BLASTX nr result

ID: Glycyrrhiza24_contig00003405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003405
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU20250.1| unknown [Glycine max]                                  188   3e-45
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...   184   4e-44
ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [M...   184   4e-44
gb|AFK39781.1| unknown [Medicago truncatula]                          181   2e-43
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   179   2e-42

>gb|ACU20250.1| unknown [Glycine max]
          Length = 270

 Score =  188 bits (477), Expect = 3e-45
 Identities = 89/92 (96%), Positives = 91/92 (98%)
 Frame = +3

Query: 231 PLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRYGEDAAE 410
           PLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLP+NYYTGEPRGFGFVKYRYGEDAAE
Sbjct: 46  PLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAE 105

Query: 411 AKQHLNHTIIGGREIRIVFAEENRKTPQEMRL 506
           AKQHLNHTIIGGREIRIVFAEENRKT QEMR+
Sbjct: 106 AKQHLNHTIIGGREIRIVFAEENRKTSQEMRV 137



 Score = 70.9 bits (172), Expect(2) = 1e-10
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = +1

Query: 691 PVVGRSTGGPLIPGRMAGVLMTGRIRHPADLKALGVIIAVLQDLVLGHTVHADL 852
           P  GR+T  PL+ GRM GVLMT RIRHPAD + LG +IAVLQ L+ G T HADL
Sbjct: 197 PSGGRTTRSPLVSGRMVGVLMTRRIRHPADPRVLGTMIAVLQGLIHGDTFHADL 250



 Score = 22.3 bits (46), Expect(2) = 1e-10
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 866 DFVVLNLVFPMGTYC 910
           D+ V+N VFP+ T+C
Sbjct: 255 DWKVVNSVFPVTTHC 269


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510621|gb|AES91763.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score =  184 bits (467), Expect = 4e-44
 Identities = 88/92 (95%), Positives = 90/92 (97%)
 Frame = +3

Query: 231 PLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRYGEDAAE 410
           PLPSGLLVRNLPLDARPEDLR PFERYGPVKDVYLPRNYYTGEPRGFGFVKYR+GEDAAE
Sbjct: 45  PLPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAE 104

Query: 411 AKQHLNHTIIGGREIRIVFAEENRKTPQEMRL 506
           AKQ LNHTIIGGREIRIVFAEENRKTPQEMR+
Sbjct: 105 AKQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136


>ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
           gi|355510620|gb|AES91762.1| Splicing factor,
           arginine/serine-rich 13A [Medicago truncatula]
          Length = 314

 Score =  184 bits (467), Expect = 4e-44
 Identities = 88/92 (95%), Positives = 90/92 (97%)
 Frame = +3

Query: 231 PLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRYGEDAAE 410
           PLPSGLLVRNLPLDARPEDLR PFERYGPVKDVYLPRNYYTGEPRGFGFVKYR+GEDAAE
Sbjct: 45  PLPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAE 104

Query: 411 AKQHLNHTIIGGREIRIVFAEENRKTPQEMRL 506
           AKQ LNHTIIGGREIRIVFAEENRKTPQEMR+
Sbjct: 105 AKQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136


>gb|AFK39781.1| unknown [Medicago truncatula]
          Length = 336

 Score =  181 bits (460), Expect = 2e-43
 Identities = 87/92 (94%), Positives = 89/92 (96%)
 Frame = +3

Query: 231 PLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRYGEDAAE 410
           PLPSGLLVRNLPLDARPEDLR PFERYGPVKDVYLPRNYYTGEPRGFGFVKYR+GEDAA 
Sbjct: 45  PLPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAG 104

Query: 411 AKQHLNHTIIGGREIRIVFAEENRKTPQEMRL 506
           AKQ LNHTIIGGREIRIVFAEENRKTPQEMR+
Sbjct: 105 AKQQLNHTIIGGREIRIVFAEENRKTPQEMRV 136



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = +1

Query: 691 PVVGRSTGGPLIPGRMAGVLMTGRIRHPADLKALGVIIAVLQDLVLGHTVHADLP*SM 864
           P+V R+  GP +P RMA V +  RI   ADL+A GV+IAVLQ LV GHTVHAD   SM
Sbjct: 263 PLVSRTREGPPVPRRMAEVQLMRRIWCLADLQAPGVMIAVLQGLVHGHTVHADFLPSM 320


>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  179 bits (453), Expect = 2e-42
 Identities = 83/92 (90%), Positives = 89/92 (96%)
 Frame = +3

Query: 231 PLPSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRYGEDAAE 410
           P PSGLLVRNLPLDARPEDLRIPFER+GPVKDVYLP+NYYTGEPRGFGFVK+R+ EDAAE
Sbjct: 47  PAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAE 106

Query: 411 AKQHLNHTIIGGREIRIVFAEENRKTPQEMRL 506
           AKQ LNHT+IGGREIRIVFAEENRKTPQEMR+
Sbjct: 107 AKQQLNHTVIGGREIRIVFAEENRKTPQEMRV 138


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