BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003652
         (1707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Gly...   331   3e-88
ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   316   1e-83
ref|XP_003538006.1| PREDICTED: RNA and export factor-binding pro...   315   2e-83
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   296   9e-78
ref|XP_002531375.1| RNA and export factor binding protein, putat...   293   7e-77

>ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
          Length = 243

 Score =  331 bits (849), Expect = 3e-88
 Identities = 182/255 (71%), Positives = 193/255 (75%)
 Frame = -2

Query: 1490 MSAALDMTLDDIIKNNKKXXXXXXXXXXXRAPGPGPSRRIPNRSANRAAPYTAAKAPETA 1311
            MSAALDMTL+DIIKNNKK            A GPGP+RR+PNR+ANRAAPY AAKAPETA
Sbjct: 1    MSAALDMTLEDIIKNNKKSSLANTRGRGR-ASGPGPARRLPNRAANRAAPYAAAKAPETA 59

Query: 1310 WQHDMYADQPAHVAAAYPGGQGGRASSIETGTKLYISNLDYGVSSDDIKELFSEVGDLKR 1131
            W+HDMYA+QP  VAAAYPGG   RASSIETGTKLYISNLDYGVS+DDIKELF EVGD+KR
Sbjct: 60   WKHDMYANQP--VAAAYPGG---RASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKR 114

Query: 1130 HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVELDGKPIKIEIVGTNIATHAVAPAA 951
            HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNV+LDGKP+K+EIVGTNIATHA  PA 
Sbjct: 115  HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHAAPPAV 174

Query: 950  NGAFGNLNGVPRSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSAEDL 771
            NG FGN  GVPRS Q                                   RDEKVSAEDL
Sbjct: 175  NGTFGNPTGVPRSGQ------GRSGSLGRPRGGSRGRGSIQRGRGRGRGGRDEKVSAEDL 228

Query: 770  DADLEKYHAEAMQLN 726
            DADLEKYHAEAMQLN
Sbjct: 229  DADLEKYHAEAMQLN 243


>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine max]
          Length = 247

 Score =  316 bits (810), Expect = 1e-83
 Identities = 173/255 (67%), Positives = 188/255 (73%)
 Frame = -2

Query: 1490 MSAALDMTLDDIIKNNKKXXXXXXXXXXXRAPGPGPSRRIPNRSANRAAPYTAAKAPETA 1311
            MSAA+DM+LDDIIKNNKK            + G GP+RR+PNR+ANRAAPY  AKAPE  
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPS-GSGPTRRLPNRAANRAAPYAPAKAPEAT 59

Query: 1310 WQHDMYADQPAHVAAAYPGGQGGRASSIETGTKLYISNLDYGVSSDDIKELFSEVGDLKR 1131
            WQHD+YADQ  HVAAA    QGGRA+SIETGTKLYISNLDYGVS+DDIKELF+EVGDLKR
Sbjct: 60   WQHDLYADQ--HVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKR 117

Query: 1130 HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVELDGKPIKIEIVGTNIATHAVAPAA 951
            H VHYDRSGRSKGTAEVVFSRRADAV+AVKRYNNV+LDGKP+KIEIVGTNI+T  VAPA 
Sbjct: 118  HAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPAP 177

Query: 950  NGAFGNLNGVPRSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSAEDL 771
            NGA GN NGVPRS Q                                   R EKVSA+DL
Sbjct: 178  NGAIGNFNGVPRSGQ-----GRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDL 232

Query: 770  DADLEKYHAEAMQLN 726
            DADLEKYHAEAMQLN
Sbjct: 233  DADLEKYHAEAMQLN 247


>ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine max]
          Length = 247

 Score =  315 bits (807), Expect = 2e-83
 Identities = 174/255 (68%), Positives = 186/255 (72%)
 Frame = -2

Query: 1490 MSAALDMTLDDIIKNNKKXXXXXXXXXXXRAPGPGPSRRIPNRSANRAAPYTAAKAPETA 1311
            MSAA+DM+LDDIIKNNKK            + G GPSRR PNR+ANRAAPY  AKAPE  
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPS-GSGPSRRFPNRAANRAAPYATAKAPEAT 59

