BLASTX nr result

ID: Glycyrrhiza24_contig00003429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003429
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloro...    69   2e-09
ref|XP_003540558.1| PREDICTED: 50S ribosomal protein L12, chloro...    68   4e-09
ref|XP_004141094.1| PREDICTED: 50S ribosomal protein L12, chloro...    67   8e-09
ref|XP_002298536.1| predicted protein [Populus trichocarpa] gi|1...    67   8e-09
ref|XP_004142800.1| PREDICTED: 50S ribosomal protein L12, chloro...    67   1e-08

>ref|XP_003537765.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Glycine
           max]
          Length = 188

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 36/49 (73%), Positives = 37/49 (75%)
 Frame = -1

Query: 597 EEKTEFDVVIEEVPSNXXXXXXXXXXXITNLGLKEAKELIEGLPKKFKE 451
           EEKTEFDVVIEEVPSN           +TNL LKEAKELIEGLPKKFKE
Sbjct: 116 EEKTEFDVVIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKE 164


>ref|XP_003540558.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Glycine
           max]
          Length = 190

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 35/49 (71%), Positives = 37/49 (75%)
 Frame = -1

Query: 597 EEKTEFDVVIEEVPSNXXXXXXXXXXXITNLGLKEAKELIEGLPKKFKE 451
           EEKTEFDV+IEEVPSN           +TNL LKEAKELIEGLPKKFKE
Sbjct: 118 EEKTEFDVLIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKE 166


>ref|XP_004141094.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 191

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 35/49 (71%), Positives = 37/49 (75%)
 Frame = -1

Query: 597 EEKTEFDVVIEEVPSNXXXXXXXXXXXITNLGLKEAKELIEGLPKKFKE 451
           EEKTEFDVVIEEVPSN           +T+L LKEAKELIEGLPKKFKE
Sbjct: 119 EEKTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKE 167


>ref|XP_002298536.1| predicted protein [Populus trichocarpa] gi|118483906|gb|ABK93843.1|
           unknown [Populus trichocarpa]
           gi|222845794|gb|EEE83341.1| predicted protein [Populus
           trichocarpa]
          Length = 187

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 35/49 (71%), Positives = 37/49 (75%)
 Frame = -1

Query: 597 EEKTEFDVVIEEVPSNXXXXXXXXXXXITNLGLKEAKELIEGLPKKFKE 451
           EEKTEFDVVIEEVPSN           +T+L LKEAKELIEGLPKKFKE
Sbjct: 115 EEKTEFDVVIEEVPSNVRIAVIKSVRALTSLALKEAKELIEGLPKKFKE 163


>ref|XP_004142800.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 183

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 53/135 (39%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
 Frame = -1

Query: 849 LHFPPTKTTTLSHRATRLRRIAAVS--EKVEKLGXXXXXXXXXXXXXXXXXXXXXXXXXX 676
           L F PT       R T LR IAAVS  EK+EKLG                          
Sbjct: 26  LSFRPTTLQFPYRRPTHLRPIAAVSAPEKIEKLGSDISSLTLEEARLLVDFLQDKLGVSA 85

Query: 675 XXXXXXXXXXXXXXXXXXXXXXXXXVEEKTEFDVVIEEVPSNXXXXXXXXXXXITNLGLK 496
                                     EEKTEFDVVIE+VPSN           +T+L LK
Sbjct: 86  AAFAPAAVVAAPGGAVGGEAAAEAV-EEKTEFDVVIEDVPSNARIAVIKSVRAMTSLALK 144

Query: 495 EAKELIEGLPKKFKE 451
           EAKELIEGLPKKFKE
Sbjct: 145 EAKELIEGLPKKFKE 159


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