BLASTX nr result

ID: Glycyrrhiza24_contig00003424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003424
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycin...   342   1e-91
ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycin...   337   3e-90
gb|AFK45592.1| unknown [Medicago truncatula]                          307   5e-81
ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max] gi|73...   267   4e-69
ref|XP_003538145.1| PREDICTED: histone deacetylase HDT1-like [Gl...   265   2e-68

>ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycine max]
            gi|255644846|gb|ACU22923.1| unknown [Glycine max]
          Length = 307

 Score =  342 bits (878), Expect = 1e-91
 Identities = 187/305 (61%), Positives = 203/305 (66%), Gaps = 8/305 (2%)
 Frame = +1

Query: 220  MEFWGAEVKVGDVVKVDPSEFEACIHLSQAALGEAKKDKGNEPVVLYLKVGDQKFVLGTL 399
            MEFWGAEVKVG+ VKVDP+EFEACIHLSQAALGEAKKDK NEPVVLYLKVG QKFVLGTL
Sbjct: 1    MEFWGAEVKVGESVKVDPAEFEACIHLSQAALGEAKKDKSNEPVVLYLKVGQQKFVLGTL 60

Query: 400  SREKIPQVSLELVLEKEFELSHNSKSASVYFCGYKAYY-PGXXXXXXXXXXXXXXIPLAI 576
            SREKIPQ+ LELVLEKEFELSHNSK+ASV+FCGYKA+Y  G              +PL  
Sbjct: 61   SREKIPQIPLELVLEKEFELSHNSKNASVHFCGYKAFYDTGDDSEEDEFTDSEEDVPLLK 120

Query: 577  AENGKPETXXXXXXXXXXXXADAKSGVGAKQVKVVDPKKXXXXXXXXXXXXXXXXXXXXX 756
            AENGKPET            A AK+   AKQVK+V+PKK                     
Sbjct: 121  AENGKPETKAEELKVPESKKAVAKASASAKQVKIVEPKKDNEEDSDDDSDEDDDFGSSDE 180

Query: 757  XXXXXXXXXXXXXXXXXXXXXXXTPP-KKVDQGKKRPNESASKTPVSTKKAKNATPEKSD 933
                                    P  KK D GKKRPNESASKTPVS+KKAKNATPEK+D
Sbjct: 181  EMEDADSDSDDESDDKEDDDEETHPKNKKADLGKKRPNESASKTPVSSKKAKNATPEKTD 240

Query: 934  GKKTGHTATPHPMKKGGKAPNSEAKDQTPKS------GGQFSCKSCSKAFNSEGGLQQHN 1095
            GKK GHTATPHP KKGGK P+SEAK +TP +       G  SCKSCSK+FNSE GLQQHN
Sbjct: 241  GKKGGHTATPHPAKKGGKTPSSEAKAKTPNNEAKTPMSGGLSCKSCSKSFNSESGLQQHN 300

Query: 1096 KAKHG 1110
            KAKHG
Sbjct: 301  KAKHG 305


>ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycine max]
            gi|255641453|gb|ACU21002.1| unknown [Glycine max]
          Length = 306

 Score =  337 bits (865), Expect = 3e-90
 Identities = 190/309 (61%), Positives = 206/309 (66%), Gaps = 12/309 (3%)
 Frame = +1

Query: 220  MEFWGAEVKVGDVVKVDPSEFEACIHLSQAALGEAKKDKGNEPVVLYLKVGDQKFVLGTL 399
            MEFWGAEVKVG+ VKVDP+EFEACIHLSQAALGEAKKDK  EPVVLY+KVG+QKFVLGTL
Sbjct: 1    MEFWGAEVKVGESVKVDPAEFEACIHLSQAALGEAKKDKP-EPVVLYMKVGEQKFVLGTL 59

Query: 400  SREKIPQVSLELVLEKEFELSHNSKSASVYFCGYKAYYP---GXXXXXXXXXXXXXXIPL 570
            SREKIPQ+SLELVLEKEFELSH+SKSASV+FCGYKAYY                   +PL
Sbjct: 60   SREKIPQISLELVLEKEFELSHSSKSASVHFCGYKAYYDADNSDEDEFTDSDEDDEDVPL 119