Query: 1310 WQHDMYADQPAHVAAAYPGGQGGRASSIETGTKLYISNLDYGVSSDDIKELFSEVGDLKR 1131
            WQHD+YADQ    AA YP  QGGRA+SIETGTKLYISNLDYGVSSDDIKELF+EVGDLKR
Sbjct: 60   WQHDLYADQQV-AAAGYPA-QGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKR 117

Query: 1130 HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVELDGKPIKIEIVGTNIATHAVAPAA 951
            H VHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNV+LDGKP+KIEIVGTNI+T  VAPA 
Sbjct: 118  HAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPAR 177

Query: 950  NGAFGNLNGVPRSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSAEDL 771
            NGA GN +GVPRS Q                                   R EKVSA+DL
Sbjct: 178  NGAIGNFDGVPRSGQ-----GRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDL 232

Query: 770  DADLEKYHAEAMQLN 726
            DADLEKYHAEAMQLN
Sbjct: 233  DADLEKYHAEAMQLN 247


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
            gi|297746115|emb|CBI16171.3| unnamed protein product
            [Vitis vinifera]
          Length = 243

 Score =  296 bits (759), Expect = 9e-78
 Identities = 164/256 (64%), Positives = 182/256 (71%), Gaps = 1/256 (0%)
 Frame = -2

Query: 1490 MSAALDMTLDDIIKNNKKXXXXXXXXXXXRAPGPGPSRRIPNRSANRAAPYTAAKAPETA 1311
            MS ALDM+LDD+IKNNK+           R  GPGP+RR+PNR ANR  PY+ +KAPET 
Sbjct: 1    MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETT 60

Query: 1310 WQHDMYADQPAHVAAAYPGGQGGRASSIETGTKLYISNLDYGVSSDDIKELFSEVGDLKR 1131
            WQHDM+ADQ    AAAYP  Q GR S+IETGTKLYISNLDYGVS++DIKELFSEVGDLKR
Sbjct: 61   WQHDMFADQ----AAAYPA-QAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKR 115

Query: 1130 HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVELDGKPIKIEIVGTNIAT-HAVAPA 954
            +++HYDRSGRSKGTAEVVFSRR DAVAAVKRYNNV+LDGKP+KIEIVGTNIAT  AV P 
Sbjct: 116  YSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPV 175

Query: 953  ANGAFGNLNGVPRSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSAED 774
             NG FGN NG  RS Q                                   R EKVSAED
Sbjct: 176  TNGTFGNSNGGLRSAQ--------GRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAED 227

Query: 773  LDADLEKYHAEAMQLN 726
            LDADLEKYH+EAMQ+N
Sbjct: 228  LDADLEKYHSEAMQIN 243


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
            gi|223529035|gb|EEF31023.1| RNA and export factor binding
            protein, putative [Ricinus communis]
          Length = 247

 Score =  293 bits (751), Expect = 7e-77
 Identities = 160/255 (62%), Positives = 177/255 (69%)
 Frame = -2

Query: 1490 MSAALDMTLDDIIKNNKKXXXXXXXXXXXRAPGPGPSRRIPNRSANRAAPYTAAKAPETA 1311
            MS+ALDM+LDDIIK+NKK            + GPGP+RR  NR  NRAAPY AAKAPE+ 
Sbjct: 1    MSSALDMSLDDIIKSNKKPGSGNSRGRGRSS-GPGPTRRFNNRGTNRAAPYAAAKAPEST 59

Query: 1310 WQHDMYADQPAHVAAAYPGGQGGRASSIETGTKLYISNLDYGVSSDDIKELFSEVGDLKR 1131
            WQHDM+ DQ         GG G RAS IETGTKLYISNL+YGVS++DIKELFSEVGDLKR
Sbjct: 60   WQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKR 119

Query: 1130 HTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVELDGKPIKIEIVGTNIATHAVAPAA 951
            +++HYDRSGRSKGTAEVVFSRR DA+AAVKRYNNV+LDGKP+KIEIVGTNIAT A  PAA
Sbjct: 120  YSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATPAA 179

Query: 950  NGAFGNLNGVPRSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEKVSAEDL 771
            NG FGN NG PR  Q                                   R EKVSAEDL
Sbjct: 180  NGNFGNSNGAPRGGQ-------GRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDL 232

Query: 770  DADLEKYHAEAMQLN 726
            DADLEKYH+EAMQ N
Sbjct: 233  DADLEKYHSEAMQTN 247