BLASTX nr result

ID: Glycyrrhiza24_contig00003402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00003402
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32330.3| unnamed protein product [Vitis vinifera]              190   2e-46
ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Me...   189   4e-46
ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containin...   187   1e-45
ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ...   186   3e-45
ref|XP_002304049.1| predicted protein [Populus trichocarpa] gi|2...   186   3e-45

>emb|CBI32330.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score =  190 bits (483), Expect = 2e-46
 Identities = 94/96 (97%), Positives = 94/96 (97%)
 Frame = -2

Query: 559 LVKMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSV 380
           L  MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSV
Sbjct: 42  LFNMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSV 101

Query: 379 RNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 272
           RNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 102 RNCFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 137


>ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula]
           gi|355500846|gb|AES82049.1| SnRNP core Sm protein
           Sm-X5-like protein [Medicago truncatula]
           gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus]
          Length = 93

 Score =  189 bits (480), Expect = 4e-46
 Identities = 93/93 (100%), Positives = 93/93 (100%)
 Frame = -2

Query: 550 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 371
           MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 370 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 272
           FIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 61  FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 93


>ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis
           vinifera]
          Length = 489

 Score =  187 bits (476), Expect = 1e-45
 Identities = 92/94 (97%), Positives = 93/94 (98%)
 Frame = -2

Query: 553 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 374
           + LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 396 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 455

Query: 373 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 272
           CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG
Sbjct: 456 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 489


>ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
           gi|223535995|gb|EEF37654.1| Speckle-type POZ protein,
           putative [Ricinus communis]
          Length = 500

 Score =  186 bits (473), Expect = 3e-45
 Identities = 91/94 (96%), Positives = 93/94 (98%)
 Frame = -2

Query: 553 KMLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 374
           + LFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN
Sbjct: 407 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 466

Query: 373 CFIRGSVVRYVQLPPEGVDIELLHDATRREARGG 272
           CFIRGSVVRYVQLPPEGVDI+LLHDATRREARGG
Sbjct: 467 CFIRGSVVRYVQLPPEGVDIDLLHDATRREARGG 500


>ref|XP_002304049.1| predicted protein [Populus trichocarpa]
           gi|224118384|ref|XP_002331469.1| predicted protein
           [Populus trichocarpa] gi|118484877|gb|ABK94305.1|
           unknown [Populus trichocarpa]
           gi|222841481|gb|EEE79028.1| predicted protein [Populus
           trichocarpa] gi|222873547|gb|EEF10678.1| predicted
           protein [Populus trichocarpa]
          Length = 93

 Score =  186 bits (473), Expect = 3e-45
 Identities = 90/93 (96%), Positives = 93/93 (100%)
 Frame = -2

Query: 550 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 371
           MLFFSYFKDLVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 370 FIRGSVVRYVQLPPEGVDIELLHDATRREARGG 272
           FIRGSVVRYVQLPPEGVD++LLHDATRREARGG
Sbjct: 61  FIRGSVVRYVQLPPEGVDVDLLHDATRREARGG 93


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