Query: 571  AIAENGKPETXXXXXXXXXXXXADAKSGVGAKQVKVVDPKKXXXXXXXXXXXXXXXXXXX 750
               ENGKPET            A AK+   AKQVKVV+PKK                   
Sbjct: 120  INTENGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEPKK---DNEEDSDDDSDDDDFG 176

Query: 751  XXXXXXXXXXXXXXXXXXXXXXXXXTPPKKVDQGKKRPNESASKTPVSTKKAKNATPEKS 930
                                     TPPKKVD GKKRPNESASKTPVS+KKAKNATPEK+
Sbjct: 177  SSDEEMEDADSDSDDESGDEDDDEETPPKKVDLGKKRPNESASKTPVSSKKAKNATPEKT 236

Query: 931  DGKKTGHTATPHPMKKGG---------KAPNSEAKDQTPKSGGQFSCKSCSKAFNSEGGL 1083
            DGKK GHTATPHP KKGG         K PNSEAK +TPKSGG  SCK+CSK+F +E GL
Sbjct: 237  DGKKGGHTATPHPAKKGGKTPNREAKAKTPNSEAKAKTPKSGG-LSCKTCSKSFTNESGL 295

Query: 1084 QQHNKAKHG 1110
            QQHNKAKHG
Sbjct: 296  QQHNKAKHG 304


>gb|AFK45592.1| unknown [Medicago truncatula]
          Length = 302

 Score =  307 bits (786), Expect = 5e-81
 Identities = 175/308 (56%), Positives = 197/308 (63%), Gaps = 10/308 (3%)
 Frame = +1

Query: 220  MEFWGAEVKVGDVVKVDPSEFEAC-IHLSQAALGEAKKDKGNEPVVLYLKVGDQKFVLGT 396
            MEFWGAEVKVG+ +K+DP + EA  IH+SQ ALGEAKKDK NE VV+YLKVG+QK VLGT
Sbjct: 1    MEFWGAEVKVGETIKIDPYDLEAAAIHISQVALGEAKKDKPNESVVIYLKVGEQKLVLGT 60

Query: 397  LSREKIPQVSLELVLEKEFELSHNSKSASVYFCGYKAYYP--GXXXXXXXXXXXXXXIPL 570
            L+++KIPQ+SL++VLEKEFELSHNSK+ASV+FCGYKAYY                  IPL
Sbjct: 61   LTKDKIPQISLDIVLEKEFELSHNSKAASVHFCGYKAYYEDNDDSEEEGETDSEDEDIPL 120

Query: 571  AIAE-NGKPETXXXXXXXXXXXXAD------AKSGVGAKQVKVVDPKKXXXXXXXXXXXX 729
               E NGKPE             AD      AK+   AK VKVVDPK             
Sbjct: 121  ITTEQNGKPEPKAEELKVSEPKKADAKNAAPAKNAATAKHVKVVDPK----DEDSDDDDE 176

Query: 730  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPPKKVDQGKKRPNESASKTPVSTKKAK 909
                                            TP KKVDQGKKRPNESASKTP+S+KK+K
Sbjct: 177  SDDEIGSSDDEMENADSDSEDEDDSDEDDEEETPVKKVDQGKKRPNESASKTPISSKKSK 236

Query: 910  NATPEKSDGKKTGHTATPHPMKKGGKAPNSEAKDQTPKSGGQFSCKSCSKAFNSEGGLQQ 1089
            NATPEK+DGKK GHTATPHP KKGGK PNS+AK  TPKSGG  SC SCSK FNSE GL Q
Sbjct: 237  NATPEKTDGKKAGHTATPHP-KKGGKTPNSDAK--TPKSGGGLSCSSCSKTFNSETGLTQ 293

Query: 1090 HNKAKHGA 1113
            H+KAKHGA
Sbjct: 294  HSKAKHGA 301


>ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max]
            gi|73919939|sp|Q8LJS2.1|HDT1_SOYBN RecName: Full=Histone
            deacetylase HDT1; AltName: Full=Histone deacetylase 2a;
            Short=HD2a; AltName: Full=Nucleolar histone deacetylase
            HD2-p39 gi|22597156|gb|AAN03465.1| nucleolar histone
            deacetylase HD2-P39 [Glycine max]
          Length = 295

 Score =  267 bits (683), Expect = 4e-69
 Identities = 156/300 (52%), Positives = 176/300 (58%), Gaps = 3/300 (1%)
 Frame = +1

