BLASTX nr result

ID: Glycyrrhiza24_contig00003641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003641
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]        297   2e-78
ref|XP_003527743.1| PREDICTED: protein RCC2-like [Glycine max]        286   3e-75
ref|XP_004170845.1| PREDICTED: protein RCC2 homolog, partial [Cu...   278   1e-72
ref|XP_004147840.1| PREDICTED: protein RCC2 homolog [Cucumis sat...   278   1e-72
ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|2...   269   5e-70

>ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]
          Length = 538

 Score =  297 bits (761), Expect = 2e-78
 Identities = 145/176 (82%), Positives = 150/176 (85%)
 Frame = +2

Query: 302 LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVAAXXXXXXXXXXXXXXXXXX 481
           LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVA+                  
Sbjct: 24  LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVAS------------------ 65

Query: 482 XXXXXXGCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKVVKAGA 661
                 GCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYK+VKAG+
Sbjct: 66  ------GCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGS 119

Query: 662 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSEVKYITCGGDFT 829
           GRSHTVVVT+DGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSEVK+  CGGDFT
Sbjct: 120 GRSHTVVVTDDGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSEVKHTACGGDFT 175


>ref|XP_003527743.1| PREDICTED: protein RCC2-like [Glycine max]
          Length = 548

 Score =  286 bits (733), Expect = 3e-75
 Identities = 143/181 (79%), Positives = 149/181 (82%), Gaps = 5/181 (2%)
 Frame = +2

Query: 302 LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVAAXXXXXXXXXXXXXXXXXX 481
           LLFCGATCWDIIGRRKG VDGNLVSPSRLRPLVGVDIRYVA+                  
Sbjct: 24  LLFCGATCWDIIGRRKGAVDGNLVSPSRLRPLVGVDIRYVAS------------------ 65

Query: 482 XXXXXXGCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKVVKAGA 661
                 GCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYK+VKAG+
Sbjct: 66  ------GCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGS 119

Query: 662 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRN-----EIESSPVRCLVSEVKYITCGGDF 826
           GRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRN     +IESSPVRCLVS+VK+  CGGDF
Sbjct: 120 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRNGMLVFKIESSPVRCLVSDVKHTACGGDF 179

Query: 827 T 829
           T
Sbjct: 180 T 180


>ref|XP_004170845.1| PREDICTED: protein RCC2 homolog, partial [Cucumis sativus]
          Length = 186

 Score =  278 bits (711), Expect = 1e-72
 Identities = 133/176 (75%), Positives = 146/176 (82%)
 Frame = +2

Query: 302 LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVAAXXXXXXXXXXXXXXXXXX 481
           LLFCGAT WDIIGR+KGPV+GNLVSP+RLRPLVG+DIR+VA+                  
Sbjct: 23  LLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIRFVAS------------------ 64

Query: 482 XXXXXXGCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKVVKAGA 661
                 GC SCHCVALDVEGRCYTWGRNEKGQLGHGD IQRDRPT+VS+LSKYKVVKAGA
Sbjct: 65  ------GCTSCHCVALDVEGRCYTWGRNEKGQLGHGDLIQRDRPTIVSDLSKYKVVKAGA 118

Query: 662 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSEVKYITCGGDFT 829
           GR+HTVVVTEDGNSL+FGWNKHGQLGSGS++NEIESSPVRCLVSEVK   CGG+FT
Sbjct: 119 GRNHTVVVTEDGNSLSFGWNKHGQLGSGSIKNEIESSPVRCLVSEVKTTACGGEFT 174


>ref|XP_004147840.1| PREDICTED: protein RCC2 homolog [Cucumis sativus]
          Length = 543

 Score =  278 bits (711), Expect = 1e-72
 Identities = 133/176 (75%), Positives = 146/176 (82%)
 Frame = +2

Query: 302 LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVAAXXXXXXXXXXXXXXXXXX 481
           LLFCGAT WDIIGR+KGPV+GNLVSP+RLRPLVG+DIR+VA+                  
Sbjct: 23  LLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIRFVAS------------------ 64

Query: 482 XXXXXXGCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKVVKAGA 661
                 GC SCHCVALDVEGRCYTWGRNEKGQLGHGD IQRDRPT+VS+LSKYKVVKAGA
Sbjct: 65  ------GCTSCHCVALDVEGRCYTWGRNEKGQLGHGDLIQRDRPTIVSDLSKYKVVKAGA 118

Query: 662 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSEVKYITCGGDFT 829
           GR+HTVVVTEDGNSL+FGWNKHGQLGSGS++NEIESSPVRCLVSEVK   CGG+FT
Sbjct: 119 GRNHTVVVTEDGNSLSFGWNKHGQLGSGSIKNEIESSPVRCLVSEVKTTACGGEFT 174


>ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|222843721|gb|EEE81268.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  269 bits (688), Expect = 5e-70
 Identities = 132/176 (75%), Positives = 142/176 (80%)
 Frame = +2

Query: 302 LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVAAXXXXXXXXXXXXXXXXXX 481
           LLFCGATCWDIIGR+KG  +GNLVSP+RLRPLVGV+IR+VA+                  
Sbjct: 23  LLFCGATCWDIIGRKKGAQEGNLVSPTRLRPLVGVNIRFVAS------------------ 64

Query: 482 XXXXXXGCVSCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKVVKAGA 661
                 G  SCHCVALDVEGRCYTWGRNE+GQLGHGDTIQRDRPTVVSELSKYK++KAGA
Sbjct: 65  ------GSASCHCVALDVEGRCYTWGRNERGQLGHGDTIQRDRPTVVSELSKYKLIKAGA 118

Query: 662 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSVRNEIESSPVRCLVSEVKYITCGGDFT 829
           GRSHTVVVTEDG SLAFGWNKHGQLGSGS RNEIESSPVRCLVS+VK   CG DFT
Sbjct: 119 GRSHTVVVTEDGLSLAFGWNKHGQLGSGSARNEIESSPVRCLVSDVKTTACGADFT 174


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