BLASTX nr result

ID: Glycyrrhiza24_contig00003493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003493
         (1596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula...   147   8e-33
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062...   133   1e-28
ref|XP_003524344.1| PREDICTED: uncharacterized protein LOC100802...   130   1e-27
ref|XP_003533338.1| PREDICTED: uncharacterized protein LOC100788...   116   1e-23
ref|XP_003530057.1| PREDICTED: uncharacterized protein LOC100776...   101   6e-19

>ref|XP_003631087.1| HMG-Y-related protein A [Medicago truncatula]
           gi|92870991|gb|ABE80152.1| High mobility group proteins
           HMG-I and HMG-Y; Linker histone, N-terminal [Medicago
           truncatula] gi|355525109|gb|AET05563.1| HMG-Y-related
           protein A [Medicago truncatula]
          Length = 422

 Score =  147 bits (371), Expect = 8e-33
 Identities = 83/157 (52%), Positives = 95/157 (60%), Gaps = 6/157 (3%)
 Frame = -3

Query: 895 GLKRRPGRPPKIQSQPTVIXXXXXXXXXXXXXXXXXXXRKNXXXXXXXXXXXXXXXXXXX 716
           GLKRRPGRPPK QS PT +                    ++                   
Sbjct: 185 GLKRRPGRPPKTQSHPTTVIPFAAAPAPSVVSDEANVSVRSTRPRGRPKKYSDTVVPGAG 244

Query: 715 XP------KLAVVGRPKNPSGRPVGRPKGAKASSTARKAADEDLRGKLEYFQSKVKESLD 554
                   KLAVVGRPKNPSGRP+GRPKGAK     +K  +EDLR KLE+FQSKVKESLD
Sbjct: 245 ATRRGRPKKLAVVGRPKNPSGRPIGRPKGAKG----KKFVNEDLRRKLEHFQSKVKESLD 300

Query: 553 VLKPYFDHESPVTAIAAIQELEILSALDLKAPLRDVT 443
           +LKP FDH+SP TA+AAIQELE+L+ LDLKAPLRD T
Sbjct: 301 ILKPLFDHQSPATAVAAIQELEMLATLDLKAPLRDET 337



 Score =  104 bits (260), Expect = 6e-20
 Identities = 51/63 (80%), Positives = 55/63 (87%)
 Frame = -3

Query: 1390 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 1211
            HPPYAEMIY+AIEALKEKDGSSKRAIGKYIE  Y+ +LPPE  HSTLL QHL HLKS GL
Sbjct: 27   HPPYAEMIYKAIEALKEKDGSSKRAIGKYIEHVYKQVLPPE--HSTLLTQHLNHLKSAGL 84

Query: 1210 LVM 1202
            L+M
Sbjct: 85   LIM 87


>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
           I/Y like protein [Glycine max]
          Length = 413

 Score =  133 bits (335), Expect = 1e-28
 Identities = 71/90 (78%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
 Frame = -3

Query: 709 KLAVVGRPKNPSGRPVGRPKGAKASS-TARKAADEDLRGKLEYFQSKVKESLDVLKPYFD 533
           KLAV GRPKNP+ RPVGRPKG+ A++ TA KAA++DLR KLE+FQSKVKESL  LKPYF+
Sbjct: 291 KLAV-GRPKNPARRPVGRPKGSTAAAITAHKAANDDLRRKLEHFQSKVKESLGTLKPYFN 349

Query: 532 HESPVTAIAAIQELEILSALDLKAPLRDVT 443
           HESPVTAIAAIQELE+LS LDLKAPLRD T
Sbjct: 350 HESPVTAIAAIQELEVLSTLDLKAPLRDET 379



 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 44/64 (68%), Positives = 48/64 (75%)
 Frame = -3

Query: 1390 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 1211
            HPPY EMIY AI ALKEKDGSSKRAIGKY+EQ Y+ L    P HS LL  HL  LKS GL
Sbjct: 34   HPPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYKDL---PPTHSALLTHHLNRLKSAGL 90