Query: 220  MEFWGAEVKVGDVVKVDPSE-FEACIHLSQAALGEAKKDKGNEPVVLYLKVGDQKFVLGT 396
            MEFWG EVKVG  V VDP +  ++ IH+SQ ALGEAKKDK NEPVVLYLKVG+QK VLGT
Sbjct: 1    MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 397  LSREKIPQVSLELVLEKEFELSHNSKSASVYFCGYKAYYPGXXXXXXXXXXXXXXIPLAI 576
            LSR+ IP +SL+LVL+ + ELSH SKSASV+FCGYK    G                LA+
Sbjct: 61   LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVL-TGNDNASDFSDSSEEDEELAL 119

Query: 577  A--ENGKPETXXXXXXXXXXXXADAKSGVGAKQVKVVDPKKXXXXXXXXXXXXXXXXXXX 750
               +NGKPE             +  K G  AK     DPKK                   
Sbjct: 120  EGQDNGKPELKAEGAKVTKPSKSIPKIGAPAK---AADPKKDEDDDSDDESDDDLAGEDE 176

Query: 751  XXXXXXXXXXXXXXXXXXXXXXXXXTPPKKVDQGKKRPNESASKTPVSTKKAKNATPEKS 930
                                     TP KKVDQGKKRPNESA+KTP+S KKAK ATPEK+
Sbjct: 177  SGSSDEMDDDSNSEEESDGDDEE--TPAKKVDQGKKRPNESAAKTPISAKKAKTATPEKT 234

Query: 931  DGKKTGHTATPHPMKKGGKAPNSEAKDQTPKSGGQFSCKSCSKAFNSEGGLQQHNKAKHG 1110
            DGKK+ H ATPHP KKGGK PNS  K QTP S GQ SC SC K+F +E GLQQH KAKHG
Sbjct: 235  DGKKSVHVATPHPSKKGGKTPNS-TKGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHG 293


>ref|XP_003538145.1| PREDICTED: histone deacetylase HDT1-like [Glycine max]
          Length = 295

 Score =  265 bits (677), Expect = 2e-68
 Identities = 152/299 (50%), Positives = 173/299 (57%), Gaps = 1/299 (0%)
 Frame = +1

Query: 217  PMEFWGAEVKVGDVVKVDPSE-FEACIHLSQAALGEAKKDKGNEPVVLYLKVGDQKFVLG 393
            PMEFWG EVKVG  V VDP +  ++ IH+SQ ALGEAKK+K NE VVLYLKVG+QK VLG
Sbjct: 4    PMEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKEKPNESVVLYLKVGEQKIVLG 63

Query: 394  TLSREKIPQVSLELVLEKEFELSHNSKSASVYFCGYKAYYPGXXXXXXXXXXXXXXIPLA 573
            TLSR+ IP +SL+LVL+ + ELSH SKSASV+FCGY+    G              + L 
Sbjct: 64   TLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYRVLTGGNNASDFSDSEEDEELALE 123

Query: 574  IAENGKPETXXXXXXXXXXXXADAKSGVGAKQVKVVDPKKXXXXXXXXXXXXXXXXXXXX 753
              +NGKPE                K G  AK     DPKK                    
Sbjct: 124  GQDNGKPEIKDEGAKVTKPSKPVPKIGAPAK---TADPKKDEGDDSDDESDDDLAGEDEF 180

Query: 754  XXXXXXXXXXXXXXXXXXXXXXXXTPPKKVDQGKKRPNESASKTPVSTKKAKNATPEKSD 933
                                    TP KKVDQGKKRPNESA+KTPVS KKAK ATPEK++
Sbjct: 181  GSSDEMDDDSDSDEESDEE-----TPAKKVDQGKKRPNESAAKTPVSAKKAKTATPEKTN 235

Query: 934  GKKTGHTATPHPMKKGGKAPNSEAKDQTPKSGGQFSCKSCSKAFNSEGGLQQHNKAKHG 1110
            GKK  H ATPHP KKGGK PNS  K Q+P S GQ SC SC K+F +E GLQQH KAKHG
Sbjct: 236  GKKNVHVATPHPSKKGGKTPNS-TKGQSPSSAGQLSCASCKKSFTNEVGLQQHKKAKHG 293


Top