BLASTX nr result

ID: Glycyrrhiza24_contig00003536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003536
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630471.1| Protein tolB [Medicago truncatula] gi|355524...   204   2e-50
ref|XP_003527947.1| PREDICTED: uncharacterized protein LOC100791...   196   6e-48
emb|CAN73514.1| hypothetical protein VITISV_037210 [Vitis vinifera]   172   7e-41
ref|XP_002285876.2| PREDICTED: uncharacterized protein LOC100267...   171   1e-40
ref|XP_002285877.1| PREDICTED: uncharacterized protein LOC100267...   171   1e-40

>ref|XP_003630471.1| Protein tolB [Medicago truncatula] gi|355524493|gb|AET04947.1|
           Protein tolB [Medicago truncatula]
          Length = 684

 Score =  204 bits (519), Expect = 2e-50
 Identities = 109/170 (64%), Positives = 126/170 (74%), Gaps = 17/170 (10%)
 Frame = +2

Query: 284 GRAFYAFDIYSLPIHNP--HQELRITDGHSVNFNGHFLSN----------NQTSIQLVYV 427
           GR  YAFDIYSLPIH+   HQEL++TDGHSVNFNG FL N          +   +QLVYV
Sbjct: 40  GRPDYAFDIYSLPIHHHYHHQELQLTDGHSVNFNGQFLPNLTSIKLLTHQDPPPLQLVYV 99

Query: 428 TERNGFPSIYYDAVYPTTTQKRFRSALEISNRVQFPLLPPNQV-----VSMKDKPSVSSD 592
           TER GFP+IYYDAVY TTT+        I++R+Q PLLP +       +S+KDKPS+SSD
Sbjct: 100 TERTGFPTIYYDAVYTTTTK--------INDRIQLPLLPNHLTQTQSQLSIKDKPSLSSD 151

Query: 593 GEFLIYVSTHEDPGVPRASWAAVYSTHLKSGLTVRLTPYGVADFSPALSP 742
           G++LIYVSTHEDPGV R SW AVYSTHLKSG T RLTPYGVADFSPA+SP
Sbjct: 152 GQYLIYVSTHEDPGVQRVSWTAVYSTHLKSGNTRRLTPYGVADFSPAVSP 201


>ref|XP_003527947.1| PREDICTED: uncharacterized protein LOC100791865 [Glycine max]
          Length = 723

 Score =  196 bits (497), Expect = 6e-48
 Identities = 103/171 (60%), Positives = 125/171 (73%), Gaps = 18/171 (10%)
 Frame = +2

Query: 284 GRAFYAFDIYSLPIH---------NPHQELRITDGHSVNFNGHFLSNNQT--------SI 412
           GRA YAFDIYSLP+          +P QEL +TDGHSVNFNGHFLSN+           +
Sbjct: 73  GRASYAFDIYSLPVPVQQQQQQPLSPSQELLLTDGHSVNFNGHFLSNSSAIQLPKHSPPL 132

Query: 413 QLVYVTERNGFPSIYYDAVYPTTTQKRFRSALEISNRVQFPLLPPN-QVVSMKDKPSVSS 589
           QLVYVTERNG+P+I+YDA+Y         S+  +SNR+Q PLL  +    S+KDKPSV+ 
Sbjct: 133 QLVYVTERNGYPTIFYDAIY---------SSSMVSNRIQIPLLSNHLSDASIKDKPSVTP 183

Query: 590 DGEFLIYVSTHEDPGVPRASWAAVYSTHLKSGLTVRLTPYGVADFSPALSP 742
           DG++L+YVS+HE+PGVPRASW AVYST L+SGLT RLTPYGVADFSP+LSP
Sbjct: 184 DGQYLLYVSSHENPGVPRASWTAVYSTQLESGLTQRLTPYGVADFSPSLSP 234


>emb|CAN73514.1| hypothetical protein VITISV_037210 [Vitis vinifera]
          Length = 715

 Score =  172 bits (436), Expect = 7e-41
 Identities = 102/181 (56%), Positives = 119/181 (65%), Gaps = 28/181 (15%)
 Frame = +2