Query: 1210 LVMV 1199
            L++V
Sbjct: 91   LILV 94


>ref|XP_003524344.1| PREDICTED: uncharacterized protein LOC100802941 [Glycine max]
          Length = 383

 Score =  130 bits (327), Expect = 1e-27
 Identities = 71/90 (78%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
 Frame = -3

Query: 709 KLAVVGRPKNPSGRPVGRPKGAKASS-TARKAADEDLRGKLEYFQSKVKESLDVLKPYFD 533
           KLAV GR KNP  RPVGRPKG+ A++ TA KAA+EDLR KLE+FQSKVKESL  LKPYF+
Sbjct: 256 KLAV-GRSKNPVRRPVGRPKGSTAAAITAHKAANEDLRKKLEHFQSKVKESLGTLKPYFN 314

Query: 532 HESPVTAIAAIQELEILSALDLKAPLRDVT 443
           HESPVTAIAAIQELE+LS LDLKAPLRD T
Sbjct: 315 HESPVTAIAAIQELEVLSTLDLKAPLRDET 344



 Score = 84.3 bits (207), Expect = 8e-14
 Identities = 44/64 (68%), Positives = 48/64 (75%)
 Frame = -3

Query: 1390 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 1211
            HPPY EMIY AI ALKE+DGSSKRAIGKYIEQ Y+ L P  PA   LL  HL  LKS+ L
Sbjct: 9    HPPYDEMIYTAIGALKERDGSSKRAIGKYIEQVYKDLPPTHPA---LLTHHLNRLKSSAL 65

Query: 1210 LVMV 1199
            LV+V
Sbjct: 66   LVLV 69


>ref|XP_003533338.1| PREDICTED: uncharacterized protein LOC100788215 [Glycine max]
          Length = 477

 Score =  116 bits (291), Expect = 1e-23
 Identities = 58/84 (69%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = -3

Query: 691 RPKNPSGRPVGRPK-GAKASSTARKAADEDLRGKLEYFQSKVKESLDVLKPYFDHESPVT 515
           +P+ P  RPVGRPK G+ ++ST++ AA+EDLR KLE+FQSKVKESL VLKP+F+HESPVT
Sbjct: 295 QPRKPGARPVGRPKKGSTSASTSQNAANEDLRRKLEHFQSKVKESLAVLKPHFNHESPVT 354

Query: 514 AIAAIQELEILSALDLKAPLRDVT 443
           AIAAIQELE+L  +DL  PLRD T
Sbjct: 355 AIAAIQELEVLGTMDLNVPLRDET 378



 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 49/64 (76%), Positives = 49/64 (76%)
 Frame = -3

Query: 1390 HPPYAEMIYRAIEALKEKDGSSKRAIGKYIEQAYRGLLPPEPAHSTLLAQHLKHLKSTGL 1211
            HPPYAEMIY AIEALKEKDGSSKRAI KYIEQ Y  L    P HS LL QHL HLKS GL
Sbjct: 38   HPPYAEMIYTAIEALKEKDGSSKRAIAKYIEQVYTQL---PPNHSDLLTQHLNHLKSRGL 94

Query: 1210 LVMV 1199
            L MV
Sbjct: 95   LQMV 98


>ref|XP_003530057.1| PREDICTED: uncharacterized protein LOC100776248 [Glycine max]
          Length = 219

 Score =  101 bits (251), Expect = 6e-19
 Identities = 50/70 (71%), Positives = 61/70 (87%)
 Frame = -3

Query: 652 KGAKASSTARKAADEDLRGKLEYFQSKVKESLDVLKPYFDHESPVTAIAAIQELEILSAL 473
           +G+ ++ST + AA+EDLR KLE+FQSKVKESL VLKP+F+HESPVTAIAAIQELE+L  +
Sbjct: 58  EGSTSASTTQNAANEDLRRKLEHFQSKVKESLAVLKPHFNHESPVTAIAAIQELEVLGTM 117

Query: 472 DLKAPLRDVT 443
           DL APLRD T
Sbjct: 118 DLNAPLRDET 127


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