BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003621
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539690.1| PREDICTED: RNA and export factor-binding pro...   281   3e-73
ref|XP_003538006.1| PREDICTED: RNA and export factor-binding pro...   277   4e-72
ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi...   270   5e-70
ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Gly...   254   4e-65
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...   249   2e-63

>ref|XP_003539690.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine max]
          Length = 247

 Score =  281 bits (719), Expect = 3e-73
 Identities = 156/253 (61%), Positives = 166/253 (65%), Gaps = 1/253 (0%)
 Frame = -2

Query: 1330 MSASLDMTLDDLIKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-ESTW 1154
            MSA++DM+LDD+IK+NKK                                      E+TW
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYAPAKAPEATW 60

Query: 1153 QHDMYADQHVAVAAYPAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHGV 974
            QHD+YADQHVA A YPAQGGRA SIETGTKLYISNLDYGVSNDDIKELF+EVGDLKRH V
Sbjct: 61   QHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAV 120

Query: 973  HYDRSGRSKGTAEVVFSRRVDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVPPVTNGA 794
            HYDRSGRSKGTAEVVFSRR DAV+AVKRYNNVQLDGKPMKIEIVGTNISTPGV P  NGA
Sbjct: 121  HYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPAPNGA 180

Query: 793  IGNSAGVPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESRDEKVSADDLDA 614
            IGN  GVP+S                                      R EKVSADDLDA
Sbjct: 181  IGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGG------GRGEKVSADDLDA 234

Query: 613  DLEKYHAEAMQLN 575
            DLEKYHAEAMQLN
Sbjct: 235  DLEKYHAEAMQLN 247


>ref|XP_003538006.1| PREDICTED: RNA and export factor-binding protein 2-like [Glycine max]
          Length = 247

 Score =  277 bits (709), Expect = 4e-72
 Identities = 155/253 (61%), Positives = 165/253 (65%), Gaps = 1/253 (0%)
 Frame = -2

Query: 1330 MSASLDMTLDDLIKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-ESTW 1154
            MSA++DM+LDD+IK+NKK                                      E+TW
Sbjct: 1    MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATW 60

Query: 1153 QHDMYADQHVAVAAYPAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHGV 974
            QHD+YADQ VA A YPAQGGRA SIETGTKLYISNLDYGVS+DDIKELF+EVGDLKRH V
Sbjct: 61   QHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAV 120

Query: 973  HYDRSGRSKGTAEVVFSRRVDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVPPVTNGA 794
            HYDRSGRSKGTAEVVFSRR DAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGV P  NGA
Sbjct: 121  HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPARNGA 180

Query: 793  IGNSAGVPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESRDEKVSADDLDA 614
            IGN  GVP+S                                      R EKVSADDLDA
Sbjct: 181  IGNFDGVPRS------GQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDA 234

Query: 613  DLEKYHAEAMQLN 575
            DLEKYHAEAMQLN
Sbjct: 235  DLEKYHAEAMQLN 247


>ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi|355507709|gb|AES88851.1|
            THO complex subunit [Medicago truncatula]
          Length = 376

 Score =  270 bits (691), Expect = 5e-70
 Identities = 144/203 (70%), Positives = 150/203 (73%), Gaps = 6/203 (2%)
 Frame = -2

Query: 1165 ESTWQHDMYADQHVAVAAYPA-QGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDL 989
            E+TWQHD+YADQHVA AAYPA QGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDL
Sbjct: 174  ETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDL 233

Query: 988  KRHGVHYDRSGRSKGTAEVVFSRRVDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVPP 809
            KRHGVHYDRSGRSKGTAEVVFSRR DAVAAVKRYNNVQLDGKPMKIEIVGTNISTPG  P
Sbjct: 234  KRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGAAP 293

Query: 808  VTNGAIGNSAGVPQS-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESRD 644
            V N  IGN  G+PQS                                           RD
Sbjct: 294  VVNAPIGNFNGIPQSGQGRVGEFRGPGGRGQGIRRNRGRGRGSGGPRGGGRGGGRGRGRD 353

Query: 643  EKVSADDLDADLEKYHAEAMQLN 575
            +KVSA+DLDA+LEKYHAEAMQLN
Sbjct: 354  DKVSAEDLDAELEKYHAEAMQLN 376


>ref|XP_003543506.1| PREDICTED: THO complex subunit 4-A-like [Glycine max]
          Length = 243

 Score =  254 bits (649), Expect = 4e-65
 Identities = 147/253 (58%), Positives = 159/253 (62%), Gaps = 1/253 (0%)
 Frame = -2

Query: 1330 MSASLDMTLDDLIKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-ESTW 1154
            MSA+LDMTL+D+IK+NKK                                      E+ W
Sbjct: 1    MSAALDMTLEDIIKNNKKSSLANTRGRGRASGPGPARRLPNRAANRAAPYAAAKAPETAW 60

Query: 1153 QHDMYADQHVAVAAYPAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHGV 974
            +HDMYA+Q VA AAYP  GGRA SIETGTKLYISNLDYGVSNDDIKELF EVGD+KRH V
Sbjct: 61   KHDMYANQPVA-AAYP--GGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKRHTV 117

Query: 973  HYDRSGRSKGTAEVVFSRRVDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVPPVTNGA 794
            HYDRSGRSKGTAEVVFSRR DAVAAVKRYNNVQLDGKPMK+EIVGTNI+T   PP  NG 
Sbjct: 118  HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHAAPPAVNGT 177

Query: 793  IGNSAGVPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESRDEKVSADDLDA 614
             GN  GVP+S                                      RDEKVSA+DLDA
Sbjct: 178  FGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRGRG-------GRDEKVSAEDLDA 230

Query: 613  DLEKYHAEAMQLN 575
            DLEKYHAEAMQLN
Sbjct: 231  DLEKYHAEAMQLN 243


>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
            gi|297746115|emb|CBI16171.3| unnamed protein product
            [Vitis vinifera]
          Length = 243

 Score =  249 bits (635), Expect = 2e-63
 Identities = 145/255 (56%), Positives = 160/255 (62%), Gaps = 3/255 (1%)
 Frame = -2

Query: 1330 MSASLDMTLDDLIKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--EST 1157
            MS +LDM+LDDLIK+NK+                                       E+T
Sbjct: 1    MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETT 60

Query: 1156 WQHDMYADQHVAVAAYPAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHG 977
            WQHDM+ADQ    AAYPAQ GR  +IETGTKLYISNLDYGVSN+DIKELFSEVGDLKR+ 
Sbjct: 61   WQHDMFADQ---AAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYS 117

Query: 976  VHYDRSGRSKGTAEVVFSRRVDAVAAVKRYNNVQLDGKPMKIEIVGTNISTP-GVPPVTN 800
            +HYDRSGRSKGTAEVVFSRR DAVAAVKRYNNVQLDGKPMKIEIVGTNI+TP  VPPVTN
Sbjct: 118  IHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTN 177

Query: 799  GAIGNSAGVPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESRDEKVSADDL 620
            G  GNS G  +S                                      R EKVSA+DL
Sbjct: 178  GTFGNSNGGLRS---------AQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDL 228

Query: 619  DADLEKYHAEAMQLN 575
            DADLEKYH+EAMQ+N
Sbjct: 229  DADLEKYHSEAMQIN 243