BLASTX nr result

ID: Glycyrrhiza24_contig00003505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003505
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42470.1| unknown [Lotus japonicus]                              489   e-136
ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, ...   462   e-128
ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, ...   460   e-127
gb|ACU23891.1| unknown [Glycine max]                                  460   e-127
ref|XP_003595341.1| Chlorophyll a-b binding protein [Medicago tr...   452   e-124

>gb|AFK42470.1| unknown [Lotus japonicus]
          Length = 259

 Score =  489 bits (1259), Expect = e-136
 Identities = 233/256 (91%), Positives = 239/256 (93%)
 Frame = +2

Query: 122 FPNRELIRQKVFSERTATATATTWLSRRTFRIATNAKKGVSDVCEPLPPDRPLWFPGSSP 301
           FPN E  R KVF ERTAT     WL RR   I TNAKKGVSDVCEPLPPDRPLWFPGSSP
Sbjct: 13  FPNTEK-RHKVFPERTAT-----WLPRR---IHTNAKKGVSDVCEPLPPDRPLWFPGSSP 63

Query: 302 PQWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLERMGYVE 481
           P+WLDGSLPGDFGFDP+GLGSDPELLKW AQAELMHARWAMLGVSGILIPELLE+MGYVE
Sbjct: 64  PEWLDGSLPGDFGFDPIGLGSDPELLKWLAQAELMHARWAMLGVSGILIPELLEKMGYVE 123

Query: 482 NYSWYEAGTREYFADPTTLFIVQLGLMGWVEGRRWADMVNPGSVDIEPKLPNRPNPKPDV 661
           NYSWYEAGT+EYFADPTTLFIVQL LMGWVEGRRWAD+VNPGSVDIEPKLPNRPNPKPDV
Sbjct: 124 NYSWYEAGTQEYFADPTTLFIVQLALMGWVEGRRWADLVNPGSVDIEPKLPNRPNPKPDV 183

Query: 662 GYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAH 841
           GYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTG+GPIENLMAH
Sbjct: 184 GYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGQGPIENLMAH 243

Query: 842 LADPGHCNIFSAFTSR 889
           LADPGHCNIFSAFTSR
Sbjct: 244 LADPGHCNIFSAFTSR 259


>ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  462 bits (1190), Expect = e-128
 Identities = 218/253 (86%), Positives = 232/253 (91%)
 Frame = +2

Query: 125 PNRELIRQKVFSERTATATATTWLSRRTFRIATNAKKGVSDVCEPLPPDRPLWFPGSSPP 304
           PNRE IRQK F ERT T  +   L+RRT     NA KGVS VCEPLPPDRPLWFPGSSPP
Sbjct: 14  PNRE-IRQKGFPERTPTCLS---LTRRTI---ANATKGVSAVCEPLPPDRPLWFPGSSPP 66

Query: 305 QWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLERMGYVEN 484
           +WLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMH+RWAML V GIL+PELLER+GY+EN
Sbjct: 67  EWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLAVFGILVPELLERIGYIEN 126

Query: 485 YSWYEAGTREYFADPTTLFIVQLGLMGWVEGRRWADMVNPGSVDIEPKLPNRPNPKPDVG 664
           +SWY+AGTREYF DPTTLF+VQ+GLMGWVEGRRWAD+VNPGSVDIEPK+P+  NPKPDVG
Sbjct: 127 FSWYDAGTREYFVDPTTLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVG 186

Query: 665 YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHL 844
           YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHL
Sbjct: 187 YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHL 246

Query: 845 ADPGHCNIFSAFT 883
           ADPGHCNIFSAFT
Sbjct: 247 ADPGHCNIFSAFT 259


>ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Glycine max]
          Length = 260

 Score =  460 bits (1183), Expect = e-127
 Identities = 217/253 (85%), Positives = 231/253 (91%)
 Frame = +2

Query: 125 PNRELIRQKVFSERTATATATTWLSRRTFRIATNAKKGVSDVCEPLPPDRPLWFPGSSPP 304
           PNRE IRQK F +RT T  +   L+RRT   AT   KGVS VCEPLPPDRPLWFPGSSPP
Sbjct: 14  PNRE-IRQKGFPDRTPTCLS---LTRRTVAYAT---KGVSAVCEPLPPDRPLWFPGSSPP 66

Query: 305 QWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLERMGYVEN 484
           +WLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAML V GIL+PELLE++GY+EN
Sbjct: 67  EWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVFGILVPELLEKIGYIEN 126

Query: 485 YSWYEAGTREYFADPTTLFIVQLGLMGWVEGRRWADMVNPGSVDIEPKLPNRPNPKPDVG 664
           +SWY+AG REYF DPTTLF+VQ+GLMGWVEGRRWADMVNPGSVDIEPK+P+  NPKPDVG
Sbjct: 127 FSWYDAGAREYFVDPTTLFVVQMGLMGWVEGRRWADMVNPGSVDIEPKVPHITNPKPDVG 186

Query: 665 YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHL 844
           YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHL
Sbjct: 187 YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHL 246

Query: 845 ADPGHCNIFSAFT 883
           ADPGHCNIFSAFT
Sbjct: 247 ADPGHCNIFSAFT 259


>gb|ACU23891.1| unknown [Glycine max]
          Length = 260

 Score =  460 bits (1183), Expect = e-127
 Identities = 217/253 (85%), Positives = 231/253 (91%)
 Frame = +2

Query: 125 PNRELIRQKVFSERTATATATTWLSRRTFRIATNAKKGVSDVCEPLPPDRPLWFPGSSPP 304
           PNRE IRQK F ERT T  +   L+RRT     NA KGVS VCEPLPPDRPLWFPGSSPP
Sbjct: 14  PNRE-IRQKGFPERTPTCLS---LTRRTI---ANATKGVSAVCEPLPPDRPLWFPGSSPP 66

Query: 305 QWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLERMGYVEN 484
           +WLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMH+RWAML V GIL+PELLER+GY+EN
Sbjct: 67  EWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHSRWAMLAVFGILVPELLERIGYIEN 126

Query: 485 YSWYEAGTREYFADPTTLFIVQLGLMGWVEGRRWADMVNPGSVDIEPKLPNRPNPKPDVG 664
           +SWY+AGTREYF DPTTLF+VQ+GLMGWVEGRRWAD+VNPGSVDIEPK+P+  NPKPDVG
Sbjct: 127 FSWYDAGTREYFVDPTTLFVVQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVG 186

Query: 665 YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHL 844
           YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNG LAMLAFVGFWFQAIYTGEGPIENLMAHL
Sbjct: 187 YPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGGLAMLAFVGFWFQAIYTGEGPIENLMAHL 246

Query: 845 ADPGHCNIFSAFT 883
           ADPGHCNIFSAFT
Sbjct: 247 ADPGHCNIFSAFT 259


>ref|XP_003595341.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355484389|gb|AES65592.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 267

 Score =  452 bits (1162), Expect = e-124
 Identities = 217/268 (80%), Positives = 233/268 (86%)
 Frame = +2

Query: 83  MALAIXXXXXXXXFPNRELIRQKVFSERTATATATTWLSRRTFRIATNAKKGVSDVCEPL 262
           MALAI        FPNRE+  QKV  + T + T+    SRR      NAKKGVSDVCEPL
Sbjct: 1   MALAISSTSLSS-FPNREIC-QKVLHQGTTSTTSWLSSSRRRRLTIRNAKKGVSDVCEPL 58

Query: 263 PPDRPLWFPGSSPPQWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGI 442
           PPDRPLWFPGSSPP+WLDGSLPG+FGFDPLGLGSDPELLKW AQAELMHARWAMLGVSGI
Sbjct: 59  PPDRPLWFPGSSPPEWLDGSLPGNFGFDPLGLGSDPELLKWLAQAELMHARWAMLGVSGI 118

Query: 443 LIPELLERMGYVENYSWYEAGTREYFADPTTLFIVQLGLMGWVEGRRWADMVNPGSVDIE 622
           LIPE+LE++GYV+N+SWY AG+ EYFADPTTLFIVQL LMGWVEGRRWAD+VNPGSVDIE
Sbjct: 119 LIPEILEKIGYVKNFSWYNAGSVEYFADPTTLFIVQLALMGWVEGRRWADIVNPGSVDIE 178

Query: 623 PKLPNRPNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAI 802
           PKLPNRPNPKPDVGYPGGLWFDPM WGRGSPEPVMVLRTKEIKNGRLAMLAF+GF FQA+
Sbjct: 179 PKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCFQAV 238

Query: 803 YTGEGPIENLMAHLADPGHCNIFSAFTS 886
           Y G  PI+NLMAHLADPGH NIFSAFTS
Sbjct: 239 YVGGSPIDNLMAHLADPGHVNIFSAFTS 266


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