFEDHVSSGRAIAAELFATLVEGAMVGYTEKGMQIAQDTLVKMNQ 1082
            IRCYCHAG+IDR LQ FED ++ G+  AAE++ TL EGAMVGYTEKGMQI+ D L +MN+
Sbjct: 303  IRCYCHAGEIDRGLQFFEDFLALGKGNAAEIYVTLAEGAMVGYTEKGMQISIDILTRMNE 362

Query: 1083 RNFFMYSKMGSELLLMAAGEKTGGYTLANYLWDLMRARNVYPSFPAVEAYYQGLKDRQIP 1262
            RNFFM SKMGSELL+MAAGEKTGGYT ANY+WDLMRARN+YPS  AVEAYYQGLKDRQIP
Sbjct: 363  RNFFMNSKMGSELLIMAAGEKTGGYTNANYIWDLMRARNIYPSLAAVEAYYQGLKDRQIP 422

Query: 1263 EDDPRLVMVSRMYDNLRLRF 1322
            +DDPRL++V++MYDNLR RF
Sbjct: 423  QDDPRLMLVTQMYDNLRSRF 442


>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial [Vitis vinifera]
            gi|296087577|emb|CBI34833.3| unnamed protein product
            [Vitis vinifera]
          Length = 445

 Score =  628 bits (1619), Expect = e-177
 Identities = 302/419 (72%), Positives = 354/419 (84%)
 Frame = +3

Query: 69   GLRFFAASTEEYSKRNYANNVSEYNTVVGSLSAQRRNFLLRDVYDDMMLDGVKPNRDIFH 248
            G R+FAASTEEY+KRNYA+NVSEY TVV SL+AQRR+FLLRD YDDMMLDGV+P+RDIFH
Sbjct: 21   GRRYFAASTEEYAKRNYASNVSEYTTVVSSLTAQRRHFLLRDAYDDMMLDGVQPSRDIFH 80

Query: 249  SLVVGTMRGSRMQDAFFFMDQMKIMGMLPDVTLYNFLISTCGKCKNSDQAIQILEEMKCM 428
            SL+VGTM+G+R+QD+FFF+DQMK MG++PDV LYNFL+STCGKCKNSDQAI ILEEMK  
Sbjct: 81   SLIVGTMKGARLQDSFFFIDQMKTMGLVPDVALYNFLVSTCGKCKNSDQAIHILEEMKKN 140

Query: 429  EVKPNVQTYICLLHACAAQGRIDRVYAIVRDMTAAGLGLNKFCYAGLIVAHKNKTPVTDD 608
            EVKP  QTYICLL+ACAA GR DRVYAIVRDMTAAGLGLNKFCYAGLI AHKNK P+TDD
Sbjct: 141  EVKPTGQTYICLLNACAASGRTDRVYAIVRDMTAAGLGLNKFCYAGLIAAHKNKIPLTDD 200

Query: 609  FGEKVIEFVERSKIWXXXXXXXXXXXXXMIGVSDEELYNLPTAEYVNRRGGFLNRSFTAY 788
               K+IE VE+SK W             M+GVS+EELYN+PTAEYV+RR GFLNR  T Y
Sbjct: 201  TASKIIELVEQSKGWSSIEATRDMAENVMMGVSEEELYNIPTAEYVHRRAGFLNRQLTVY 260

Query: 789  HTAFNAAADLKNVGLTETLLEMLSREGKTPDVYIMMQVIRCYCHAGDIDRALQTFEDHVS 968
            H A +A ADL+NV   ETLLEML +EGKTPDV+++MQ +RCY H+G+IDR LQ FE++++
Sbjct: 261  HVALHAFADLRNVEAMETLLEMLKKEGKTPDVFLIMQTMRCYLHSGNIDRGLQIFEEYMN 320