Query: 284 GRAFYAFDIYSLPIHNPH---QELRITDGHSVNFNGHFLSN-------NQT--------- 406
           GR+ YAFD++SLP   P     ELRITDG SVNFNGHF S+       NQT         
Sbjct: 48  GRSDYAFDVFSLPTLGPSTIADELRITDGQSVNFNGHFPSSPIISLLANQTLLESSSVKR 107

Query: 407 ---SIQLVYVTERNGFPSIYYDAVY-PTTTQKRFRSALEISNRVQFPLLPPNQV-----V 559
              S+Q +YVTERNG  +IY D +Y  T T  R RSALE + RV+ PLL  N       +
Sbjct: 108 PDESLQTIYVTERNGSSNIYLDIIYYDTPTNSRRRSALETAVRVEVPLLGTNTEQSDGRI 167

Query: 560 SMKDKPSVSSDGEFLIYVSTHEDPGVPRASWAAVYSTHLKSGLTVRLTPYGVADFSPALS 739
           SMKD+PS+   GE L+YVSTHED GVPR SWAAVYSTHL +G T RLTPYGVAD+SPA+S
Sbjct: 168 SMKDRPSLV--GEXLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVS 225

Query: 740 P 742
           P
Sbjct: 226 P 226


>ref|XP_002285876.2| PREDICTED: uncharacterized protein LOC100267814 isoform 1 [Vitis
           vinifera]
          Length = 715

 Score =  171 bits (434), Expect = 1e-40
 Identities = 102/181 (56%), Positives = 119/181 (65%), Gaps = 28/181 (15%)
 Frame = +2

Query: 284 GRAFYAFDIYSLPIHNPH---QELRITDGHSVNFNGHFLSN-------NQT--------- 406
           GR+ YAFD++SLP   P     ELRITDG SVNFNGHF S+       NQT         
Sbjct: 48  GRSDYAFDVFSLPTLGPSTIADELRITDGQSVNFNGHFPSSPIISLLANQTLVESSSVKR 107

Query: 407 ---SIQLVYVTERNGFPSIYYDAVY-PTTTQKRFRSALEISNRVQFPLLPPNQV-----V 559
              S+Q +YVTERNG  +IY D +Y  T T  R RSALE + RV+ PLL  N       +
Sbjct: 108 PDESLQTIYVTERNGSSNIYLDIIYYDTPTNSRRRSALETAVRVEVPLLGTNTEQSDGRI 167

Query: 560 SMKDKPSVSSDGEFLIYVSTHEDPGVPRASWAAVYSTHLKSGLTVRLTPYGVADFSPALS 739
           SMKD+PS+   GE L+YVSTHED GVPR SWAAVYSTHL +G T RLTPYGVAD+SPA+S
Sbjct: 168 SMKDRPSLV--GEDLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVS 225

Query: 740 P 742
           P
Sbjct: 226 P 226


>ref|XP_002285877.1| PREDICTED: uncharacterized protein LOC100267814 isoform 2 [Vitis
           vinifera]
          Length = 680

 Score =  171 bits (434), Expect = 1e-40
 Identities = 102/181 (56%), Positives = 119/181 (65%), Gaps = 28/181 (15%)
 Frame = +2

Query: 284 GRAFYAFDIYSLPIHNPH---QELRITDGHSVNFNGHFLSN-------NQT--------- 406
           GR+ YAFD++SLP   P     ELRITDG SVNFNGHF S+       NQT         
Sbjct: 13  GRSDYAFDVFSLPTLGPSTIADELRITDGQSVNFNGHFPSSPIISLLANQTLVESSSVKR 72

Query: 407 ---SIQLVYVTERNGFPSIYYDAVY-PTTTQKRFRSALEISNRVQFPLLPPNQV-----V 559
              S+Q +YVTERNG  +IY D +Y  T T  R RSALE + RV+ PLL  N       +
Sbjct: 73  PDESLQTIYVTERNGSSNIYLDIIYYDTPTNSRRRSALETAVRVEVPLLGTNTEQSDGRI 132

Query: 560 SMKDKPSVSSDGEFLIYVSTHEDPGVPRASWAAVYSTHLKSGLTVRLTPYGVADFSPALS 739
           SMKD+PS+   GE L+YVSTHED GVPR SWAAVYSTHL +G T RLTPYGVAD+SPA+S
Sbjct: 133 SMKDRPSLV--GEDLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVS 190

Query: 740 P 742
           P
Sbjct: 191 P 191


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