BLASTX nr result

ID: Glycyrrhiza24_contig00003611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003611
         (1644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556156.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   745   0.0  
ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula] g...   744   0.0  
ref|XP_003536417.1| PREDICTED: 60S ribosomal protein L3-like [Gl...   744   0.0  
gb|ACU21362.1| unknown [Glycine max]                                  739   0.0  
ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|1...   725   0.0  

>ref|XP_003556156.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  745 bits (1924), Expect = 0.0
 Identities = 361/389 (92%), Positives = 374/389 (96%)
 Frame = +1

Query: 61   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREV 240
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSK PKLTAFLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 241  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEEVKRRFYK 420
            EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVW QHLSEE+KRRFYK
Sbjct: 61   EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 421  NWCXXXXXXXXXXXXQYETEEGKKNIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 600
            NWC            QYETEEGKKNI++QLEKLKKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 601  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 780
            IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 781  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKAGDESHAALT 960
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKK+YKLGKAGDESH+ALT
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 961  EFDRTEKDITPMGGFPHYGIVKDDYLMIKGGCVGPKKRVITLRQSLLKQTTRVALEDIKL 1140
            EFDRTEKDITP+GGFPHYG+VKDDY+M+KG CVGPKKRVITLRQSLLKQT+RVALE+IKL
Sbjct: 301  EFDRTEKDITPIGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 1141 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1227
            KFIDTSSKFGHGRFQTTQEKQKF+GRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389


>ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula]
            gi|355481132|gb|AES62335.1| L3 Ribosomal protein
            [Medicago truncatula]
          Length = 455

 Score =  744 bits (1922), Expect = 0.0
 Identities = 361/389 (92%), Positives = 373/389 (95%)
 Frame = +1

Query: 61   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREV 240
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDP+KPPKLTAFLGYKAGMTHIVREV
Sbjct: 67   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 126

Query: 241  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEEVKRRFYK 420
            EKPGSKLHKKETCEPVTIIETPPMV+VGVVGYVKTPRGLRTLNTVWTQHLSEE+KRRFYK
Sbjct: 127  EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 186

Query: 421  NWCXXXXXXXXXXXXQYETEEGKKNIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 600
            NWC            QYE++EGKKNIQ+QLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 187  NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 246

Query: 601  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 780
            IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 247  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 306

Query: 781  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKAGDESHAALT 960
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGK G+E+H A T
Sbjct: 307  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 366

Query: 961  EFDRTEKDITPMGGFPHYGIVKDDYLMIKGGCVGPKKRVITLRQSLLKQTTRVALEDIKL 1140
            EFDRTEKDITPMGGFPHYGIVK+D+LMIKGGCVGPKKRVITLRQSLLKQT+R+ALEDIKL
Sbjct: 367  EFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKL 426

Query: 1141 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1227
            KFIDTSSKFGHGRFQTT EKQKFYGRLKA
Sbjct: 427  KFIDTSSKFGHGRFQTTSEKQKFYGRLKA 455


>ref|XP_003536417.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
          Length = 389

 Score =  744 bits (1920), Expect = 0.0
 Identities = 360/389 (92%), Positives = 374/389 (96%)
 Frame = +1

Query: 61   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREV 240
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSK PKLTAFLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 241  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEEVKRRFYK 420
            EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVW QHLSEE+KRRFYK
Sbjct: 61   EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 421  NWCXXXXXXXXXXXXQYETEEGKKNIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 600
            NWC            QYETEEGKKNI++QLEKLKKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 601  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 780
            IMEIQVNGG+IAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  IMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 781  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKAGDESHAALT 960
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKK+YKLGKAGDESH+ALT
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 961  EFDRTEKDITPMGGFPHYGIVKDDYLMIKGGCVGPKKRVITLRQSLLKQTTRVALEDIKL 1140
            EFDRTEKDITPMGGFPHYG+VKDD++M+KG CVGPKKRVITLRQSLLKQT+RVALE+IKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDFIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 1141 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1227
            KFIDTSSKFGHGRFQTTQEKQKF+GRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389


>gb|ACU21362.1| unknown [Glycine max]
          Length = 389

 Score =  739 bits (1908), Expect = 0.0
 Identities = 359/389 (92%), Positives = 372/389 (95%)
 Frame = +1

Query: 61   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREV 240
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSK PKLTAFLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 241  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEEVKRRFYK 420
            EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVW QHLSEE+KRRFYK
Sbjct: 61   EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 421  NWCXXXXXXXXXXXXQYETEEGKKNIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 600
            NWC            QYETEEGKKNI++QLEKLKKYATV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 601  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 780
            IMEIQVNGGTIAQKVDFAYSF EKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  IMEIQVNGGTIAQKVDFAYSFLEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 781  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKAGDESHAALT 960
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKK+YKLGKAGDESH+ALT
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 961  EFDRTEKDITPMGGFPHYGIVKDDYLMIKGGCVGPKKRVITLRQSLLKQTTRVALEDIKL 1140
            EFDRTEKDITP+GGFPHYG+VKDDY+M+KG CVG KKRVITLRQSLLKQT+RVALE+IKL
Sbjct: 301  EFDRTEKDITPIGGFPHYGVVKDDYIMVKGCCVGLKKRVITLRQSLLKQTSRVALEEIKL 360

Query: 1141 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1227
            KFIDTSSKFGHGRFQTTQEKQKF+GRLKA
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389


>ref|XP_002306708.1| predicted protein [Populus trichocarpa] gi|118481111|gb|ABK92509.1|
            unknown [Populus trichocarpa] gi|222856157|gb|EEE93704.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  725 bits (1872), Expect = 0.0
 Identities = 348/389 (89%), Positives = 368/389 (94%)
 Frame = +1

Query: 61   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREV 240
            MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDP+KP KLT+FLGYKAGMTHIVREV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPTKPCKLTSFLGYKAGMTHIVREV 60

Query: 241  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWTQHLSEEVKRRFYK 420
            EKPGSKLHKKETCE VTI+ETPPMVIVGVVGY+KTP GLRTLNTVW QHLSEEVKRRFYK
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 421  NWCXXXXXXXXXXXXQYETEEGKKNIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 600
            NWC            QYET+EGKK+IQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 601  IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 780
            +MEIQVNGGTIAQKVDFAY FFEKQVPIDAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240

Query: 781  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKAGDESHAALT 960
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYK+GK G E+H A+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKVGQETHTAIT 300

Query: 961  EFDRTEKDITPMGGFPHYGIVKDDYLMIKGGCVGPKKRVITLRQSLLKQTTRVALEDIKL 1140
            E+DRTEKDITP+GGFPHYG+VKDDYLMIKG CVGPKKRV+TLRQSLLKQT+R+ALE+IKL
Sbjct: 301  EYDRTEKDITPLGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360

Query: 1141 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 1227
            KF+DTSSKFGHGRFQTTQEKQKFYGRLKA
Sbjct: 361  KFVDTSSKFGHGRFQTTQEKQKFYGRLKA 389


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