Query: 969  SGRAIAAELFATLVEGAMVGYTEKGMQIAQDTLVKMNQRNFFMYSKMGSELLLMAAGEKT 1148
            SG+    EL+ TLVEGAMVGYT KGM++AQDTLVKMN R FF+  +MGSELLL+A+GEKT
Sbjct: 321  SGKPAMVELYVTLVEGAMVGYTPKGMELAQDTLVKMNARGFFLSPRMGSELLLVASGEKT 380

Query: 1149 GGYTLANYLWDLMRARNVYPSFPAVEAYYQGLKDRQIPEDDPRLVMVSRMYDNLRLRFG 1325
            GGYT ANY+WDLM+AR + PSFPAVEAYY GL++R+IPEDD RLV+VSR YDN RLRFG
Sbjct: 381  GGYTTANYIWDLMQARKITPSFPAVEAYYNGLREREIPEDDARLVLVSRAYDNQRLRFG 439


>ref|XP_004141120.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Cucumis sativus]
            gi|449489492|ref|XP_004158328.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g35850,
            mitochondrial-like [Cucumis sativus]
          Length = 442

 Score =  593 bits (1530), Expect = e-167
 Identities = 286/440 (65%), Positives = 351/440 (79%)
 Frame = +3

Query: 6    LQSLLAKTRFAGRVGSPCGVSGLRFFAASTEEYSKRNYANNVSEYNTVVGSLSAQRRNFL 185
            LQSL  ++R   R      +   R FA STEEY KRNYA+NV+EY TV+ SL+AQRR F 
Sbjct: 4    LQSLAGQSRSLVRF-----LGQRRSFAVSTEEYRKRNYADNVAEYKTVIASLTAQRRYFS 58

Query: 186  LRDVYDDMMLDGVKPNRDIFHSLVVGTMRGSRMQDAFFFMDQMKIMGMLPDVTLYNFLIS 365
            L DVYDDMMLDGV+P  D+FH L+ GTM+G+R Q AFFF D+MK MG++PDV+LYN LIS
Sbjct: 59   LTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLIS 118

Query: 366  TCGKCKNSDQAIQILEEMKCMEVKPNVQTYICLLHACAAQGRIDRVYAIVRDMTAAGLGL 545
             CGKC NS++A++IL+EM+  EVKPN QTYICLL+ACAA GR+DRVY IVRDMT+AGLGL
Sbjct: 119  LCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGL 178

Query: 546  NKFCYAGLIVAHKNKTPVTDDFGEKVIEFVERSKIWXXXXXXXXXXXXXMIGVSDEELYN 725
            NKFCYAGLI AH NK PV DDF  KV+EFVERSK W             M+GVS+EELYN
Sbjct: 179  NKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYN 238

Query: 726  LPTAEYVNRRGGFLNRSFTAYHTAFNAAADLKNVGLTETLLEMLSREGKTPDVYIMMQVI 905
            +PTAEYV+RRGGFLN+  T YH A NA A+LKNV + ET+++ML ++GKTPDVY++MQV+
Sbjct: 239  IPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVM 298

Query: 906  RCYCHAGDIDRALQTFEDHVSSGRAIAAELFATLVEGAMVGYTEKGMQIAQDTLVKMNQR 1085
            RCY H+GDIDR  + FE+H++SG +IA EL+ TLVEGAM+GYT KGMQ+AQ+TL  MN R
Sbjct: 299  RCYLHSGDIDRGHKAFEEHLNSGGSIAPELYTTLVEGAMIGYTPKGMQLAQETLENMNSR 358

Query: 1086 NFFMYSKMGSELLLMAAGEKTGGYTLANYLWDLMRARNVYPSFPAVEAYYQGLKDRQIPE 1265
             FF+  + GSELLL AAGEKTGGYT ANY+WDL+RAR + P FPAV+AYY+GLK R+IPE
Sbjct: 359  GFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPE 418

Query: 1266 DDPRLVMVSRMYDNLRLRFG 1325
            DDPRLV+V+R+++NL+ RFG
Sbjct: 419  DDPRLVLVTRIHENLQARFG 438